RNA–Protein interactions for RNA: ENST00000465768.1

SAMM50-202, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 169 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-202ENST00000465768 AEBP2Q6ZN18 517 aaPredicted RBP21.59■■□□□ 1.05
SAMM50-202ENST00000465768 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
SAMM50-202ENST00000465768 SENP3Q9H4L4 574 aaPredicted RBP18.55■□□□□ 0.56
SAMM50-202ENST00000465768 PHF23Q9BUL5 403 aaPredicted RBP18.2■□□□□ 0.5
SAMM50-202ENST00000465768 FOXD1Q16676 465 aa17.2■□□□□ 0.34
SAMM50-202ENST00000465768 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
SAMM50-202ENST00000465768 MSH5O43196 834 aa16.23■□□□□ 0.19
SAMM50-202ENST00000465768 PIAS4Q8N2W9 510 aaPredicted RBP16.11■□□□□ 0.17
SAMM50-202ENST00000465768 PPP6R1Q9UPN7 881 aa15.97■□□□□ 0.15
SAMM50-202ENST00000465768 ADRA2BP18089 450 aa15.94■□□□□ 0.14
SAMM50-202ENST00000465768 POTEDQ86YR6 584 aa15.84■□□□□ 0.13
SAMM50-202ENST00000465768 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
SAMM50-202ENST00000465768 DMRT2Q9Y5R5 561 aa14.68□□□□□ -0.06
SAMM50-202ENST00000465768 MAPK8IP2Q13387 824 aaPredicted RBP14.62□□□□□ -0.07
SAMM50-202ENST00000465768 PPP4R3CPQ6ZMV5 832 aa14.32□□□□□ -0.12
SAMM50-202ENST00000465768 HOXD11P31277 338 aaPredicted RBP14.11□□□□□ -0.15
SAMM50-202ENST00000465768 CNKSR2Q8WXI2 1034 aa14.11□□□□□ -0.15
SAMM50-202ENST00000465768 DCAF8L1A6NGE4 600 aa14.03□□□□□ -0.16
SAMM50-202ENST00000465768 RNF216Q9NWF9 866 aaPredicted RBP14□□□□□ -0.17
SAMM50-202ENST00000465768 CACNB1Q02641 598 aaPredicted RBP13.89□□□□□ -0.19
SAMM50-202ENST00000465768 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
SAMM50-202ENST00000465768 RNF39Q9H2S5 420 aa13.79□□□□□ -0.2
SAMM50-202ENST00000465768 DNAJC5BQ9UF47 199 aa13.71□□□□□ -0.21
SAMM50-202ENST00000465768 C1QBPQ07021 282 aaKnown RBP13.62□□□□□ -0.23
SAMM50-202ENST00000465768 NPM3O75607 178 aaKnown RBP13.56□□□□□ -0.24
SAMM50-202ENST00000465768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.26
SAMM50-202ENST00000465768 KCNA4P22459 653 aa13.22□□□□□ -0.29
SAMM50-202ENST00000465768 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
SAMM50-202ENST00000465768 CAPN15O75808 1086 aa12.94□□□□□ -0.34
SAMM50-202ENST00000465768 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
SAMM50-202ENST00000465768 SPINK5Q9NQ38 1064 aaPredicted RBP12.92□□□□□ -0.34
SAMM50-202ENST00000465768 APLP2Q06481 763 aa12.9□□□□□ -0.34
SAMM50-202ENST00000465768 DSG3P32926 999 aa12.87□□□□□ -0.35
SAMM50-202ENST00000465768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.84□□□□□ -0.35
SAMM50-202ENST00000465768 HNRNPUL2Q1KMD3 747 aaKnown RBP12.84□□□□□ -0.35
SAMM50-202ENST00000465768 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
SAMM50-202ENST00000465768 SAMD1Q6SPF0 538 aaPredicted RBP12.74□□□□□ -0.37
SAMM50-202ENST00000465768 TRHP20396 242 aaPredicted RBP12.7□□□□□ -0.38
SAMM50-202ENST00000465768 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
SAMM50-202ENST00000465768 ABCB7O75027 752 aa12.6□□□□□ -0.39
SAMM50-202ENST00000465768 SLC4A1APQ9BWU0 796 aaKnown RBP12.51□□□□□ -0.41
SAMM50-202ENST00000465768 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
SAMM50-202ENST00000465768 POTEHQ6S545 545 aa12.42□□□□□ -0.42
SAMM50-202ENST00000465768 RBM42Q9BTD8 480 aaKnown RBP12.39□□□□□ -0.43
SAMM50-202ENST00000465768 POLA2Q14181 598 aa12.34□□□□□ -0.43
SAMM50-202ENST00000465768 ZBTB12Q9Y330 459 aaPredicted RBP12.22□□□□□ -0.45
SAMM50-202ENST00000465768 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
SAMM50-202ENST00000465768 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
SAMM50-202ENST00000465768 ZBTB22O15209 634 aa12.13□□□□□ -0.47
SAMM50-202ENST00000465768 ATXN8OSP0DMR3 200 aa12.09□□□□□ -0.47
SAMM50-202ENST00000465768 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
SAMM50-202ENST00000465768 AKT1S1Q96B36 256 aa12.04□□□□□ -0.48
SAMM50-202ENST00000465768 OSCARQ8IYS5 282 aa11.98□□□□□ -0.49
SAMM50-202ENST00000465768 CSRNP3Q8WYN3 585 aa11.94□□□□□ -0.5
SAMM50-202ENST00000465768 REM2Q8IYK8 340 aaPredicted RBP11.88□□□□□ -0.51
SAMM50-202ENST00000465768 FBLN2P98095 1184 aa11.85□□□□□ -0.51
SAMM50-202ENST00000465768 SPDYE2BA6NHP3 402 aa11.79□□□□□ -0.52
SAMM50-202ENST00000465768 SPDYE6P0CI01 402 aa11.79□□□□□ -0.52
SAMM50-202ENST00000465768 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
SAMM50-202ENST00000465768 PITPNM1O00562 1244 aa11.76□□□□□ -0.53
SAMM50-202ENST00000465768 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
SAMM50-202ENST00000465768 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
SAMM50-202ENST00000465768 MKRN4PQ13434 485 aaPredicted RBP11.66□□□□□ -0.54
SAMM50-202ENST00000465768 SP7Q8TDD2 431 aaPredicted RBP11.64□□□□□ -0.55
SAMM50-202ENST00000465768 SSUH2Q9Y2M2 353 aa11.61□□□□□ -0.55
SAMM50-202ENST00000465768 SPDYE1Q8NFV5 336 aaPredicted RBP11.59□□□□□ -0.55
SAMM50-202ENST00000465768 ZNF692Q9BU19 519 aaPredicted RBP11.58□□□□□ -0.56
SAMM50-202ENST00000465768 HAX1O00165 279 aa11.53□□□□□ -0.56
SAMM50-202ENST00000465768 CLEC11AQ9Y240 323 aa11.51□□□□□ -0.57
SAMM50-202ENST00000465768 PRKAR2AP13861 404 aaKnown RBP11.46□□□□□ -0.57
SAMM50-202ENST00000465768 PABPN1Q86U42 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
SAMM50-202ENST00000465768 PRR29P0C7W0 189 aa11.33□□□□□ -0.6
SAMM50-202ENST00000465768 C19orf67A6NJJ6 358 aa11.31□□□□□ -0.6
SAMM50-202ENST00000465768 EVX2Q03828 476 aa11.31□□□□□ -0.6
SAMM50-202ENST00000465768 CHADLQ6NUI6 762 aa11.26□□□□□ -0.61
SAMM50-202ENST00000465768 STAG3Q9UJ98 1225 aa11.15□□□□□ -0.62
SAMM50-202ENST00000465768 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
SAMM50-202ENST00000465768 SPDYE4A6NLX3 237 aa11.12□□□□□ -0.63
SAMM50-202ENST00000465768 GABBR2O75899 941 aa11.12□□□□□ -0.63
SAMM50-202ENST00000465768 CD44P16070 742 aaKnown RBP11.11□□□□□ -0.63
SAMM50-202ENST00000465768 CLCN6P51797 869 aa11.06□□□□□ -0.64
SAMM50-202ENST00000465768 CREBZFQ9NS37 354 aa11.02□□□□□ -0.65
SAMM50-202ENST00000465768 ZNF579Q8NAF0 562 aaKnown RBP10.96□□□□□ -0.65
SAMM50-202ENST00000465768 ZRANB1Q9UGI0 708 aa10.92□□□□□ -0.66
SAMM50-202ENST00000465768 PAK3O75914 559 aaPredicted RBP10.9□□□□□ -0.66
SAMM50-202ENST00000465768 NPM1P06748 294 aaKnown RBP eCLIP10.89□□□□□ -0.67
SAMM50-202ENST00000465768 LHX8Q68G74 356 aa10.88□□□□□ -0.67
SAMM50-202ENST00000465768 PROM2Q8N271 834 aa10.87□□□□□ -0.67
SAMM50-202ENST00000465768 POTEIP0CG38 1075 aa10.85□□□□□ -0.67
SAMM50-202ENST00000465768 DCBLD2Q96PD2 775 aa10.85□□□□□ -0.67
SAMM50-202ENST00000465768 MNX1P50219 401 aaPredicted RBP10.82□□□□□ -0.68
SAMM50-202ENST00000465768 GALR2O43603 387 aaPredicted RBP10.76□□□□□ -0.69
SAMM50-202ENST00000465768 FKBP8Q14318 412 aa10.76□□□□□ -0.69
SAMM50-202ENST00000465768 PHF12Q96QT6 1004 aa10.75□□□□□ -0.69
SAMM50-202ENST00000465768 PLEKHG5O94827 1062 aa10.7□□□□□ -0.7
SAMM50-202ENST00000465768 MS4A3Q96HJ5 214 aa10.62□□□□□ -0.71
SAMM50-202ENST00000465768 TSPYL2Q9H2G4 693 aaPredicted RBP10.6□□□□□ -0.71
SAMM50-202ENST00000465768 CCDC61Q9Y6R9 512 aa10.6□□□□□ -0.71
SAMM50-202ENST00000465768 MIER1Q8N108 512 aa10.59□□□□□ -0.71
SAMM50-202ENST00000465768 ASTLQ6HA08 431 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms