RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.13■■□□□ 1.45
COL2A1-203ENST00000465743 TANGO6Q9C0B7 1094 aa24.13■■□□□ 1.45
COL2A1-203ENST00000465743 MYH4Q9Y623 1939 aa24.13■■□□□ 1.45
COL2A1-203ENST00000465743 CYP2B6P20813 491 aa24.12■■□□□ 1.45
COL2A1-203ENST00000465743 PDE1AP54750 535 aa24.12■■□□□ 1.45
COL2A1-203ENST00000465743 SBK1Q52WX2 424 aa24.12■■□□□ 1.45
COL2A1-203ENST00000465743 PRPF38BQ5VTL8 546 aaKnown RBP24.12■■□□□ 1.45
COL2A1-203ENST00000465743 GPR142Q7Z601 462 aa24.12■■□□□ 1.45
COL2A1-203ENST00000465743 GTF3C2Q8WUA4 911 aaPredicted RBP24.12■■□□□ 1.45
COL2A1-203ENST00000465743 CCDC17Q96LX7 622 aa24.12■■□□□ 1.45
COL2A1-203ENST00000465743 ARHGEF10LQ9HCE6 1279 aa24.12■■□□□ 1.45
COL2A1-203ENST00000465743 STAP2Q9UGK3 403 aa24.12■■□□□ 1.45
COL2A1-203ENST00000465743 APPP05067 770 aa24.11■■□□□ 1.45
COL2A1-203ENST00000465743 GJB1P08034 283 aa24.11■■□□□ 1.45
COL2A1-203ENST00000465743 EEF2P13639 858 aaKnown RBP24.11■■□□□ 1.45
COL2A1-203ENST00000465743 RASA1P20936 1047 aa24.11■■□□□ 1.45
COL2A1-203ENST00000465743 GIMAP6Q6P9H5 292 aa24.11■■□□□ 1.45
COL2A1-203ENST00000465743 TRIB2Q92519 343 aa24.11■■□□□ 1.45
COL2A1-203ENST00000465743 RABGAP1Q9Y3P9 1069 aa24.11■■□□□ 1.45
COL2A1-203ENST00000465743 FOXP2O15409 715 aa24.1■■□□□ 1.45
COL2A1-203ENST00000465743 PRDM1O75626 825 aa24.1■■□□□ 1.45
COL2A1-203ENST00000465743 MAPK4P31152 587 aa24.1■■□□□ 1.45
COL2A1-203ENST00000465743 SAMD1Q6SPF0 538 aaPredicted RBP24.1■■□□□ 1.45
COL2A1-203ENST00000465743 U2AF1L4Q8WU68 220 aaKnown RBP24.1■■□□□ 1.45
COL2A1-203ENST00000465743 VCPKMTQ9H867 229 aa24.1■■□□□ 1.45
COL2A1-203ENST00000465743 TMX2Q9Y320 296 aa24.1■■□□□ 1.45
COL2A1-203ENST00000465743 HMGCRP04035 888 aa24.09■■□□□ 1.45
COL2A1-203ENST00000465743 GNAT2P19087 354 aa24.09■■□□□ 1.45
COL2A1-203ENST00000465743 GJA8P48165 433 aa24.09■■□□□ 1.45
COL2A1-203ENST00000465743 LRRFIP1Q32MZ4 808 aaKnown RBP24.09■■□□□ 1.45
COL2A1-203ENST00000465743 WDR78Q5VTH9 848 aa24.09■■□□□ 1.45
COL2A1-203ENST00000465743 LBX2Q6XYB7 198 aa24.09■■□□□ 1.45
COL2A1-203ENST00000465743 CCAR1Q8IX12 1150 aaKnown RBP24.09■■□□□ 1.45
COL2A1-203ENST00000465743 IFNL3Q8IZI9 196 aa24.09■■□□□ 1.45
COL2A1-203ENST00000465743 CCL14Q16627 93 aa24.08■■□□□ 1.45
COL2A1-203ENST00000465743 PLEKHH3Q7Z736 793 aa24.08■■□□□ 1.45
COL2A1-203ENST00000465743 SOCS4Q8WXH5 440 aa24.08■■□□□ 1.45
COL2A1-203ENST00000465743 DEFB118Q96PH6 123 aa24.08■■□□□ 1.45
COL2A1-203ENST00000465743 NUDT12Q9BQG2 462 aa24.08■■□□□ 1.45
COL2A1-203ENST00000465743 PATL2C9JE40 543 aaKnown RBP24.07■■□□□ 1.44
COL2A1-203ENST00000465743 MORN1Q5T089 497 aa24.07■■□□□ 1.44
COL2A1-203ENST00000465743 VPS53Q5VIR6 699 aa24.07■■□□□ 1.44
COL2A1-203ENST00000465743 USP6NLQ92738 828 aa24.07■■□□□ 1.44
COL2A1-203ENST00000465743 SH2D4AQ9H788 454 aa24.07■■□□□ 1.44
COL2A1-203ENST00000465743 MKNK2Q9HBH9 465 aa24.07■■□□□ 1.44
COL2A1-203ENST00000465743 CWC22Q9HCG8 908 aaKnown RBP24.07■■□□□ 1.44
COL2A1-203ENST00000465743 PAK6Q9NQU5 681 aaPredicted RBP24.07■■□□□ 1.44
COL2A1-203ENST00000465743 RAD21O60216 631 aa24.06■■□□□ 1.44
COL2A1-203ENST00000465743 FLOT1O75955 427 aa24.06■■□□□ 1.44
COL2A1-203ENST00000465743 NUCB1Q02818 461 aa24.06■■□□□ 1.44
COL2A1-203ENST00000465743 CHD1LQ86WJ1 897 aa24.06■■□□□ 1.44
COL2A1-203ENST00000465743 LPAR1Q92633 364 aa24.06■■□□□ 1.44
COL2A1-203ENST00000465743 EVI5LQ96CN4 794 aa24.06■■□□□ 1.44
COL2A1-203ENST00000465743 ATG4CQ96DT6 458 aa24.06■■□□□ 1.44
COL2A1-203ENST00000465743 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.06■■□□□ 1.44
COL2A1-203ENST00000465743 KANSL2Q9H9L4 492 aa24.06■■□□□ 1.44
COL2A1-203ENST00000465743 FBXO28Q9NVF7 368 aa24.06■■□□□ 1.44
COL2A1-203ENST00000465743 CEP290O15078 2479 aa24.06■■□□□ 1.44
COL2A1-203ENST00000465743 A0A0D9SFI3 127 aa24.05■■□□□ 1.44
COL2A1-203ENST00000465743 COG2Q14746 738 aa24.05■■□□□ 1.44
COL2A1-203ENST00000465743 FAM227BQ96M60 508 aa24.05■■□□□ 1.44
COL2A1-203ENST00000465743 NAPBQ9H115 298 aa24.05■■□□□ 1.44
COL2A1-203ENST00000465743 FRMPD3Q5JV73 1810 aa24.05■■□□□ 1.44
COL2A1-203ENST00000465743 ZNF236Q9UL36 1845 aa24.05■■□□□ 1.44
COL2A1-203ENST00000465743 ALPK3Q96L96 1907 aa24.04■■□□□ 1.44
COL2A1-203ENST00000465743 WDR46O15213 610 aaKnown RBP24.04■■□□□ 1.44
COL2A1-203ENST00000465743 SGPL1O95470 568 aa24.04■■□□□ 1.44
COL2A1-203ENST00000465743 RGS2P41220 211 aa24.04■■□□□ 1.44
COL2A1-203ENST00000465743 CCNA1P78396 465 aa24.04■■□□□ 1.44
COL2A1-203ENST00000465743 UBE2Q1Q7Z7E8 422 aa24.04■■□□□ 1.44
COL2A1-203ENST00000465743 NKX2-3Q8TAU0 364 aa24.04■■□□□ 1.44
COL2A1-203ENST00000465743 NUP88Q99567 741 aaPredicted RBP24.04■■□□□ 1.44
COL2A1-203ENST00000465743 APBA2Q99767 749 aa24.04■■□□□ 1.44
COL2A1-203ENST00000465743 MOV10L1Q9BXT6 1211 aaKnown RBP24.04■■□□□ 1.44
COL2A1-203ENST00000465743 FARP2O94887 1054 aaPredicted RBP24.03■■□□□ 1.44
COL2A1-203ENST00000465743 PRKAR2AP13861 404 aaKnown RBP24.03■■□□□ 1.44
COL2A1-203ENST00000465743 ZKSCAN1P17029 563 aaPredicted RBP24.03■■□□□ 1.44
COL2A1-203ENST00000465743 DSG3P32926 999 aa24.03■■□□□ 1.44
COL2A1-203ENST00000465743 PPARAQ07869 468 aa24.03■■□□□ 1.44
COL2A1-203ENST00000465743 FAM83BQ5T0W9 1011 aa24.03■■□□□ 1.44
COL2A1-203ENST00000465743 NACAP1Q9BZK3 213 aa24.03■■□□□ 1.44
COL2A1-203ENST00000465743 IGKV6D-41A0A0C4DH26 115 aa24.02■■□□□ 1.44
COL2A1-203ENST00000465743 MAP2K5Q13163 448 aa24.02■■□□□ 1.44
COL2A1-203ENST00000465743 FAM47AQ5JRC9 791 aa24.02■■□□□ 1.44
COL2A1-203ENST00000465743 SPATC1LQ9H0A9 340 aa24.02■■□□□ 1.44
COL2A1-203ENST00000465743 GOPCQ9HD26 462 aa24.02■■□□□ 1.44
COL2A1-203ENST00000465743 FLRT1Q9NZU1 646 aa24.02■■□□□ 1.44
COL2A1-203ENST00000465743 TACC3Q9Y6A5 838 aa24.02■■□□□ 1.44
COL2A1-203ENST00000465743 TRIM6-TRIM34B2RNG4 842 aa24.01■■□□□ 1.43
COL2A1-203ENST00000465743 XRCC5P13010 732 aaKnown RBP24.01■■□□□ 1.43
COL2A1-203ENST00000465743 PTPREP23469 700 aa24.01■■□□□ 1.43
COL2A1-203ENST00000465743 CTDSPL2Q05D32 466 aa24.01■■□□□ 1.43
COL2A1-203ENST00000465743 NMIQ13287 307 aaPredicted RBP24.01■■□□□ 1.43
COL2A1-203ENST00000465743 PLS1Q14651 629 aa24.01■■□□□ 1.43
COL2A1-203ENST00000465743 MAP3K21Q5TCX8 1036 aa24.01■■□□□ 1.43
COL2A1-203ENST00000465743 PLEKHM2Q8IWE5 1019 aa24.01■■□□□ 1.43
COL2A1-203ENST00000465743 DIS3LQ8TF46 1054 aaKnown RBP24.01■■□□□ 1.43
COL2A1-203ENST00000465743 CEP95Q96GE4 821 aa24.01■■□□□ 1.43
COL2A1-203ENST00000465743 INCENPQ9NQS7 918 aa24.01■■□□□ 1.43
COL2A1-203ENST00000465743 HOXC10Q9NYD6 342 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms