RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 S1PR4O95977 384 aa11.8□□□□□ -0.52
APP-213ENST00000464867 FKBP5Q13451 457 aaPredicted RBP11.8□□□□□ -0.52
APP-213ENST00000464867 TRIM60Q495X7 471 aa11.8□□□□□ -0.52
APP-213ENST00000464867 PLEKHH3Q7Z736 793 aa11.8□□□□□ -0.52
APP-213ENST00000464867 ZFPM1Q8IX07 1006 aa11.8□□□□□ -0.52
APP-213ENST00000464867 SCUBE3Q8IX30 993 aa11.8□□□□□ -0.52
APP-213ENST00000464867 EPHX3Q9H6B9 360 aa11.8□□□□□ -0.52
APP-213ENST00000464867 PDLIM7Q9NR12 457 aa11.8□□□□□ -0.52
APP-213ENST00000464867 CXXC1Q9P0U4 656 aaPredicted RBP11.8□□□□□ -0.52
APP-213ENST00000464867 MYH13Q9UKX3 1938 aa11.8□□□□□ -0.52
APP-213ENST00000464867 CACNA1AO00555 2505 aa11.8□□□□□ -0.52
APP-213ENST00000464867 LOC285556D6RIA3 1793 aa11.79□□□□□ -0.52
APP-213ENST00000464867 NR1I2O75469 434 aa11.79□□□□□ -0.52
APP-213ENST00000464867 BMP1P13497 986 aa11.79□□□□□ -0.52
APP-213ENST00000464867 RAG1P15918 1043 aa11.79□□□□□ -0.52
APP-213ENST00000464867 RGS3P49796 1198 aa11.79□□□□□ -0.52
APP-213ENST00000464867 ATP2B2Q01814 1243 aa11.79□□□□□ -0.52
APP-213ENST00000464867 MAP3K10Q02779 954 aa11.79□□□□□ -0.52
APP-213ENST00000464867 FPGSQ05932 587 aa11.79□□□□□ -0.52
APP-213ENST00000464867 WDR43Q15061 677 aaKnown RBP eCLIP11.79□□□□□ -0.52
APP-213ENST00000464867 GJC2Q5T442 439 aaPredicted RBP11.79□□□□□ -0.52
APP-213ENST00000464867 Q6ZNB5 142 aa11.79□□□□□ -0.52
APP-213ENST00000464867 GPR142Q7Z601 462 aa11.79□□□□□ -0.52
APP-213ENST00000464867 CCDC84Q86UT8 332 aaPredicted RBP11.79□□□□□ -0.52
APP-213ENST00000464867 EDC3Q96F86 508 aaKnown RBP11.79□□□□□ -0.52
APP-213ENST00000464867 AS3MTQ9HBK9 375 aa11.79□□□□□ -0.52
APP-213ENST00000464867 TMOD4Q9NZQ9 345 aa11.79□□□□□ -0.52
APP-213ENST00000464867 UTYO14607 1347 aa11.79□□□□□ -0.52
APP-213ENST00000464867 ATRNL1Q5VV63 1379 aa11.79□□□□□ -0.52
APP-213ENST00000464867 TRIM43BA6NCK2 446 aa11.78□□□□□ -0.52
APP-213ENST00000464867 GFRA3O60609 400 aa11.78□□□□□ -0.52
APP-213ENST00000464867 GPR37L1O60883 481 aa11.78□□□□□ -0.52
APP-213ENST00000464867 MRE11P49959 708 aa11.78□□□□□ -0.52
APP-213ENST00000464867 MAP2K5Q13163 448 aa11.78□□□□□ -0.52
APP-213ENST00000464867 DIXDC1Q155Q3 683 aa11.78□□□□□ -0.52
APP-213ENST00000464867 METTL24Q5JXM2 366 aa11.78□□□□□ -0.52
APP-213ENST00000464867 MORN1Q5T089 497 aa11.78□□□□□ -0.52
APP-213ENST00000464867 CCDC174Q6PII3 467 aa11.78□□□□□ -0.52
APP-213ENST00000464867 G2E3Q7L622 706 aa11.78□□□□□ -0.52
APP-213ENST00000464867 SH3RF1Q7Z6J0 888 aa11.78□□□□□ -0.52
APP-213ENST00000464867 CCER1Q8TC90 406 aaPredicted RBP11.78□□□□□ -0.52
APP-213ENST00000464867 USP6NLQ92738 828 aa11.78□□□□□ -0.52
APP-213ENST00000464867 TRIM43Q96BQ3 446 aaPredicted RBP11.78□□□□□ -0.52
APP-213ENST00000464867 IDI2Q9BXS1 227 aa11.78□□□□□ -0.52
APP-213ENST00000464867 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.78□□□□□ -0.52
APP-213ENST00000464867 PLXNA1Q9UIW2 1896 aa11.77□□□□□ -0.53
APP-213ENST00000464867 ADH1BP00325 375 aa11.77□□□□□ -0.53
APP-213ENST00000464867 LDHBP07195 334 aaKnown RBP11.77□□□□□ -0.53
APP-213ENST00000464867 IFIT1P09914 478 aaKnown RBP11.77□□□□□ -0.53
APP-213ENST00000464867 HERVK_113P62684 666 aa11.77□□□□□ -0.53
APP-213ENST00000464867 FUT2Q10981 343 aa11.77□□□□□ -0.53
APP-213ENST00000464867 FLIIQ13045 1269 aa11.77□□□□□ -0.53
APP-213ENST00000464867 GTF3C2Q8WUA4 911 aaPredicted RBP11.77□□□□□ -0.53
APP-213ENST00000464867 PUS3Q9BZE2 481 aaKnown RBP11.77□□□□□ -0.53
APP-213ENST00000464867 OSBPL5Q9H0X9 879 aaPredicted RBP11.77□□□□□ -0.53
APP-213ENST00000464867 USP17L5A8MUK1 530 aa11.76□□□□□ -0.53
APP-213ENST00000464867 LCE2BO14633 110 aa11.76□□□□□ -0.53
APP-213ENST00000464867 PDE8BO95263 885 aa11.76□□□□□ -0.53
APP-213ENST00000464867 CLTBP09497 229 aa11.76□□□□□ -0.53
APP-213ENST00000464867 HOXA7P31268 230 aaPredicted RBP11.76□□□□□ -0.53
APP-213ENST00000464867 ERVK-9P63128 1117 aa11.76□□□□□ -0.53
APP-213ENST00000464867 ERVK-24P63145 666 aa11.76□□□□□ -0.53
APP-213ENST00000464867 CCNA1P78396 465 aa11.76□□□□□ -0.53
APP-213ENST00000464867 TLE2Q04725 743 aa11.76□□□□□ -0.53
APP-213ENST00000464867 SNX17Q15036 470 aa11.76□□□□□ -0.53
APP-213ENST00000464867 SKIV2LQ15477 1246 aaKnown RBP11.76□□□□□ -0.53
APP-213ENST00000464867 SH3D19Q5HYK7 790 aa11.76□□□□□ -0.53
APP-213ENST00000464867 WDR78Q5VTH9 848 aa11.76□□□□□ -0.53
APP-213ENST00000464867 C1orf53Q5VUE5 145 aa11.76□□□□□ -0.53
APP-213ENST00000464867 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.76□□□□□ -0.53
APP-213ENST00000464867 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
APP-213ENST00000464867 MSRAQ9UJ68 235 aa11.76□□□□□ -0.53
APP-213ENST00000464867 DDTLA6NHG4 134 aaPredicted RBP11.75□□□□□ -0.53
APP-213ENST00000464867 SMIM22K7EJ46 135 aa11.75□□□□□ -0.53
APP-213ENST00000464867 TULP1O00294 542 aaPredicted RBP11.75□□□□□ -0.53
APP-213ENST00000464867 ADCYAP1R1P41586 468 aa11.75□□□□□ -0.53
APP-213ENST00000464867 GCGRP47871 477 aa11.75□□□□□ -0.53
APP-213ENST00000464867 EPHB4P54760 987 aa11.75□□□□□ -0.53
APP-213ENST00000464867 EPHA10Q5JZY3 1008 aa11.75□□□□□ -0.53
APP-213ENST00000464867 TSPYL6Q8N831 410 aa11.75□□□□□ -0.53
APP-213ENST00000464867 FERMT2Q96AC1 680 aa11.75□□□□□ -0.53
APP-213ENST00000464867 PAGR1Q9BTK6 254 aa11.75□□□□□ -0.53
APP-213ENST00000464867 TXNRD2Q9NNW7 524 aa11.75□□□□□ -0.53
APP-213ENST00000464867 IVNS1ABPQ9Y6Y0 642 aa11.75□□□□□ -0.53
APP-213ENST00000464867 CACNA1FO60840 1977 aa11.75□□□□□ -0.53
APP-213ENST00000464867 ATAD5Q96QE3 1844 aa11.74□□□□□ -0.53
APP-213ENST00000464867 GRM8O00222 908 aa11.74□□□□□ -0.53
APP-213ENST00000464867 KIAA0355O15063 1070 aa11.74□□□□□ -0.53
APP-213ENST00000464867 PICALMQ13492 652 aa11.74□□□□□ -0.53
APP-213ENST00000464867 ADGRE1Q14246 886 aa11.74□□□□□ -0.53
APP-213ENST00000464867 LAPTM4AQ15012 233 aa11.74□□□□□ -0.53
APP-213ENST00000464867 RAB30Q15771 203 aa11.74□□□□□ -0.53
APP-213ENST00000464867 Q3C1V9 767 aa11.74□□□□□ -0.53
APP-213ENST00000464867 SH3BP5LQ7L8J4 393 aa11.74□□□□□ -0.53
APP-213ENST00000464867 MICALL1Q8N3F8 863 aa11.74□□□□□ -0.53
APP-213ENST00000464867 PBX4Q9BYU1 374 aa11.74□□□□□ -0.53
APP-213ENST00000464867 PORCNQ9H237 461 aa11.74□□□□□ -0.53
APP-213ENST00000464867 SLC28A3Q9HAS3 691 aa11.74□□□□□ -0.53
APP-213ENST00000464867 TMEM39AQ9NV64 488 aa11.74□□□□□ -0.53
APP-213ENST00000464867 RBPJLQ9UBG7 517 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms