RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 RNF208Q9H0X6 261 aa15.62■□□□□ 0.09
HDAC1-203ENST00000463172 HELLSQ9NRZ9 838 aa15.62■□□□□ 0.09
HDAC1-203ENST00000463172 RBPJLQ9UBG7 517 aa15.62■□□□□ 0.09
HDAC1-203ENST00000463172 TNRC18O15417 2968 aaPredicted RBP15.62■□□□□ 0.09
HDAC1-203ENST00000463172 WDR46O15213 610 aaKnown RBP15.61■□□□□ 0.09
HDAC1-203ENST00000463172 MFAP1P55081 439 aaKnown RBP15.61■□□□□ 0.09
HDAC1-203ENST00000463172 NUCB1Q02818 461 aa15.61■□□□□ 0.09
HDAC1-203ENST00000463172 PPP4R3BQ5MIZ7 849 aa15.61■□□□□ 0.09
HDAC1-203ENST00000463172 MB21D1Q8N884 522 aa15.61■□□□□ 0.09
HDAC1-203ENST00000463172 VCPKMTQ9H867 229 aa15.61■□□□□ 0.09
HDAC1-203ENST00000463172 IVNS1ABPQ9Y6Y0 642 aa15.61■□□□□ 0.09
HDAC1-203ENST00000463172 A0A1W2PRG0 241 aa15.6■□□□□ 0.09
HDAC1-203ENST00000463172 RAD21O60216 631 aa15.6■□□□□ 0.09
HDAC1-203ENST00000463172 GJB1P08034 283 aa15.6■□□□□ 0.09
HDAC1-203ENST00000463172 CCL5P13501 91 aa15.6■□□□□ 0.09
HDAC1-203ENST00000463172 EN2P19622 333 aaPredicted RBP15.6■□□□□ 0.09
HDAC1-203ENST00000463172 PLEKHH3Q7Z736 793 aa15.6■□□□□ 0.09
HDAC1-203ENST00000463172 RILPL2Q969X0 211 aa15.6■□□□□ 0.09
HDAC1-203ENST00000463172 TXNRD2Q9NNW7 524 aa15.6■□□□□ 0.09
HDAC1-203ENST00000463172 FLOT1O75955 427 aa15.59■□□□□ 0.09
HDAC1-203ENST00000463172 HMGCRP04035 888 aa15.59■□□□□ 0.09
HDAC1-203ENST00000463172 INHAP05111 366 aa15.59■□□□□ 0.09
HDAC1-203ENST00000463172 EEF2P13639 858 aaKnown RBP15.59■□□□□ 0.09
HDAC1-203ENST00000463172 ELNP15502 786 aa15.59■□□□□ 0.09
HDAC1-203ENST00000463172 RASA1P20936 1047 aa15.59■□□□□ 0.09
HDAC1-203ENST00000463172 RGS2P41220 211 aa15.59■□□□□ 0.09
HDAC1-203ENST00000463172 MCMDC2Q4G0Z9 681 aa15.59■□□□□ 0.09
HDAC1-203ENST00000463172 WDR78Q5VTH9 848 aa15.59■□□□□ 0.09
HDAC1-203ENST00000463172 GPR142Q7Z601 462 aa15.59■□□□□ 0.09
HDAC1-203ENST00000463172 STK11IPQ8N1F8 1099 aa15.59■□□□□ 0.09
HDAC1-203ENST00000463172 SEC62Q99442 399 aaKnown RBP15.59■□□□□ 0.09
HDAC1-203ENST00000463172 EPB41L4AQ9HCS5 686 aaPredicted RBP15.59■□□□□ 0.09
HDAC1-203ENST00000463172 SPDYE16A6NNV3 312 aaPredicted RBP15.58■□□□□ 0.08
HDAC1-203ENST00000463172 HIP1O00291 1037 aa15.58■□□□□ 0.08
HDAC1-203ENST00000463172 IGHDP01880 384 aa15.58■□□□□ 0.08
HDAC1-203ENST00000463172 TSPY3P0CV98 308 aa15.58■□□□□ 0.08
HDAC1-203ENST00000463172 TSPY8P0CW00 308 aa15.58■□□□□ 0.08
HDAC1-203ENST00000463172 XRCC5P13010 732 aaKnown RBP15.58■□□□□ 0.08
HDAC1-203ENST00000463172 PPARAQ07869 468 aa15.58■□□□□ 0.08
HDAC1-203ENST00000463172 MTFR1Q15390 333 aa15.58■□□□□ 0.08
HDAC1-203ENST00000463172 OSBPL3Q9H4L5 887 aa15.58■□□□□ 0.08
HDAC1-203ENST00000463172 NYAP2Q9P242 653 aa15.58■□□□□ 0.08
HDAC1-203ENST00000463172 SYNPO2Q9UMS6 1093 aa15.58■□□□□ 0.08
HDAC1-203ENST00000463172 MYH4Q9Y623 1939 aa15.58■□□□□ 0.08
HDAC1-203ENST00000463172 GREB1LQ9C091 1923 aaPredicted RBP15.57■□□□□ 0.08
HDAC1-203ENST00000463172 ZKSCAN1P17029 563 aaPredicted RBP15.57■□□□□ 0.08
HDAC1-203ENST00000463172 CYP2B6P20813 491 aa15.57■□□□□ 0.08
HDAC1-203ENST00000463172 DSG3P32926 999 aa15.57■□□□□ 0.08
HDAC1-203ENST00000463172 GJA8P48165 433 aa15.57■□□□□ 0.08
HDAC1-203ENST00000463172 Q3C1V9 767 aa15.57■□□□□ 0.08
HDAC1-203ENST00000463172 SPICE1Q8N0Z3 855 aa15.57■□□□□ 0.08
HDAC1-203ENST00000463172 GJD2Q9UKL4 321 aa15.57■□□□□ 0.08
HDAC1-203ENST00000463172 SLC15A5A6NIM6 579 aa15.56■□□□□ 0.08
HDAC1-203ENST00000463172 PRPF38BQ5VTL8 546 aaKnown RBP15.56■□□□□ 0.08
HDAC1-203ENST00000463172 CLEC10AQ8IUN9 316 aa15.56■□□□□ 0.08
HDAC1-203ENST00000463172 SIAH1Q8IUQ4 282 aa15.56■□□□□ 0.08
HDAC1-203ENST00000463172 PLEKHM2Q8IWE5 1019 aa15.56■□□□□ 0.08
HDAC1-203ENST00000463172 SHCBP1Q8NEM2 672 aa15.56■□□□□ 0.08
HDAC1-203ENST00000463172 APBA2Q99767 749 aa15.56■□□□□ 0.08
HDAC1-203ENST00000463172 UNC93B1Q9H1C4 597 aa15.56■□□□□ 0.08
HDAC1-203ENST00000463172 PORCNQ9H237 461 aa15.56■□□□□ 0.08
HDAC1-203ENST00000463172 DIAPH3Q9NSV4 1193 aa15.56■□□□□ 0.08
HDAC1-203ENST00000463172 SLC5A4Q9NY91 659 aa15.56■□□□□ 0.08
HDAC1-203ENST00000463172 PLXNB2O15031 1838 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 SMIM22K7EJ46 135 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 STRNO43815 780 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 PRDM1O75626 825 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 CNMDO75829 334 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 SGPL1O95470 568 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 TTLL1O95922 423 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 COPB2P35606 906 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 MAP2K5Q13163 448 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 PLS1Q14651 629 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 ALX1Q15699 326 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 SAMD1Q6SPF0 538 aaPredicted RBP15.55■□□□□ 0.08
HDAC1-203ENST00000463172 CCDC129Q6ZRS4 1044 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 NEDD1Q8NHV4 660 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 U2AF1L4Q8WU68 220 aaKnown RBP15.55■□□□□ 0.08
HDAC1-203ENST00000463172 MROH8Q9H579 483 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 HMX1Q9NP08 348 aaPredicted RBP15.55■□□□□ 0.08
HDAC1-203ENST00000463172 BTBD7Q9P203 1132 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 CLIP2Q9UDT6 1046 aa15.55■□□□□ 0.08
HDAC1-203ENST00000463172 CTDP1Q9Y5B0 961 aaPredicted RBP15.55■□□□□ 0.08
HDAC1-203ENST00000463172 PLIN4Q96Q06 1357 aa15.54■□□□□ 0.08
HDAC1-203ENST00000463172 CCDC171Q6TFL3 1326 aa15.54■□□□□ 0.08
HDAC1-203ENST00000463172 RPTORQ8N122 1335 aa15.54■□□□□ 0.08
HDAC1-203ENST00000463172 TSPY2A6NKD2 308 aa15.54■□□□□ 0.08
HDAC1-203ENST00000463172 SLC25A27O95847 323 aa15.54■□□□□ 0.08
HDAC1-203ENST00000463172 TFRCP02786 760 aaKnown RBP15.54■□□□□ 0.08
HDAC1-203ENST00000463172 PTPREP23469 700 aa15.54■□□□□ 0.08
HDAC1-203ENST00000463172 TFAP4Q01664 338 aa15.54■□□□□ 0.08
HDAC1-203ENST00000463172 MORN1Q5T089 497 aa15.54■□□□□ 0.08
HDAC1-203ENST00000463172 HTATIP2Q9BUP3 242 aa15.54■□□□□ 0.08
HDAC1-203ENST00000463172 SPATC1LQ9H0A9 340 aa15.54■□□□□ 0.08
HDAC1-203ENST00000463172 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.54■□□□□ 0.08
HDAC1-203ENST00000463172 RLFQ13129 1914 aa15.54■□□□□ 0.08
HDAC1-203ENST00000463172 PARP14Q460N5 1801 aa15.54■□□□□ 0.08
HDAC1-203ENST00000463172 A0A0G2JMZ2 1700 aa15.54■□□□□ 0.08
HDAC1-203ENST00000463172 ZMYM6O95789 1325 aa15.53■□□□□ 0.08
HDAC1-203ENST00000463172 F5H6K3 240 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms