RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 CDC27P30260 824 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 SHMT1P34896 483 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 KRT2P35908 639 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 GMPSP49915 693 aaPredicted RBP8.6□□□□□ -1.03
LSG1-205ENST00000461343 ICA1Q05084 483 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 TCP10Q12799 353 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 NFIAQ12857 509 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 RESTQ13127 1097 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 ORC2Q13416 577 aaPredicted RBP8.6□□□□□ -1.03
LSG1-205ENST00000461343 PKP1Q13835 747 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 SF3A1Q15459 793 aaKnown RBP8.6□□□□□ -1.03
LSG1-205ENST00000461343 PFKFB3Q16875 520 aaPredicted RBP8.6□□□□□ -1.03
LSG1-205ENST00000461343 KIF4BQ2VIQ3 1234 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 KRT40Q6A162 431 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 SLC51AQ86UW1 340 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 MICALL2Q8IY33 904 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 GMCL1Q96IK5 515 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 NAP1L4Q99733 375 aaKnown RBP8.6□□□□□ -1.03
LSG1-205ENST00000461343 PYM1Q9BRP8 204 aaKnown RBP8.6□□□□□ -1.03
LSG1-205ENST00000461343 SYT17Q9BSW7 474 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 GPHNQ9NQX3 736 aaPredicted RBP8.6□□□□□ -1.03
LSG1-205ENST00000461343 KCNQ5Q9NR82 932 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 IL17RBQ9NRM6 502 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 POLR3EQ9NVU0 708 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 CNOT7Q9UIV1 285 aaKnown RBP8.6□□□□□ -1.03
LSG1-205ENST00000461343 GJA3Q9Y6H8 435 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 MORC2Q9Y6X9 1032 aaPredicted RBP8.6□□□□□ -1.03
LSG1-205ENST00000461343 DICER1Q9UPY3 1922 aaKnown RBP8.6□□□□□ -1.03
LSG1-205ENST00000461343 IQCA1LA6NCM1 817 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 PALM3A6NDB9 673 aaPredicted RBP8.59□□□□□ -1.03
LSG1-205ENST00000461343 TCP10L2B9ZVM9 353 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 WNT10BO00744 389 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 FDPSP14324 419 aaKnown RBP8.59□□□□□ -1.03
LSG1-205ENST00000461343 SLC1A4P43007 532 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 KIF23Q02241 960 aaPredicted RBP8.59□□□□□ -1.03
LSG1-205ENST00000461343 MAP3K10Q02779 954 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 L1TD1Q5T7N2 865 aaKnown RBP8.59□□□□□ -1.03
LSG1-205ENST00000461343 NBPF11Q86T75 865 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 NOSTRINQ8IVI9 506 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 CCDC144CPQ8IYA2 1237 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 PHKBQ93100 1093 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 AS3MTQ9HBK9 375 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 C6orf50Q9HD87 102 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 INCENPQ9NQS7 918 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 FAM217BQ9NTX9 383 aaPredicted RBP8.59□□□□□ -1.03
LSG1-205ENST00000461343 RTEL1Q9NZ71 1219 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 GPRC5DQ9NZD1 345 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 CLIP2Q9UDT6 1046 aa8.59□□□□□ -1.03
LSG1-205ENST00000461343 HOOK1Q9UJC3 728 aaKnown RBP8.59□□□□□ -1.03
LSG1-205ENST00000461343 V9GY48 417 aaPredicted RBP8.59□□□□□ -1.03
LSG1-205ENST00000461343 CNTNAP5Q8WYK1 1306 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 ESYT2A0FGR8 921 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 CTAGE5O15320 804 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 FIBPO43427 364 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 CTNND1O60716 968 aaKnown RBP8.58□□□□□ -1.04
LSG1-205ENST00000461343 SNHG28P0DPA3 235 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 FDX1P10109 184 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 PDHBP11177 359 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 AKR1B1P15121 316 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 RXRAP19793 462 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 DSG3P32926 999 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 NF2P35240 595 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 USP14P54578 494 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 NLRP5P59047 1200 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 DNM1Q05193 864 aaKnown RBP8.58□□□□□ -1.04
LSG1-205ENST00000461343 STK38Q15208 465 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 FOXD4L5Q5VV16 416 aaPredicted RBP8.58□□□□□ -1.04
LSG1-205ENST00000461343 MYSM1Q5VVJ2 828 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 CCDC73Q6ZRK6 1079 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 USP48Q86UV5 1035 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 DAGLBQ8NCG7 672 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 SLC44A5Q8NCS7 719 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 NLGN2Q8NFZ4 835 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 ZC3H15Q8WU90 426 aaKnown RBP8.58□□□□□ -1.04
LSG1-205ENST00000461343 FOXD4L4Q8WXT5 416 aaPredicted RBP8.58□□□□□ -1.04
LSG1-205ENST00000461343 LPAR1Q92633 364 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 ANP32BQ92688 251 aaKnown RBP8.58□□□□□ -1.04
LSG1-205ENST00000461343 MYL10Q9BUA6 226 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 ZNF341Q9BYN7 854 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 ADARB2Q9NS39 739 aaKnown RBP8.58□□□□□ -1.04
LSG1-205ENST00000461343 LMBRD1Q9NUN5 540 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 DDX19AQ9NUU7 478 aaKnown RBP8.58□□□□□ -1.04
LSG1-205ENST00000461343 MAD2L2Q9UI95 211 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 ZBTB12Q9Y330 459 aaPredicted RBP8.58□□□□□ -1.04
LSG1-205ENST00000461343 TACC3Q9Y6A5 838 aa8.58□□□□□ -1.04
LSG1-205ENST00000461343 MYH6P13533 1939 aa8.57□□□□□ -1.04
LSG1-205ENST00000461343 PNMA6FA0A0J9YX94 578 aa8.57□□□□□ -1.04
LSG1-205ENST00000461343 CLRN2A0PK11 232 aa8.57□□□□□ -1.04
LSG1-205ENST00000461343 DDTLA6NHG4 134 aaPredicted RBP8.57□□□□□ -1.04
LSG1-205ENST00000461343 LAD1O00515 517 aa8.57□□□□□ -1.04
LSG1-205ENST00000461343 NMT2O60551 498 aa8.57□□□□□ -1.04
LSG1-205ENST00000461343 PLA2G6O60733 806 aa8.57□□□□□ -1.04
LSG1-205ENST00000461343 PPP6R2O75170 966 aa8.57□□□□□ -1.04
LSG1-205ENST00000461343 CAVIN2O95810 425 aa8.57□□□□□ -1.04
LSG1-205ENST00000461343 NASPP49321 788 aaPredicted RBP8.57□□□□□ -1.04
LSG1-205ENST00000461343 ATP2B2Q01814 1243 aa8.57□□□□□ -1.04
LSG1-205ENST00000461343 RASSF7Q02833 373 aa8.57□□□□□ -1.04
LSG1-205ENST00000461343 ZNF543Q08ER8 600 aa8.57□□□□□ -1.04
LSG1-205ENST00000461343 FUT2Q10981 343 aa8.57□□□□□ -1.04
LSG1-205ENST00000461343 COL9A3Q14050 684 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms