RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 PTPREP23469 700 aa17.77■□□□□ 0.44
SMPD4-216ENST00000461187 SLC44A5Q8NCS7 719 aa17.77■□□□□ 0.44
SMPD4-216ENST00000461187 FLRT1Q9NZU1 646 aa17.77■□□□□ 0.44
SMPD4-216ENST00000461187 PRKAB2O43741 272 aa17.76■□□□□ 0.43
SMPD4-216ENST00000461187 WDR78Q5VTH9 848 aa17.76■□□□□ 0.43
SMPD4-216ENST00000461187 DYNLL2Q96FJ2 89 aa17.76■□□□□ 0.43
SMPD4-216ENST00000461187 HAUS7Q99871 368 aa17.76■□□□□ 0.43
SMPD4-216ENST00000461187 GDF15Q99988 308 aa17.76■□□□□ 0.43
SMPD4-216ENST00000461187 CHMP4BQ9H444 224 aaKnown RBP17.76■□□□□ 0.43
SMPD4-216ENST00000461187 SWAP70Q9UH65 585 aa17.76■□□□□ 0.43
SMPD4-216ENST00000461187 RCAN3Q9UKA8 241 aa17.76■□□□□ 0.43
SMPD4-216ENST00000461187 ZMYND8Q9ULU4 1186 aaPredicted RBP17.76■□□□□ 0.43
SMPD4-216ENST00000461187 MBD4O95243 580 aa17.75■□□□□ 0.43
SMPD4-216ENST00000461187 CHGBP05060 677 aa17.75■□□□□ 0.43
SMPD4-216ENST00000461187 COL6A1P12109 1028 aa17.75■□□□□ 0.43
SMPD4-216ENST00000461187 GRB14Q14449 540 aa17.75■□□□□ 0.43
SMPD4-216ENST00000461187 COG2Q14746 738 aa17.75■□□□□ 0.43
SMPD4-216ENST00000461187 KIAA1755Q5JYT7 1200 aa17.75■□□□□ 0.43
SMPD4-216ENST00000461187 TMEM179Q6ZVK1 233 aa17.75■□□□□ 0.43
SMPD4-216ENST00000461187 ATP8A2Q9NTI2 1148 aa17.75■□□□□ 0.43
SMPD4-216ENST00000461187 COL6A3P12111 3177 aa17.75■□□□□ 0.43
SMPD4-216ENST00000461187 SMIM22K7EJ46 135 aa17.74■□□□□ 0.43
SMPD4-216ENST00000461187 SOX1O00570 391 aaPredicted RBP17.74■□□□□ 0.43
SMPD4-216ENST00000461187 HOXC6P09630 235 aa17.74■□□□□ 0.43
SMPD4-216ENST00000461187 BMP8BP34820 402 aa17.74■□□□□ 0.43
SMPD4-216ENST00000461187 SIAH1Q8IUQ4 282 aa17.74■□□□□ 0.43
SMPD4-216ENST00000461187 NPLOC4Q8TAT6 608 aa17.74■□□□□ 0.43
SMPD4-216ENST00000461187 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.74■□□□□ 0.43
SMPD4-216ENST00000461187 HOXC10Q9NYD6 342 aa17.74■□□□□ 0.43
SMPD4-216ENST00000461187 IVNS1ABPQ9Y6Y0 642 aa17.74■□□□□ 0.43
SMPD4-216ENST00000461187 IGHA2P01877 340 aa17.73■□□□□ 0.43
SMPD4-216ENST00000461187 AKR1B1P15121 316 aa17.73■□□□□ 0.43
SMPD4-216ENST00000461187 SYN1P17600 705 aa17.73■□□□□ 0.43
SMPD4-216ENST00000461187 C20orf194Q5TEA3 1177 aa17.73■□□□□ 0.43
SMPD4-216ENST00000461187 C12orf60Q5U649 245 aa17.73■□□□□ 0.43
SMPD4-216ENST00000461187 MFSD14CQ5VZR4 134 aa17.73■□□□□ 0.43
SMPD4-216ENST00000461187 CLEC10AQ8IUN9 316 aa17.73■□□□□ 0.43
SMPD4-216ENST00000461187 MOV10L1Q9BXT6 1211 aaKnown RBP17.73■□□□□ 0.43
SMPD4-216ENST00000461187 TANGO6Q9C0B7 1094 aa17.73■□□□□ 0.43
SMPD4-216ENST00000461187 MCM3APO60318 1980 aa17.73■□□□□ 0.43
SMPD4-216ENST00000461187 CYP2D7A0A087X1C5 515 aa17.72■□□□□ 0.43
SMPD4-216ENST00000461187 CDK8P49336 464 aa17.72■□□□□ 0.43
SMPD4-216ENST00000461187 ATP2B2Q01814 1243 aa17.72■□□□□ 0.43
SMPD4-216ENST00000461187 UBE3CQ15386 1083 aa17.72■□□□□ 0.43
SMPD4-216ENST00000461187 LRRCC1Q9C099 1032 aa17.72■□□□□ 0.43
SMPD4-216ENST00000461187 SPATC1LQ9H0A9 340 aa17.72■□□□□ 0.43
SMPD4-216ENST00000461187 TMX2Q9Y320 296 aa17.72■□□□□ 0.43
SMPD4-216ENST00000461187 LTBP2Q14767 1821 aa17.72■□□□□ 0.43
SMPD4-216ENST00000461187 USP17L12C9JPN9 530 aa17.71■□□□□ 0.43
SMPD4-216ENST00000461187 USP17L21D6R901 530 aa17.71■□□□□ 0.43
SMPD4-216ENST00000461187 SMARCA5O60264 1052 aaPredicted RBP17.71■□□□□ 0.43
SMPD4-216ENST00000461187 DSG3P32926 999 aa17.71■□□□□ 0.43
SMPD4-216ENST00000461187 ICA1Q05084 483 aa17.71■□□□□ 0.43
SMPD4-216ENST00000461187 LPAR1Q92633 364 aa17.71■□□□□ 0.43
SMPD4-216ENST00000461187 LRCH3Q96II8 777 aa17.71■□□□□ 0.43
SMPD4-216ENST00000461187 CCDC17Q96LX7 622 aa17.71■□□□□ 0.43
SMPD4-216ENST00000461187 ARHGEF10LQ9HCE6 1279 aa17.71■□□□□ 0.43
SMPD4-216ENST00000461187 STRNO43815 780 aa17.7■□□□□ 0.42
SMPD4-216ENST00000461187 ADORA2AP29274 412 aa17.7■□□□□ 0.42
SMPD4-216ENST00000461187 CYP2C19P33261 490 aa17.7■□□□□ 0.42
SMPD4-216ENST00000461187 MAGEA10P43363 369 aaPredicted RBP17.7■□□□□ 0.42
SMPD4-216ENST00000461187 LRRC26Q2I0M4 334 aa17.7■□□□□ 0.42
SMPD4-216ENST00000461187 C16orf86Q6ZW13 317 aa17.7■□□□□ 0.42
SMPD4-216ENST00000461187 MB21D1Q8N884 522 aa17.7■□□□□ 0.42
SMPD4-216ENST00000461187 SHCBP1Q8NEM2 672 aa17.7■□□□□ 0.42
SMPD4-216ENST00000461187 TRPV1Q8NER1 839 aa17.7■□□□□ 0.42
SMPD4-216ENST00000461187 PUS7LQ9H0K6 701 aaKnown RBP17.7■□□□□ 0.42
SMPD4-216ENST00000461187 VCPKMTQ9H867 229 aa17.7■□□□□ 0.42
SMPD4-216ENST00000461187 DDX20Q9UHI6 824 aaKnown RBP17.7■□□□□ 0.42
SMPD4-216ENST00000461187 SLC4A4Q9Y6R1 1079 aa17.7■□□□□ 0.42
SMPD4-216ENST00000461187 LAMA2P24043 3122 aaKnown RBP17.7■□□□□ 0.42
SMPD4-216ENST00000461187 FLOT1O75955 427 aa17.69■□□□□ 0.42
SMPD4-216ENST00000461187 ERCC3P19447 782 aa17.69■□□□□ 0.42
SMPD4-216ENST00000461187 CNGA1P29973 690 aa17.69■□□□□ 0.42
SMPD4-216ENST00000461187 DPP9Q86TI2 863 aa17.69■□□□□ 0.42
SMPD4-216ENST00000461187 AMOTL1Q8IY63 956 aa17.69■□□□□ 0.42
SMPD4-216ENST00000461187 SPICE1Q8N0Z3 855 aa17.69■□□□□ 0.42
SMPD4-216ENST00000461187 SH2D4AQ9H788 454 aa17.69■□□□□ 0.42
SMPD4-216ENST00000461187 WDR46O15213 610 aaKnown RBP17.68■□□□□ 0.42
SMPD4-216ENST00000461187 MSCO60682 206 aa17.68■□□□□ 0.42
SMPD4-216ENST00000461187 COBLO75128 1261 aa17.68■□□□□ 0.42
SMPD4-216ENST00000461187 CYBAP13498 195 aa17.68■□□□□ 0.42
SMPD4-216ENST00000461187 OLFML2BQ68BL8 750 aa17.68■□□□□ 0.42
SMPD4-216ENST00000461187 ZSCAN25Q6NSZ9 544 aa17.68■□□□□ 0.42
SMPD4-216ENST00000461187 CTR9Q6PD62 1173 aa17.68■□□□□ 0.42
SMPD4-216ENST00000461187 ATG4CQ96DT6 458 aa17.68■□□□□ 0.42
SMPD4-216ENST00000461187 DDRGK1Q96HY6 314 aa17.68■□□□□ 0.42
SMPD4-216ENST00000461187 EEF2P13639 858 aaKnown RBP17.67■□□□□ 0.42
SMPD4-216ENST00000461187 PLS1Q14651 629 aa17.67■□□□□ 0.42
SMPD4-216ENST00000461187 SENP6Q9GZR1 1112 aaPredicted RBP17.67■□□□□ 0.42
SMPD4-216ENST00000461187 MROH8Q9H579 483 aa17.67■□□□□ 0.42
SMPD4-216ENST00000461187 ADAMTS5Q9UNA0 930 aa17.67■□□□□ 0.42
SMPD4-216ENST00000461187 NCAPG2Q86XI2 1143 aa17.66■□□□□ 0.42
SMPD4-216ENST00000461187 ABRAQ8N0Z2 381 aa17.66■□□□□ 0.42
SMPD4-216ENST00000461187 STRBPQ96SI9 672 aaKnown RBP17.66■□□□□ 0.42
SMPD4-216ENST00000461187 KANSL2Q9H9L4 492 aa17.66■□□□□ 0.42
SMPD4-216ENST00000461187 ECHDC1Q9NTX5 307 aa17.66■□□□□ 0.42
SMPD4-216ENST00000461187 DNM1LO00429 736 aa17.65■□□□□ 0.42
SMPD4-216ENST00000461187 TMEM132BQ14DG7 1078 aa17.65■□□□□ 0.42
SMPD4-216ENST00000461187 LRIT3Q3SXY7 679 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms