RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 SHHQ15465 462 aa16.51■□□□□ 0.23
SCAMP4-206ENST00000460767 OLFML2BQ68BL8 750 aa16.51■□□□□ 0.23
SCAMP4-206ENST00000460767 RIOK1Q9BRS2 568 aaKnown RBP16.51■□□□□ 0.23
SCAMP4-206ENST00000460767 TTYH1Q9H313 450 aaPredicted RBP16.51■□□□□ 0.23
SCAMP4-206ENST00000460767 TTC41PQ6P2S7 1318 aa16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 GDF11O95390 407 aa16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 USP14P54578 494 aa16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 MAP3K12Q12852 859 aa16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 SHROOM1Q2M3G4 852 aaPredicted RBP16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 C9orf50Q5SZB4 431 aa16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 TATDN1Q6P1N9 297 aa16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 SLC39A5Q6ZMH5 540 aa16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 CATSPERGQ6ZRH7 1159 aa16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 CRACR2BQ8N4Y2 399 aaPredicted RBP16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 ARRDC4Q8NCT1 418 aa16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 TRIM34Q9BYJ4 488 aa16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 KIAA1683Q9H0B3 1180 aa16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 BOLA2Q9H3K6 86 aa16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 CWC22Q9HCG8 908 aaKnown RBP16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 PAG1Q9NWQ8 432 aa16.5■□□□□ 0.23
SCAMP4-206ENST00000460767 AATFQ9NY61 560 aaKnown RBP eCLIP16.5■□□□□ 0.235e-6■■□□□ 11.7
SCAMP4-206ENST00000460767 MYH1P12882 1939 aa16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 GOLIM4O00461 696 aa16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 IDH1O75874 414 aaKnown RBP16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 HLA-DOAP06340 250 aa16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 PDE6AP16499 860 aa16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 ATN1P54259 1190 aaPredicted RBP16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 ATP2B2Q01814 1243 aa16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 CERS3Q8IU89 383 aa16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 MAGEB6Q8N7X4 407 aa16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 TRPV1Q8NER1 839 aa16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 NPLOC4Q8TAT6 608 aa16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 TGFBRAP1Q8WUH2 860 aa16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 EHD4Q9H223 541 aa16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 PDLIM7Q9NR12 457 aa16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 IVNS1ABPQ9Y6Y0 642 aa16.49■□□□□ 0.23
SCAMP4-206ENST00000460767 VCAM1P19320 739 aa16.48■□□□□ 0.23
SCAMP4-206ENST00000460767 CYP7A1P22680 504 aa16.48■□□□□ 0.23
SCAMP4-206ENST00000460767 MAPKAPK5Q8IW41 473 aa16.48■□□□□ 0.23
SCAMP4-206ENST00000460767 MYLIPQ8WY64 445 aa16.48■□□□□ 0.23
SCAMP4-206ENST00000460767 PALD1Q9ULE6 856 aa16.48■□□□□ 0.23
SCAMP4-206ENST00000460767 ROBO3Q96MS0 1386 aa16.48■□□□□ 0.23
SCAMP4-206ENST00000460767 VCANP13611 3396 aa16.47■□□□□ 0.23
SCAMP4-206ENST00000460767 SPDYE16A6NNV3 312 aaPredicted RBP16.47■□□□□ 0.23
SCAMP4-206ENST00000460767 KBTBD13C9JR72 458 aa16.47■□□□□ 0.23
SCAMP4-206ENST00000460767 SEPT4O43236 478 aa16.47■□□□□ 0.23
SCAMP4-206ENST00000460767 STRNO43815 780 aa16.47■□□□□ 0.23
SCAMP4-206ENST00000460767 FOSL2P15408 326 aa16.47■□□□□ 0.23
SCAMP4-206ENST00000460767 CYP2C19P33261 490 aa16.47■□□□□ 0.23
SCAMP4-206ENST00000460767 ADD2P35612 726 aa16.47■□□□□ 0.23
SCAMP4-206ENST00000460767 TSHZ3Q63HK5 1081 aa16.47■□□□□ 0.23
SCAMP4-206ENST00000460767 DNAJC2Q99543 621 aaKnown RBP16.47■□□□□ 0.23
SCAMP4-206ENST00000460767 RWDD1Q9H446 243 aaPredicted RBP16.47■□□□□ 0.23
SCAMP4-206ENST00000460767 BTBD7Q9P203 1132 aa16.47■□□□□ 0.23
SCAMP4-206ENST00000460767 ATP11BQ9Y2G3 1177 aa16.47■□□□□ 0.23
SCAMP4-206ENST00000460767 GH2P01242 217 aa16.46■□□□□ 0.23
SCAMP4-206ENST00000460767 CHGBP05060 677 aa16.46■□□□□ 0.23
SCAMP4-206ENST00000460767 MX1P20591 662 aa16.46■□□□□ 0.23
SCAMP4-206ENST00000460767 CNGA1P29973 690 aa16.46■□□□□ 0.23
SCAMP4-206ENST00000460767 DYNLL1P63167 89 aaKnown RBP16.46■□□□□ 0.23
SCAMP4-206ENST00000460767 NUCB1Q02818 461 aa16.46■□□□□ 0.23
SCAMP4-206ENST00000460767 UBE3CQ15386 1083 aa16.46■□□□□ 0.23
SCAMP4-206ENST00000460767 SLC9C2Q5TAH2 1124 aa16.46■□□□□ 0.23
SCAMP4-206ENST00000460767 KBTBD3Q8NAB2 608 aa16.46■□□□□ 0.23
SCAMP4-206ENST00000460767 SHCBP1Q8NEM2 672 aa16.46■□□□□ 0.23
SCAMP4-206ENST00000460767 BADQ92934 168 aa16.46■□□□□ 0.23
SCAMP4-206ENST00000460767 FEZ1Q99689 392 aa16.46■□□□□ 0.23
SCAMP4-206ENST00000460767 ZNF532Q9HCE3 1301 aa16.45■□□□□ 0.22
SCAMP4-206ENST00000460767 TRIM60Q495X7 471 aa16.45■□□□□ 0.22
SCAMP4-206ENST00000460767 TJAP1Q5JTD0 557 aa16.45■□□□□ 0.22
SCAMP4-206ENST00000460767 GJC2Q5T442 439 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-206ENST00000460767 ANKRD45Q5TZF3 282 aa16.45■□□□□ 0.22
SCAMP4-206ENST00000460767 NAV1Q8NEY1 1877 aa16.44■□□□□ 0.22
SCAMP4-206ENST00000460767 TRIM43BA6NCK2 446 aa16.44■□□□□ 0.22
SCAMP4-206ENST00000460767 PDE1AP54750 535 aa16.44■□□□□ 0.22
SCAMP4-206ENST00000460767 SLFNL1Q499Z3 407 aa16.44■□□□□ 0.22
SCAMP4-206ENST00000460767 ABRAQ8N0Z2 381 aa16.44■□□□□ 0.22
SCAMP4-206ENST00000460767 MIGA1Q8NAN2 632 aa16.44■□□□□ 0.22
SCAMP4-206ENST00000460767 TRIM43Q96BQ3 446 aaPredicted RBP16.44■□□□□ 0.22
SCAMP4-206ENST00000460767 GPATCH3Q96I76 525 aa16.44■□□□□ 0.22
SCAMP4-206ENST00000460767 OSBPL3Q9H4L5 887 aa16.44■□□□□ 0.22
SCAMP4-206ENST00000460767 PRDM5Q9NQX1 630 aaPredicted RBP16.44■□□□□ 0.22
SCAMP4-206ENST00000460767 NRBP1Q9UHY1 535 aa16.44■□□□□ 0.22
SCAMP4-206ENST00000460767 SERPINB13Q9UIV8 391 aa16.44■□□□□ 0.22
SCAMP4-206ENST00000460767 EYSQ5T1H1 3165 aa16.44■□□□□ 0.22
SCAMP4-206ENST00000460767 PARP14Q460N5 1801 aa16.43■□□□□ 0.22
SCAMP4-206ENST00000460767 ADORA2AP29274 412 aa16.43■□□□□ 0.22
SCAMP4-206ENST00000460767 IRX6P78412 446 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-206ENST00000460767 WDR78Q5VTH9 848 aa16.43■□□□□ 0.22
SCAMP4-206ENST00000460767 SLC5A4Q9NY91 659 aa16.43■□□□□ 0.22
SCAMP4-206ENST00000460767 PHF24Q9UPV7 400 aa16.43■□□□□ 0.22
SCAMP4-206ENST00000460767 TACC3Q9Y6A5 838 aa16.43■□□□□ 0.22
SCAMP4-206ENST00000460767 TNFRSF10AO00220 468 aa16.42■□□□□ 0.22
SCAMP4-206ENST00000460767 KIAA0355O15063 1070 aa16.42■□□□□ 0.22
SCAMP4-206ENST00000460767 LRRC41Q15345 812 aa16.42■□□□□ 0.22
SCAMP4-206ENST00000460767 SH3RF1Q7Z6J0 888 aa16.42■□□□□ 0.22
SCAMP4-206ENST00000460767 DPP9Q86TI2 863 aa16.42■□□□□ 0.22
SCAMP4-206ENST00000460767 CHD1LQ86WJ1 897 aa16.42■□□□□ 0.22
SCAMP4-206ENST00000460767 MB21D1Q8N884 522 aa16.42■□□□□ 0.22
SCAMP4-206ENST00000460767 RNPC3Q96LT9 517 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms