RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 ZSCAN16Q9H4T2 348 aaPredicted RBP18.38■□□□□ 0.53
PCYT1A-212ENST00000460677 CNTNAP5Q8WYK1 1306 aa18.37■□□□□ 0.53
PCYT1A-212ENST00000460677 ZC3H4Q9UPT8 1303 aaKnown RBP18.37■□□□□ 0.53
PCYT1A-212ENST00000460677 GUCY1A2P33402 732 aa18.37■□□□□ 0.53
PCYT1A-212ENST00000460677 GUCY1B3Q02153 619 aa18.37■□□□□ 0.53
PCYT1A-212ENST00000460677 RRP1BQ14684 758 aaKnown RBP18.37■□□□□ 0.53
PCYT1A-212ENST00000460677 SEPT2Q15019 361 aa18.37■□□□□ 0.53
PCYT1A-212ENST00000460677 DPY19L2Q6NUT2 758 aa18.37■□□□□ 0.53
PCYT1A-212ENST00000460677 MKL1Q969V6 931 aa18.37■□□□□ 0.53
PCYT1A-212ENST00000460677 LZTS2Q9BRK4 669 aa18.37■□□□□ 0.53
PCYT1A-212ENST00000460677 DEFB129Q9H1M3 183 aa18.37■□□□□ 0.53
PCYT1A-212ENST00000460677 UBE2Q2LH0YL09 131 aa18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 GH2P01242 217 aa18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 PARP1P09874 1014 aaKnown RBP18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 HIRAP54198 1017 aaPredicted RBP18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 ICA1Q05084 483 aa18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 TRIM29Q14134 588 aa18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 SHROOM1Q2M3G4 852 aaPredicted RBP18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 FOXD4L6Q3SYB3 417 aaPredicted RBP18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 ANGEL2Q5VTE6 544 aaKnown RBP18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 OTUD7BQ6GQQ9 843 aa18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 FOXD4L3Q6VB84 417 aaPredicted RBP18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 MIGA2Q7L4E1 593 aa18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 LRRC47Q8N1G4 583 aaKnown RBP18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 STAG2Q8N3U4 1231 aa18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 CHAMP1Q96JM3 812 aa18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 ADARB2Q9NS39 739 aaKnown RBP18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 RBM27Q9P2N5 1060 aaKnown RBP18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 SCAF8Q9UPN6 1271 aaKnown RBP18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 MTMR7Q9Y216 660 aa18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 V9GY48 417 aaPredicted RBP18.36■□□□□ 0.53
PCYT1A-212ENST00000460677 SNHG28P0DPA3 235 aa18.35■□□□□ 0.53
PCYT1A-212ENST00000460677 PDHBP11177 359 aa18.35■□□□□ 0.53
PCYT1A-212ENST00000460677 EEF2P13639 858 aaKnown RBP18.35■□□□□ 0.53
PCYT1A-212ENST00000460677 JAG1P78504 1218 aa18.35■□□□□ 0.53
PCYT1A-212ENST00000460677 ATP2B2Q01814 1243 aa18.35■□□□□ 0.53
PCYT1A-212ENST00000460677 PKN1Q16512 942 aa18.35■□□□□ 0.53
PCYT1A-212ENST00000460677 KRT40Q6A162 431 aa18.35■□□□□ 0.53
PCYT1A-212ENST00000460677 USP17L5A8MUK1 530 aa18.34■□□□□ 0.53
PCYT1A-212ENST00000460677 SOCS7O14512 581 aa18.34■□□□□ 0.53
PCYT1A-212ENST00000460677 SMARCA1P28370 1054 aa18.34■□□□□ 0.53
PCYT1A-212ENST00000460677 ASPRV1Q53RT3 343 aa18.34■□□□□ 0.53
PCYT1A-212ENST00000460677 USP17L2Q6R6M4 530 aa18.34■□□□□ 0.53
PCYT1A-212ENST00000460677 SIAH1Q8IUQ4 282 aa18.34■□□□□ 0.53
PCYT1A-212ENST00000460677 L3MBTL3Q96JM7 780 aaPredicted RBP18.34■□□□□ 0.53
PCYT1A-212ENST00000460677 GJB4Q9NTQ9 266 aa18.34■□□□□ 0.53
PCYT1A-212ENST00000460677 GGA3Q9NZ52 723 aa18.34■□□□□ 0.53
PCYT1A-212ENST00000460677 KLRF2D3W0D1 207 aa18.33■□□□□ 0.53
PCYT1A-212ENST00000460677 XBP1P17861 261 aa18.33■□□□□ 0.53
PCYT1A-212ENST00000460677 CAP2P40123 477 aa18.33■□□□□ 0.53
PCYT1A-212ENST00000460677 DNM1Q05193 864 aaKnown RBP18.33■□□□□ 0.53
PCYT1A-212ENST00000460677 HOOK2Q96ED9 719 aa18.33■□□□□ 0.53
PCYT1A-212ENST00000460677 SPZ1Q9BXG8 430 aa18.33■□□□□ 0.53
PCYT1A-212ENST00000460677 SYNPO2Q9UMS6 1093 aa18.33■□□□□ 0.53
PCYT1A-212ENST00000460677 PPP2R3BQ9Y5P8 575 aa18.33■□□□□ 0.53
PCYT1A-212ENST00000460677 PITPNM2Q9BZ72 1349 aa18.33■□□□□ 0.52
PCYT1A-212ENST00000460677 MYH4Q9Y623 1939 aa18.33■□□□□ 0.52
PCYT1A-212ENST00000460677 PHF20L1A8MW92 1017 aa18.32■□□□□ 0.52
PCYT1A-212ENST00000460677 GOLGA8HP0CJ92 632 aa18.32■□□□□ 0.52
PCYT1A-212ENST00000460677 RASGRP2Q7LDG7 609 aa18.32■□□□□ 0.52
PCYT1A-212ENST00000460677 ANP32EQ9BTT0 268 aa18.32■□□□□ 0.52
PCYT1A-212ENST00000460677 ZBTB21Q9ULJ3 1066 aa18.32■□□□□ 0.52
PCYT1A-212ENST00000460677 MYH6P13533 1939 aa18.31■□□□□ 0.52
PCYT1A-212ENST00000460677 hCG_1642624A0A1W2PR95 340 aa18.31■□□□□ 0.52
PCYT1A-212ENST00000460677 SCG2P13521 617 aa18.31■□□□□ 0.52
PCYT1A-212ENST00000460677 KRT85P78386 507 aa18.31■□□□□ 0.52
PCYT1A-212ENST00000460677 KIF23Q02241 960 aaPredicted RBP18.31■□□□□ 0.52
PCYT1A-212ENST00000460677 ZNF543Q08ER8 600 aa18.31■□□□□ 0.52
PCYT1A-212ENST00000460677 PFKFB3Q16875 520 aaPredicted RBP18.31■□□□□ 0.52
PCYT1A-212ENST00000460677 SLC35G1Q2M3R5 365 aa18.31■□□□□ 0.52
PCYT1A-212ENST00000460677 NBPF12Q5TAG4 269 aaPredicted RBP18.31■□□□□ 0.52
PCYT1A-212ENST00000460677 DCAF15Q66K64 600 aa18.31■□□□□ 0.52
PCYT1A-212ENST00000460677 FAM173BQ6P4H8 233 aa18.31■□□□□ 0.52
PCYT1A-212ENST00000460677 BRAPQ7Z569 592 aa18.31■□□□□ 0.52
PCYT1A-212ENST00000460677 LMBRD1Q9NUN5 540 aa18.31■□□□□ 0.52
PCYT1A-212ENST00000460677 CNPY2Q9Y2B0 182 aa18.31■□□□□ 0.52
PCYT1A-212ENST00000460677 GLTPD2A6NH11 291 aa18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 CYTH3O43739 400 aa18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 PRPF40AO75400 957 aaKnown RBP18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 MMP1P03956 469 aa18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 NCLP19338 710 aaKnown RBP18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 GPATCH4Q5T3I0 446 aaKnown RBP18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 TMEM87AQ8NBN3 555 aa18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 GMCL1P1Q8NEA9 526 aa18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 DCAF4Q8WV16 495 aa18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 ARHGEF10LQ9HCE6 1279 aa18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 GINM1Q9NU53 330 aa18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 FRMPD2Q68DX3 1309 aaPredicted RBP18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 ASNSP08243 561 aa18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 SAFBQ15424 915 aaKnown RBP eCLIP18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 CSPP1Q1MSJ5 1256 aa18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 SLFN13Q68D06 897 aa18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 ATL3Q6DD88 541 aa18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 RIOX1Q9H6W3 641 aa18.3■□□□□ 0.52
PCYT1A-212ENST00000460677 KIF28PB7ZC32 967 aa18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 F5H6K3 240 aa18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 CTNND1O60716 968 aaKnown RBP18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 U2AF2P26368 475 aaKnown RBP eCLIP18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 KLRC3Q07444 240 aa18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 CCDC96Q2M329 555 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms