RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 EIF6P56537 245 aaKnown RBP6.96□□□□□ -1.3
VPS13D-202ENST00000460333 KCNQ4P56696 695 aa6.96□□□□□ -1.3
VPS13D-202ENST00000460333 ALX1Q15699 326 aa6.96□□□□□ -1.3
VPS13D-202ENST00000460333 CFAP58Q5T655 872 aa6.96□□□□□ -1.3
VPS13D-202ENST00000460333 ZNF444Q8N0Y2 327 aaPredicted RBP6.96□□□□□ -1.3
VPS13D-202ENST00000460333 MIGA1Q8NAN2 632 aa6.96□□□□□ -1.3
VPS13D-202ENST00000460333 MIPOL1Q8TD10 442 aa6.96□□□□□ -1.3
VPS13D-202ENST00000460333 RABGGTAQ92696 567 aa6.96□□□□□ -1.3
VPS13D-202ENST00000460333 PIH1D3Q9NQM4 214 aaKnown RBP6.96□□□□□ -1.3
VPS13D-202ENST00000460333 PUF60Q9UHX1 559 aaKnown RBP6.96□□□□□ -1.3
VPS13D-202ENST00000460333 CEP83Q9Y592 693 aa6.96□□□□□ -1.3
VPS13D-202ENST00000460333 BUB1BO60566 1050 aaPredicted RBP6.95□□□□□ -1.3
VPS13D-202ENST00000460333 PHACTR2O75167 634 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 UFL1O94874 794 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 SERPINB2P05120 415 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 RHOXF2BP0C7M4 288 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 PDE6BP35913 854 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 HNRNPH2P55795 449 aaKnown RBP6.95□□□□□ -1.3
VPS13D-202ENST00000460333 IRX5P78411 483 aaPredicted RBP6.95□□□□□ -1.3
VPS13D-202ENST00000460333 NEDD9Q14511 834 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 WHAMMP3Q1A5X7 153 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 AKNAD1Q5T1N1 836 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 RHOXF2Q9BQY4 288 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 MINPP1Q9UNW1 487 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 BCS1LQ9Y276 419 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 COL16A1Q07092 1604 aaPredicted RBP6.95□□□□□ -1.3
VPS13D-202ENST00000460333 AKR1B15C9JRZ8 316 aaPredicted RBP6.95□□□□□ -1.3
VPS13D-202ENST00000460333 GOLGA8KD6RF30 607 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 ERCC3P19447 782 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 ETF1P62495 437 aaKnown RBP6.95□□□□□ -1.3
VPS13D-202ENST00000460333 MMS22LQ6ZRQ5 1243 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 CACNA2D4Q7Z3S7 1137 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 ILDR1Q86SU0 546 aaPredicted RBP6.95□□□□□ -1.3
VPS13D-202ENST00000460333 TEX2Q8IWB9 1127 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 ZC3H12CQ9C0D7 883 aaKnown RBP6.95□□□□□ -1.3
VPS13D-202ENST00000460333 PUS7LQ9H0K6 701 aaKnown RBP6.95□□□□□ -1.3
VPS13D-202ENST00000460333 YY1AP1Q9H869 796 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 SAMD15Q9P1V8 674 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 PYCARDQ9ULZ3 195 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 PHLPP2Q6ZVD8 1323 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 N4BP3O15049 544 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 CCDC6Q16204 474 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 RTN1Q16799 776 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 KLHL10Q6JEL2 608 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 BRAPQ7Z569 592 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 CPLX4Q7Z7G2 160 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 MICU3Q86XE3 530 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 LRRC8AQ8IWT6 810 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 FBXO18Q8NFZ0 1043 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 NWD2Q9ULI1 1742 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 PPFIA4O75335 1185 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 LUC7L3O95232 432 aaKnown RBP6.95□□□□□ -1.3
VPS13D-202ENST00000460333 ERCC6LQ2NKX8 1250 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 CEP85LQ5SZL2 805 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 TDRD7Q8NHU6 1098 aaKnown RBP6.95□□□□□ -1.3
VPS13D-202ENST00000460333 TSG101Q99816 390 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 IL25Q9H293 177 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 SPON1Q9HCB6 807 aa6.95□□□□□ -1.3
VPS13D-202ENST00000460333 GADD45BO75293 160 aaPredicted RBP6.94□□□□□ -1.3
VPS13D-202ENST00000460333 ATP11AP98196 1134 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 PI16Q6UXB8 463 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 CROCCP2Q86T23 111 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 CCDC113Q9H0I3 377 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 VCXQ9H320 206 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 MRVI1Q9Y6F6 885 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 GOLGA6BA6NDN3 693 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 TSPY2A6NKD2 308 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 B4E1Z4 1266 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 MYO1CO00159 1063 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 FGFR2P21802 821 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 GCKP35557 465 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 IFIT1BQ5T764 474 aaKnown RBP6.94□□□□□ -1.3
VPS13D-202ENST00000460333 CHST3Q7LGC8 479 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 STRBPQ96SI9 672 aaKnown RBP6.94□□□□□ -1.3
VPS13D-202ENST00000460333 MTA3Q9BTC8 594 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 PLCH1Q4KWH8 1693 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 ZEB2O60315 1214 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 KIF4AO95239 1232 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 ZSCAN20P17040 1043 aaPredicted RBP6.94□□□□□ -1.3
VPS13D-202ENST00000460333 GBP1P32455 592 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 NCBP1Q09161 790 aaKnown RBP6.94□□□□□ -1.3
VPS13D-202ENST00000460333 CCDC43Q96MW1 224 aaKnown RBP6.94□□□□□ -1.3
VPS13D-202ENST00000460333 SELENOOQ9BVL4 669 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 TRIM7Q9C029 511 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 BMP2KQ9NSY1 1161 aaPredicted RBP6.94□□□□□ -1.3
VPS13D-202ENST00000460333 ARPP21Q9UBL0 812 aaPredicted RBP6.94□□□□□ -1.3
VPS13D-202ENST00000460333 MTMR6Q9Y217 621 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 SPTLC2O15270 562 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 GNAQP50148 359 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 PPARAQ07869 468 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 SCARF1Q14162 830 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 KARSQ15046 597 aaKnown RBP6.94□□□□□ -1.3
VPS13D-202ENST00000460333 ARHGAP27Q6ZUM4 889 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 ALG1Q9BT22 464 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 ATP8A2Q9NTI2 1148 aa6.94□□□□□ -1.3
VPS13D-202ENST00000460333 FANCCQ00597 558 aa6.93□□□□□ -1.3
VPS13D-202ENST00000460333 ATP2B2Q01814 1243 aa6.93□□□□□ -1.3
VPS13D-202ENST00000460333 APBA1Q02410 837 aa6.93□□□□□ -1.3
VPS13D-202ENST00000460333 KIF5AQ12840 1032 aa6.93□□□□□ -1.3
VPS13D-202ENST00000460333 ZKSCAN8Q15776 578 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms