RNA–Protein interactions for RNA: ENST00000460177.1

LCNL1-203, Transcript of lipocalin like 1, humanhuman

TSL 1 (best)

Gene LCNL1, Length 1,704 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-203ENST00000460177 PALM3A6NDB9 673 aaPredicted RBP25.85■■□□□ 1.73
LCNL1-203ENST00000460177 MPHOSPH10O00566 681 aaKnown RBP25.85■■□□□ 1.73
LCNL1-203ENST00000460177 UBE2HP62256 183 aa25.85■■□□□ 1.73
LCNL1-203ENST00000460177 GSE1Q14687 1217 aa25.85■■□□□ 1.73
LCNL1-203ENST00000460177 NBPF9Q3BBW0 867 aa25.85■■□□□ 1.73
LCNL1-203ENST00000460177 ATL3Q6DD88 541 aa25.85■■□□□ 1.73
LCNL1-203ENST00000460177 SPATA32Q96LK8 384 aa25.85■■□□□ 1.73
LCNL1-203ENST00000460177 ZNF396Q96N95 335 aaPredicted RBP25.85■■□□□ 1.73
LCNL1-203ENST00000460177 MTMR7Q9Y216 660 aa25.85■■□□□ 1.73
LCNL1-203ENST00000460177 hCG_1642624A0A1W2PR95 340 aa25.85■■□□□ 1.73
LCNL1-203ENST00000460177 MYO1BO43795 1136 aa25.85■■□□□ 1.73
LCNL1-203ENST00000460177 TTLL1O95922 423 aa25.85■■□□□ 1.73
LCNL1-203ENST00000460177 MMP1P03956 469 aa25.85■■□□□ 1.73
LCNL1-203ENST00000460177 GNAQP50148 359 aa25.85■■□□□ 1.73
LCNL1-203ENST00000460177 CERKLQ49MI3 558 aaPredicted RBP25.85■■□□□ 1.73
LCNL1-203ENST00000460177 DPF2Q92785 391 aa25.85■■□□□ 1.73
LCNL1-203ENST00000460177 SHISA4Q96DD7 197 aa25.85■■□□□ 1.73
LCNL1-203ENST00000460177 GJA3Q9Y6H8 435 aa25.85■■□□□ 1.73
LCNL1-203ENST00000460177 ARHGAP27Q6ZUM4 889 aa25.84■■□□□ 1.73
LCNL1-203ENST00000460177 FAM83AQ86UY5 434 aa25.84■■□□□ 1.73
LCNL1-203ENST00000460177 LRRC47Q8N1G4 583 aaKnown RBP25.84■■□□□ 1.73
LCNL1-203ENST00000460177 USP28Q96RU2 1077 aa25.84■■□□□ 1.73
LCNL1-203ENST00000460177 FTOQ9C0B1 505 aaKnown RBP eCLIP25.84■■□□□ 1.73
LCNL1-203ENST00000460177 CFAP45Q9UL16 551 aa25.84■■□□□ 1.73
LCNL1-203ENST00000460177 KCNJ14Q9UNX9 436 aa25.84■■□□□ 1.73
LCNL1-203ENST00000460177 SHROOM1Q2M3G4 852 aaPredicted RBP25.83■■□□□ 1.73
LCNL1-203ENST00000460177 SLC35G1Q2M3R5 365 aa25.83■■□□□ 1.73
LCNL1-203ENST00000460177 MYSM1Q5VVJ2 828 aa25.83■■□□□ 1.73
LCNL1-203ENST00000460177 CAVIN1Q6NZI2 390 aaKnown RBP25.83■■□□□ 1.73
LCNL1-203ENST00000460177 MICALL2Q8IY33 904 aa25.83■■□□□ 1.73
LCNL1-203ENST00000460177 EGFRP00533 1210 aa25.83■■□□□ 1.72
LCNL1-203ENST00000460177 LMNB1P20700 586 aa25.83■■□□□ 1.72
LCNL1-203ENST00000460177 U2AF2P26368 475 aaKnown RBP eCLIP25.83■■□□□ 1.72
LCNL1-203ENST00000460177 VPS54Q9P1Q0 977 aa25.83■■□□□ 1.72
LCNL1-203ENST00000460177 RBM27Q9P2N5 1060 aaKnown RBP25.83■■□□□ 1.72
LCNL1-203ENST00000460177 HERC5Q9UII4 1024 aaKnown RBP25.83■■□□□ 1.72
LCNL1-203ENST00000460177 PARP1P09874 1014 aaKnown RBP25.82■■□□□ 1.72
LCNL1-203ENST00000460177 PPP4R3BQ5MIZ7 849 aa25.82■■□□□ 1.72
LCNL1-203ENST00000460177 LZTS2Q9BRK4 669 aa25.82■■□□□ 1.72
LCNL1-203ENST00000460177 CLIP2Q9UDT6 1046 aa25.82■■□□□ 1.72
LCNL1-203ENST00000460177 PDHBP11177 359 aa25.81■■□□□ 1.72
LCNL1-203ENST00000460177 PFKFB3Q16875 520 aaPredicted RBP25.81■■□□□ 1.72
LCNL1-203ENST00000460177 TMEM39BQ9GZU3 492 aa25.81■■□□□ 1.72
LCNL1-203ENST00000460177 USP17L5A8MUK1 530 aa25.8■■□□□ 1.72
LCNL1-203ENST00000460177 GDF11O95390 407 aa25.8■■□□□ 1.72
LCNL1-203ENST00000460177 GOLGA8HP0CJ92 632 aa25.8■■□□□ 1.72
LCNL1-203ENST00000460177 SNHG28P0DPA3 235 aa25.8■■□□□ 1.72
LCNL1-203ENST00000460177 SCG2P13521 617 aa25.8■■□□□ 1.72
LCNL1-203ENST00000460177 XBP1P17861 261 aa25.8■■□□□ 1.72
LCNL1-203ENST00000460177 GNL2Q13823 731 aaKnown RBP25.8■■□□□ 1.72
LCNL1-203ENST00000460177 SAFBQ15424 915 aaKnown RBP eCLIP25.8■■□□□ 1.72
LCNL1-203ENST00000460177 USP17L2Q6R6M4 530 aa25.8■■□□□ 1.72
LCNL1-203ENST00000460177 DIS3L2Q8IYB7 885 aaKnown RBP25.8■■□□□ 1.72
LCNL1-203ENST00000460177 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.8■■□□□ 1.72
LCNL1-203ENST00000460177 CNOT7Q9UIV1 285 aaKnown RBP25.8■■□□□ 1.72
LCNL1-203ENST00000460177 CYTH3O43739 400 aa25.8■■□□□ 1.72
LCNL1-203ENST00000460177 CEBPZQ03701 1054 aaKnown RBP25.8■■□□□ 1.72
LCNL1-203ENST00000460177 TMEM179Q6ZVK1 233 aa25.8■■□□□ 1.72
LCNL1-203ENST00000460177 CDAN1Q8IWY9 1227 aa25.8■■□□□ 1.72
LCNL1-203ENST00000460177 PHF20Q9BVI0 1012 aa25.8■■□□□ 1.72
LCNL1-203ENST00000460177 SPZ1Q9BXG8 430 aa25.8■■□□□ 1.72
LCNL1-203ENST00000460177 PGAP2Q9UHJ9 254 aa25.8■■□□□ 1.72
LCNL1-203ENST00000460177 RCOR1Q9UKL0 485 aa25.8■■□□□ 1.72
LCNL1-203ENST00000460177 KLRF2D3W0D1 207 aa25.79■■□□□ 1.72
LCNL1-203ENST00000460177 RRP1BQ14684 758 aaKnown RBP25.79■■□□□ 1.72
LCNL1-203ENST00000460177 ABCB5Q2M3G0 1257 aa25.79■■□□□ 1.72
LCNL1-203ENST00000460177 RBM26Q5T8P6 1007 aaKnown RBP25.79■■□□□ 1.72
LCNL1-203ENST00000460177 RTEL1Q9NZ71 1219 aa25.79■■□□□ 1.72
LCNL1-203ENST00000460177 TMEM63CQ9P1W3 806 aa25.79■■□□□ 1.72
LCNL1-203ENST00000460177 BTBD18B2RXH4 712 aa25.78■■□□□ 1.72
LCNL1-203ENST00000460177 SEPT2Q15019 361 aa25.78■■□□□ 1.72
LCNL1-203ENST00000460177 PIBF1Q8WXW3 757 aa25.78■■□□□ 1.72
LCNL1-203ENST00000460177 FOXP1Q9H334 677 aaPredicted RBP25.78■■□□□ 1.72
LCNL1-203ENST00000460177 KANSL2Q9H9L4 492 aa25.78■■□□□ 1.72
LCNL1-203ENST00000460177 NYAP2Q9P242 653 aa25.78■■□□□ 1.72
LCNL1-203ENST00000460177 JAG1P78504 1218 aa25.77■■□□□ 1.72
LCNL1-203ENST00000460177 ASPRV1Q53RT3 343 aa25.77■■□□□ 1.72
LCNL1-203ENST00000460177 SAMD7Q7Z3H4 446 aa25.77■■□□□ 1.72
LCNL1-203ENST00000460177 NOSTRINQ8IVI9 506 aa25.77■■□□□ 1.72
LCNL1-203ENST00000460177 TNNI2P48788 182 aa25.77■■□□□ 1.72
LCNL1-203ENST00000460177 ATP2B2Q01814 1243 aa25.77■■□□□ 1.72
LCNL1-203ENST00000460177 KIF4BQ2VIQ3 1234 aa25.77■■□□□ 1.72
LCNL1-203ENST00000460177 TBC1D10BQ4KMP7 808 aaPredicted RBP25.77■■□□□ 1.72
LCNL1-203ENST00000460177 TPRNQ4KMQ1 711 aa25.77■■□□□ 1.72
LCNL1-203ENST00000460177 PGBD1Q96JS3 809 aa25.77■■□□□ 1.72
LCNL1-203ENST00000460177 POLR3EQ9NVU0 708 aa25.77■■□□□ 1.72
LCNL1-203ENST00000460177 ATAD5Q96QE3 1844 aa25.76■■□□□ 1.71
LCNL1-203ENST00000460177 FRMPD2Q68DX3 1309 aaPredicted RBP25.76■■□□□ 1.71
LCNL1-203ENST00000460177 EEF2P13639 858 aaKnown RBP25.76■■□□□ 1.71
LCNL1-203ENST00000460177 VEGFAP15692 232 aaPredicted RBP25.76■■□□□ 1.71
LCNL1-203ENST00000460177 SMARCA1P28370 1054 aa25.76■■□□□ 1.71
LCNL1-203ENST00000460177 NASPP49321 788 aaPredicted RBP25.76■■□□□ 1.71
LCNL1-203ENST00000460177 ICA1Q05084 483 aa25.76■■□□□ 1.71
LCNL1-203ENST00000460177 OXER1Q8TDS5 423 aa25.76■■□□□ 1.71
LCNL1-203ENST00000460177 MKL1Q969V6 931 aa25.76■■□□□ 1.71
LCNL1-203ENST00000460177 CPVLQ9H3G5 476 aa25.76■■□□□ 1.71
LCNL1-203ENST00000460177 CLIC4Q9Y696 253 aa25.76■■□□□ 1.71
LCNL1-203ENST00000460177 TBC1D12O60347 775 aa25.75■■□□□ 1.71
LCNL1-203ENST00000460177 GH2P01242 217 aa25.75■■□□□ 1.71
LCNL1-203ENST00000460177 NR5A1Q13285 461 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms