RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 PALM3A6NDB9 673 aaPredicted RBP28.29■■■□□ 2.12
U2AF1-204ENST00000459639 UBE2Q2LH0YL09 131 aa28.29■■■□□ 2.12
U2AF1-204ENST00000459639 TBC1D12O60347 775 aa28.29■■■□□ 2.12
U2AF1-204ENST00000459639 NCLP19338 710 aaKnown RBP28.29■■■□□ 2.12
U2AF1-204ENST00000459639 TBC1D10BQ4KMP7 808 aaPredicted RBP28.29■■■□□ 2.12
U2AF1-204ENST00000459639 GJB4Q9NTQ9 266 aa28.29■■■□□ 2.12
U2AF1-204ENST00000459639 GPRC5DQ9NZD1 345 aa28.29■■■□□ 2.12
U2AF1-204ENST00000459639 ABCB5Q2M3G0 1257 aa28.29■■■□□ 2.12
U2AF1-204ENST00000459639 KANSL2Q9H9L4 492 aa28.29■■■□□ 2.12
U2AF1-204ENST00000459639 RNF181Q9P0P0 153 aa28.29■■■□□ 2.12
U2AF1-204ENST00000459639 PARP1P09874 1014 aaKnown RBP28.28■■■□□ 2.12
U2AF1-204ENST00000459639 PKN1Q16512 942 aa28.28■■■□□ 2.12
U2AF1-204ENST00000459639 FAM173BQ6P4H8 233 aa28.28■■■□□ 2.12
U2AF1-204ENST00000459639 BRAPQ7Z569 592 aa28.28■■■□□ 2.12
U2AF1-204ENST00000459639 CLEC10AQ8IUN9 316 aa28.28■■■□□ 2.12
U2AF1-204ENST00000459639 STAG2Q8N3U4 1231 aa28.28■■■□□ 2.12
U2AF1-204ENST00000459639 NYAP2Q9P242 653 aa28.28■■■□□ 2.12
U2AF1-204ENST00000459639 CLIP2Q9UDT6 1046 aa28.28■■■□□ 2.12
U2AF1-204ENST00000459639 V9GY48 417 aaPredicted RBP28.28■■■□□ 2.12
U2AF1-204ENST00000459639 KIF23Q02241 960 aaPredicted RBP28.27■■■□□ 2.12
U2AF1-204ENST00000459639 FIBPO43427 364 aa28.26■■■□□ 2.12
U2AF1-204ENST00000459639 XBP1P17861 261 aa28.26■■■□□ 2.12
U2AF1-204ENST00000459639 ATL3Q6DD88 541 aa28.26■■■□□ 2.12
U2AF1-204ENST00000459639 USP48Q86UV5 1035 aa28.26■■■□□ 2.12
U2AF1-204ENST00000459639 LRRC47Q8N1G4 583 aaKnown RBP28.26■■■□□ 2.12
U2AF1-204ENST00000459639 GDPD2Q9HCC8 539 aa28.26■■■□□ 2.12
U2AF1-204ENST00000459639 SNHG28P0DPA3 235 aa28.26■■■□□ 2.11
U2AF1-204ENST00000459639 PDHBP11177 359 aa28.26■■■□□ 2.11
U2AF1-204ENST00000459639 RASA3Q14644 834 aa28.26■■■□□ 2.11
U2AF1-204ENST00000459639 CABP5Q9NP86 173 aa28.26■■■□□ 2.11
U2AF1-204ENST00000459639 HACL1Q9UJ83 578 aa28.26■■■□□ 2.11
U2AF1-204ENST00000459639 MTMR7Q9Y216 660 aa28.26■■■□□ 2.11
U2AF1-204ENST00000459639 GDF11O95390 407 aa28.25■■■□□ 2.11
U2AF1-204ENST00000459639 SMARCA1P28370 1054 aa28.25■■■□□ 2.11
U2AF1-204ENST00000459639 MAP3K10Q02779 954 aa28.25■■■□□ 2.11
U2AF1-204ENST00000459639 MKL1Q969V6 931 aa28.25■■■□□ 2.11
U2AF1-204ENST00000459639 SPZ1Q9BXG8 430 aa28.25■■■□□ 2.11
U2AF1-204ENST00000459639 SCAND2PQ9GZW5 306 aaPredicted RBP28.25■■■□□ 2.11
U2AF1-204ENST00000459639 BAZ2BQ9UIF8 2168 aaKnown RBP28.24■■■□□ 2.11
U2AF1-204ENST00000459639 MMP1P03956 469 aa28.24■■■□□ 2.11
U2AF1-204ENST00000459639 ICA1Q05084 483 aa28.24■■■□□ 2.11
U2AF1-204ENST00000459639 SEPT2Q15019 361 aa28.24■■■□□ 2.11
U2AF1-204ENST00000459639 KLHL40Q2TBA0 621 aa28.24■■■□□ 2.11
U2AF1-204ENST00000459639 ASPRV1Q53RT3 343 aa28.24■■■□□ 2.11
U2AF1-204ENST00000459639 CDAN1Q8IWY9 1227 aa28.24■■■□□ 2.11
U2AF1-204ENST00000459639 ATAD5Q96QE3 1844 aa28.24■■■□□ 2.11
U2AF1-204ENST00000459639 KLRF2D3W0D1 207 aa28.23■■■□□ 2.11
U2AF1-204ENST00000459639 PFKFB3Q16875 520 aaPredicted RBP28.23■■■□□ 2.11
U2AF1-204ENST00000459639 SHROOM1Q2M3G4 852 aaPredicted RBP28.23■■■□□ 2.11
U2AF1-204ENST00000459639 ZNF396Q96N95 335 aaPredicted RBP28.23■■■□□ 2.11
U2AF1-204ENST00000459639 CFAP45Q9UL16 551 aa28.23■■■□□ 2.11
U2AF1-204ENST00000459639 DDX49Q9Y6V7 483 aaKnown RBP28.23■■■□□ 2.11
U2AF1-204ENST00000459639 ELP1O95163 1332 aa28.23■■■□□ 2.11
U2AF1-204ENST00000459639 KIF28PB7ZC32 967 aa28.23■■■□□ 2.11
U2AF1-204ENST00000459639 SCG2P13521 617 aa28.23■■■□□ 2.11
U2AF1-204ENST00000459639 EEF2P13639 858 aaKnown RBP28.23■■■□□ 2.11
U2AF1-204ENST00000459639 RRP1BQ14684 758 aaKnown RBP28.23■■■□□ 2.11
U2AF1-204ENST00000459639 SAFBQ15424 915 aaKnown RBP eCLIP28.23■■■□□ 2.11
U2AF1-204ENST00000459639 C9orf131Q5VYM1 1079 aa28.23■■■□□ 2.11
U2AF1-204ENST00000459639 USP17L2Q6R6M4 530 aa28.23■■■□□ 2.11
U2AF1-204ENST00000459639 RASGRP2Q7LDG7 609 aa28.23■■■□□ 2.11
U2AF1-204ENST00000459639 TEPSINQ96N21 525 aa28.23■■■□□ 2.11
U2AF1-204ENST00000459639 ASTN2O75129 1339 aaPredicted RBP28.22■■■□□ 2.11
U2AF1-204ENST00000459639 USP17L5A8MUK1 530 aa28.22■■■□□ 2.11
U2AF1-204ENST00000459639 GH2P01242 217 aa28.22■■■□□ 2.11
U2AF1-204ENST00000459639 U2AF2P26368 475 aaKnown RBP eCLIP28.22■■■□□ 2.11
U2AF1-204ENST00000459639 ATP2B2Q01814 1243 aa28.22■■■□□ 2.11
U2AF1-204ENST00000459639 APOBEC3FQ8IUX4 373 aaKnown RBP28.22■■■□□ 2.11
U2AF1-204ENST00000459639 hCG_1642624A0A1W2PR95 340 aa28.21■■■□□ 2.11
U2AF1-204ENST00000459639 MBD3O95983 291 aa28.21■■■□□ 2.11
U2AF1-204ENST00000459639 GOLGA8HP0CJ92 632 aa28.21■■■□□ 2.11
U2AF1-204ENST00000459639 TRPM4Q8TD43 1214 aa28.21■■■□□ 2.11
U2AF1-204ENST00000459639 SYNPO2Q9UMS6 1093 aa28.21■■■□□ 2.11
U2AF1-204ENST00000459639 GNL2Q13823 731 aaKnown RBP28.2■■■□□ 2.11
U2AF1-204ENST00000459639 SLC35G1Q2M3R5 365 aa28.2■■■□□ 2.11
U2AF1-204ENST00000459639 CYTH3O43739 400 aa28.19■■■□□ 2.1
U2AF1-204ENST00000459639 JAG1P78504 1218 aa28.19■■■□□ 2.1
U2AF1-204ENST00000459639 ZNF543Q08ER8 600 aa28.19■■■□□ 2.1
U2AF1-204ENST00000459639 MYSM1Q5VVJ2 828 aa28.19■■■□□ 2.1
U2AF1-204ENST00000459639 PHF20Q9BVI0 1012 aa28.19■■■□□ 2.1
U2AF1-204ENST00000459639 FOXP1Q9H334 677 aaPredicted RBP28.19■■■□□ 2.1
U2AF1-204ENST00000459639 VPS54Q9P1Q0 977 aa28.19■■■□□ 2.1
U2AF1-204ENST00000459639 TFIP11Q9UBB9 837 aaKnown RBP28.19■■■□□ 2.1
U2AF1-204ENST00000459639 KCNJ14Q9UNX9 436 aa28.19■■■□□ 2.1
U2AF1-204ENST00000459639 DDNO94850 711 aaPredicted RBP28.19■■■□□ 2.1
U2AF1-204ENST00000459639 EPS15P42566 896 aa28.19■■■□□ 2.1
U2AF1-204ENST00000459639 GPATCH4Q5T3I0 446 aaKnown RBP28.19■■■□□ 2.1
U2AF1-204ENST00000459639 SIAH1Q8IUQ4 282 aa28.19■■■□□ 2.1
U2AF1-204ENST00000459639 DIS3L2Q8IYB7 885 aaKnown RBP28.19■■■□□ 2.1
U2AF1-204ENST00000459639 SPATA32Q96LK8 384 aa28.19■■■□□ 2.1
U2AF1-204ENST00000459639 DEFB129Q9H1M3 183 aa28.19■■■□□ 2.1
U2AF1-204ENST00000459639 ZBTB21Q9ULJ3 1066 aa28.19■■■□□ 2.1
U2AF1-204ENST00000459639 LMOD1P29536 600 aaPredicted RBP28.18■■■□□ 2.1
U2AF1-204ENST00000459639 UBE2HP62256 183 aa28.18■■■□□ 2.1
U2AF1-204ENST00000459639 MIGA2Q7L4E1 593 aa28.18■■■□□ 2.1
U2AF1-204ENST00000459639 LEO1Q8WVC0 666 aaPredicted RBP28.18■■■□□ 2.1
U2AF1-204ENST00000459639 SHISA4Q96DD7 197 aa28.18■■■□□ 2.1
U2AF1-204ENST00000459639 SH3GLB2Q9NR46 395 aa28.18■■■□□ 2.1
U2AF1-204ENST00000459639 ANGEL2Q5VTE6 544 aaKnown RBP28.17■■■□□ 2.1
U2AF1-204ENST00000459639 FAM177A1Q8N128 213 aaPredicted RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms