RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 SENP6Q9GZR1 1112 aaPredicted RBP14.47□□□□□ -0.09
LMCD1-206ENST00000456506 PDE6AP16499 860 aa14.46□□□□□ -0.09
LMCD1-206ENST00000456506 MFSD14CQ5VZR4 134 aa14.46□□□□□ -0.09
LMCD1-206ENST00000456506 FAM109BQ6ICB4 259 aaPredicted RBP14.46□□□□□ -0.09
LMCD1-206ENST00000456506 AACSQ86V21 672 aa14.46□□□□□ -0.09
LMCD1-206ENST00000456506 ITPRIPQ8IWB1 547 aa14.46□□□□□ -0.09
LMCD1-206ENST00000456506 GUCD1Q96NT3 240 aa14.46□□□□□ -0.09
LMCD1-206ENST00000456506 MAGEB6P1A0A0J9YX57 407 aa14.45□□□□□ -0.1
LMCD1-206ENST00000456506 SMIM22K7EJ46 135 aa14.45□□□□□ -0.1
LMCD1-206ENST00000456506 MSCO60682 206 aa14.45□□□□□ -0.1
LMCD1-206ENST00000456506 COBLO75128 1261 aa14.45□□□□□ -0.1
LMCD1-206ENST00000456506 CYP2D6P10635 497 aa14.45□□□□□ -0.1
LMCD1-206ENST00000456506 COG2Q14746 738 aa14.45□□□□□ -0.1
LMCD1-206ENST00000456506 SNX17Q15036 470 aa14.45□□□□□ -0.1
LMCD1-206ENST00000456506 OLFML2BQ68BL8 750 aa14.45□□□□□ -0.1
LMCD1-206ENST00000456506 LCORLQ8N3X6 602 aa14.45□□□□□ -0.1
LMCD1-206ENST00000456506 SLC44A5Q8NCS7 719 aa14.45□□□□□ -0.1
LMCD1-206ENST00000456506 SHCBP1Q8NEM2 672 aa14.45□□□□□ -0.1
LMCD1-206ENST00000456506 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.45□□□□□ -0.1
LMCD1-206ENST00000456506 GBF1Q92538 1859 aa14.45□□□□□ -0.1
LMCD1-206ENST00000456506 CABP5Q9NP86 173 aa14.45□□□□□ -0.1
LMCD1-206ENST00000456506 DCP1AQ9NPI6 582 aaPredicted RBP14.45□□□□□ -0.1
LMCD1-206ENST00000456506 ZNF532Q9HCE3 1301 aa14.44□□□□□ -0.1
LMCD1-206ENST00000456506 ADORA2AP29274 412 aa14.44□□□□□ -0.1
LMCD1-206ENST00000456506 ATN1P54259 1190 aaPredicted RBP14.44□□□□□ -0.1
LMCD1-206ENST00000456506 RTP1P59025 263 aa14.44□□□□□ -0.1
LMCD1-206ENST00000456506 ATP2B2Q01814 1243 aa14.44□□□□□ -0.1
LMCD1-206ENST00000456506 SLC9C2Q5TAH2 1124 aa14.44□□□□□ -0.1
LMCD1-206ENST00000456506 WDR78Q5VTH9 848 aa14.44□□□□□ -0.1
LMCD1-206ENST00000456506 ERC1Q8IUD2 1116 aa14.44□□□□□ -0.1
LMCD1-206ENST00000456506 CLEC10AQ8IUN9 316 aa14.44□□□□□ -0.1
LMCD1-206ENST00000456506 FTSJ3Q8IY81 847 aaKnown RBP14.44□□□□□ -0.1
LMCD1-206ENST00000456506 RHPN1Q8TCX5 695 aa14.44□□□□□ -0.1
LMCD1-206ENST00000456506 SDR42E1Q8WUS8 393 aa14.44□□□□□ -0.1
LMCD1-206ENST00000456506 SPATC1LQ9H0A9 340 aa14.44□□□□□ -0.1
LMCD1-206ENST00000456506 IL1RAPL2Q9NP60 686 aa14.44□□□□□ -0.1
LMCD1-206ENST00000456506 STRNO43815 780 aa14.43□□□□□ -0.1
LMCD1-206ENST00000456506 POLR3DP05423 398 aaPredicted RBP14.43□□□□□ -0.1
LMCD1-206ENST00000456506 ERCC3P19447 782 aa14.43□□□□□ -0.1
LMCD1-206ENST00000456506 SLFNL1Q499Z3 407 aa14.43□□□□□ -0.1
LMCD1-206ENST00000456506 GJC2Q5T442 439 aaPredicted RBP14.43□□□□□ -0.1
LMCD1-206ENST00000456506 SIRT2Q8IXJ6 389 aa14.43□□□□□ -0.1
LMCD1-206ENST00000456506 CRNKL1Q9BZJ0 848 aaKnown RBP14.43□□□□□ -0.1
LMCD1-206ENST00000456506 CWC22Q9HCG8 908 aaKnown RBP14.43□□□□□ -0.1
LMCD1-206ENST00000456506 MCM9Q9NXL9 1143 aa14.43□□□□□ -0.1
LMCD1-206ENST00000456506 HOXC10Q9NYD6 342 aa14.43□□□□□ -0.1
LMCD1-206ENST00000456506 ADAMTS5Q9UNA0 930 aa14.43□□□□□ -0.1
LMCD1-206ENST00000456506 IVNS1ABPQ9Y6Y0 642 aa14.43□□□□□ -0.1
LMCD1-206ENST00000456506 LRRC37A2A6NM11 1700 aa14.43□□□□□ -0.1
LMCD1-206ENST00000456506 SEPT4O43236 478 aa14.42□□□□□ -0.1
LMCD1-206ENST00000456506 CNGA1P29973 690 aa14.42□□□□□ -0.1
LMCD1-206ENST00000456506 DSG3P32926 999 aa14.42□□□□□ -0.1
LMCD1-206ENST00000456506 TTF1Q15361 905 aaPredicted RBP14.42□□□□□ -0.1
LMCD1-206ENST00000456506 SLC39A5Q6ZMH5 540 aa14.42□□□□□ -0.1
LMCD1-206ENST00000456506 TMEM179Q6ZVK1 233 aa14.42□□□□□ -0.1
LMCD1-206ENST00000456506 PANK1Q8TE04 598 aa14.42□□□□□ -0.1
LMCD1-206ENST00000456506 DYNLL2Q96FJ2 89 aa14.42□□□□□ -0.1
LMCD1-206ENST00000456506 TMX2Q9Y320 296 aa14.42□□□□□ -0.1
LMCD1-206ENST00000456506 LCTP09848 1927 aa14.42□□□□□ -0.1
LMCD1-206ENST00000456506 PRKAB2O43741 272 aa14.41□□□□□ -0.1
LMCD1-206ENST00000456506 CHGBP05060 677 aa14.41□□□□□ -0.1
LMCD1-206ENST00000456506 AKR1B1P15121 316 aa14.41□□□□□ -0.1
LMCD1-206ENST00000456506 C9orf50Q5SZB4 431 aa14.41□□□□□ -0.1
LMCD1-206ENST00000456506 C1orf53Q5VUE5 145 aa14.41□□□□□ -0.1
LMCD1-206ENST00000456506 ANO1Q5XXA6 986 aa14.41□□□□□ -0.1
LMCD1-206ENST00000456506 DPP9Q86TI2 863 aa14.41□□□□□ -0.1
LMCD1-206ENST00000456506 ABRAQ8N0Z2 381 aa14.41□□□□□ -0.1
LMCD1-206ENST00000456506 ATG4CQ96DT6 458 aa14.41□□□□□ -0.1
LMCD1-206ENST00000456506 MAML3Q96JK9 1138 aa14.41□□□□□ -0.1
LMCD1-206ENST00000456506 TANGO6Q9C0B7 1094 aa14.41□□□□□ -0.1
LMCD1-206ENST00000456506 ROBO3Q96MS0 1386 aa14.41□□□□□ -0.1
LMCD1-206ENST00000456506 ZBED9Q6R2W3 1325 aa14.41□□□□□ -0.1
LMCD1-206ENST00000456506 GOLIM4O00461 696 aa14.4□□□□□ -0.1
LMCD1-206ENST00000456506 ADD2P35612 726 aa14.4□□□□□ -0.1
LMCD1-206ENST00000456506 TMEM132BQ14DG7 1078 aa14.4□□□□□ -0.1
LMCD1-206ENST00000456506 SHHQ15465 462 aa14.4□□□□□ -0.1
LMCD1-206ENST00000456506 PRAMEF19Q5SWL8 479 aa14.4□□□□□ -0.1
LMCD1-206ENST00000456506 MB21D1Q8N884 522 aa14.4□□□□□ -0.1
LMCD1-206ENST00000456506 ARRDC4Q8NCT1 418 aa14.4□□□□□ -0.1
LMCD1-206ENST00000456506 COL25A1Q9BXS0 654 aaPredicted RBP14.4□□□□□ -0.1
LMCD1-206ENST00000456506 MROH8Q9H579 483 aa14.4□□□□□ -0.1
LMCD1-206ENST00000456506 VCPKMTQ9H867 229 aa14.4□□□□□ -0.1
LMCD1-206ENST00000456506 ARMT1Q9H993 441 aa14.4□□□□□ -0.1
LMCD1-206ENST00000456506 SWAP70Q9UH65 585 aa14.4□□□□□ -0.1
LMCD1-206ENST00000456506 CYP2D7A0A087X1C5 515 aa14.39□□□□□ -0.11
LMCD1-206ENST00000456506 MPHOSPH10O00566 681 aaKnown RBP14.39□□□□□ -0.11
LMCD1-206ENST00000456506 LRRC41Q15345 812 aa14.39□□□□□ -0.11
LMCD1-206ENST00000456506 TRIM60Q495X7 471 aa14.39□□□□□ -0.11
LMCD1-206ENST00000456506 FAM47AQ5JRC9 791 aa14.39□□□□□ -0.11
LMCD1-206ENST00000456506 C12orf60Q5U649 245 aa14.39□□□□□ -0.11
LMCD1-206ENST00000456506 SH3RF1Q7Z6J0 888 aa14.39□□□□□ -0.11
LMCD1-206ENST00000456506 REPS2Q8NFH8 660 aa14.39□□□□□ -0.11
LMCD1-206ENST00000456506 LBHD1Q9BQE6 289 aaPredicted RBP14.39□□□□□ -0.11
LMCD1-206ENST00000456506 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.39□□□□□ -0.11
LMCD1-206ENST00000456506 PDLIM7Q9NR12 457 aa14.39□□□□□ -0.11
LMCD1-206ENST00000456506 ATP11BQ9Y2G3 1177 aa14.39□□□□□ -0.11
LMCD1-206ENST00000456506 TRIM43BA6NCK2 446 aa14.38□□□□□ -0.11
LMCD1-206ENST00000456506 WDR46O15213 610 aaKnown RBP14.38□□□□□ -0.11
LMCD1-206ENST00000456506 FLOT1O75955 427 aa14.38□□□□□ -0.11
LMCD1-206ENST00000456506 ITGB8P26012 769 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms