RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 BOLA2Q9H3K6 86 aa22.65■■□□□ 1.22
COL20A1-204ENST00000455906 PRKAB2O43741 272 aa22.64■■□□□ 1.21
COL20A1-204ENST00000455906 HOXC6P09630 235 aa22.64■■□□□ 1.21
COL20A1-204ENST00000455906 BMP8BP34820 402 aa22.64■■□□□ 1.21
COL20A1-204ENST00000455906 KIAA1755Q5JYT7 1200 aa22.64■■□□□ 1.21
COL20A1-204ENST00000455906 WDR78Q5VTH9 848 aa22.64■■□□□ 1.21
COL20A1-204ENST00000455906 DYNLL2Q96FJ2 89 aa22.64■■□□□ 1.21
COL20A1-204ENST00000455906 SWAP70Q9UH65 585 aa22.64■■□□□ 1.21
COL20A1-204ENST00000455906 SMIM22K7EJ46 135 aa22.63■■□□□ 1.21
COL20A1-204ENST00000455906 MBD4O95243 580 aa22.63■■□□□ 1.21
COL20A1-204ENST00000455906 CHGBP05060 677 aa22.63■■□□□ 1.21
COL20A1-204ENST00000455906 TMEM179Q6ZVK1 233 aa22.63■■□□□ 1.21
COL20A1-204ENST00000455906 SIAH1Q8IUQ4 282 aa22.63■■□□□ 1.21
COL20A1-204ENST00000455906 HAUS7Q99871 368 aa22.63■■□□□ 1.21
COL20A1-204ENST00000455906 ZNF236Q9UL36 1845 aa22.63■■□□□ 1.21
COL20A1-204ENST00000455906 IGHA2P01877 340 aa22.62■■□□□ 1.21
COL20A1-204ENST00000455906 SYN1P17600 705 aa22.62■■□□□ 1.21
COL20A1-204ENST00000455906 COG2Q14746 738 aa22.62■■□□□ 1.21
COL20A1-204ENST00000455906 MFSD14CQ5VZR4 134 aa22.62■■□□□ 1.21
COL20A1-204ENST00000455906 NPLOC4Q8TAT6 608 aa22.62■■□□□ 1.21
COL20A1-204ENST00000455906 ATP8A2Q9NTI2 1148 aa22.62■■□□□ 1.21
COL20A1-204ENST00000455906 PARP14Q460N5 1801 aa22.61■■□□□ 1.21
COL20A1-204ENST00000455906 AKR1B1P15121 316 aa22.61■■□□□ 1.21
COL20A1-204ENST00000455906 CLEC10AQ8IUN9 316 aa22.61■■□□□ 1.21
COL20A1-204ENST00000455906 LRCH3Q96II8 777 aa22.61■■□□□ 1.21
COL20A1-204ENST00000455906 MOV10L1Q9BXT6 1211 aaKnown RBP22.61■■□□□ 1.21
COL20A1-204ENST00000455906 HOXC10Q9NYD6 342 aa22.61■■□□□ 1.21
COL20A1-204ENST00000455906 IVNS1ABPQ9Y6Y0 642 aa22.61■■□□□ 1.21
COL20A1-204ENST00000455906 CYP2D7A0A087X1C5 515 aa22.6■■□□□ 1.21
COL20A1-204ENST00000455906 C12orf60Q5U649 245 aa22.6■■□□□ 1.21
COL20A1-204ENST00000455906 TANGO6Q9C0B7 1094 aa22.6■■□□□ 1.21
COL20A1-204ENST00000455906 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.6■■□□□ 1.21
COL20A1-204ENST00000455906 SPATC1LQ9H0A9 340 aa22.6■■□□□ 1.21
COL20A1-204ENST00000455906 CHMP4BQ9H444 224 aaKnown RBP22.6■■□□□ 1.21
COL20A1-204ENST00000455906 RCAN3Q9UKA8 241 aa22.6■■□□□ 1.21
COL20A1-204ENST00000455906 CYP2C19P33261 490 aa22.59■■□□□ 1.21
COL20A1-204ENST00000455906 MAGEA10P43363 369 aaPredicted RBP22.59■■□□□ 1.21
COL20A1-204ENST00000455906 ATP2B2Q01814 1243 aa22.59■■□□□ 1.21
COL20A1-204ENST00000455906 UBE3CQ15386 1083 aa22.59■■□□□ 1.21
COL20A1-204ENST00000455906 LRRC26Q2I0M4 334 aa22.59■■□□□ 1.21
COL20A1-204ENST00000455906 C20orf194Q5TEA3 1177 aa22.59■■□□□ 1.21
COL20A1-204ENST00000455906 TRPV1Q8NER1 839 aa22.59■■□□□ 1.21
COL20A1-204ENST00000455906 TMX2Q9Y320 296 aa22.59■■□□□ 1.21
COL20A1-204ENST00000455906 DSG3P32926 999 aa22.58■■□□□ 1.21
COL20A1-204ENST00000455906 CDK8P49336 464 aa22.58■■□□□ 1.21
COL20A1-204ENST00000455906 ICA1Q05084 483 aa22.58■■□□□ 1.21
COL20A1-204ENST00000455906 LPAR1Q92633 364 aa22.58■■□□□ 1.21
COL20A1-204ENST00000455906 DDX20Q9UHI6 824 aaKnown RBP22.58■■□□□ 1.21
COL20A1-204ENST00000455906 LAMA2P24043 3122 aaKnown RBP22.57■■□□□ 1.2
COL20A1-204ENST00000455906 USP17L12C9JPN9 530 aa22.57■■□□□ 1.2
COL20A1-204ENST00000455906 USP17L21D6R901 530 aa22.57■■□□□ 1.2
COL20A1-204ENST00000455906 ERCC3P19447 782 aa22.57■■□□□ 1.2
COL20A1-204ENST00000455906 ADORA2AP29274 412 aa22.57■■□□□ 1.2
COL20A1-204ENST00000455906 C16orf86Q6ZW13 317 aa22.57■■□□□ 1.2
COL20A1-204ENST00000455906 SHCBP1Q8NEM2 672 aa22.57■■□□□ 1.2
COL20A1-204ENST00000455906 LRRCC1Q9C099 1032 aa22.57■■□□□ 1.2
COL20A1-204ENST00000455906 VCPKMTQ9H867 229 aa22.57■■□□□ 1.2
COL20A1-204ENST00000455906 ARHGEF10LQ9HCE6 1279 aa22.57■■□□□ 1.2
COL20A1-204ENST00000455906 SMARCA5O60264 1052 aaPredicted RBP22.56■■□□□ 1.2
COL20A1-204ENST00000455906 CYBAP13498 195 aa22.56■■□□□ 1.2
COL20A1-204ENST00000455906 SPICE1Q8N0Z3 855 aa22.56■■□□□ 1.2
COL20A1-204ENST00000455906 MB21D1Q8N884 522 aa22.56■■□□□ 1.2
COL20A1-204ENST00000455906 ATG4CQ96DT6 458 aa22.56■■□□□ 1.2
COL20A1-204ENST00000455906 CCDC17Q96LX7 622 aa22.56■■□□□ 1.2
COL20A1-204ENST00000455906 PUS7LQ9H0K6 701 aaKnown RBP22.56■■□□□ 1.2
COL20A1-204ENST00000455906 COL11A1P12107 1806 aaPredicted RBP22.56■■□□□ 1.2
COL20A1-204ENST00000455906 STRNO43815 780 aa22.55■■□□□ 1.2
COL20A1-204ENST00000455906 MSCO60682 206 aa22.55■■□□□ 1.2
COL20A1-204ENST00000455906 FLOT1O75955 427 aa22.55■■□□□ 1.2
COL20A1-204ENST00000455906 CNGA1P29973 690 aa22.55■■□□□ 1.2
COL20A1-204ENST00000455906 OLFML2BQ68BL8 750 aa22.55■■□□□ 1.2
COL20A1-204ENST00000455906 DPP9Q86TI2 863 aa22.55■■□□□ 1.2
COL20A1-204ENST00000455906 SH2D4AQ9H788 454 aa22.55■■□□□ 1.2
COL20A1-204ENST00000455906 SLC4A4Q9Y6R1 1079 aa22.55■■□□□ 1.2
COL20A1-204ENST00000455906 GREB1LQ9C091 1923 aaPredicted RBP22.55■■□□□ 1.2
COL20A1-204ENST00000455906 ZNFX1Q9P2E3 1918 aaKnown RBP22.55■■□□□ 1.2
COL20A1-204ENST00000455906 COBLO75128 1261 aa22.54■■□□□ 1.2
COL20A1-204ENST00000455906 CTR9Q6PD62 1173 aa22.54■■□□□ 1.2
COL20A1-204ENST00000455906 WDR46O15213 610 aaKnown RBP22.53■■□□□ 1.2
COL20A1-204ENST00000455906 LRIT3Q3SXY7 679 aa22.53■■□□□ 1.2
COL20A1-204ENST00000455906 AMOTL1Q8IY63 956 aa22.53■■□□□ 1.2
COL20A1-204ENST00000455906 TDHQ8IZJ6 230 aa22.53■■□□□ 1.2
COL20A1-204ENST00000455906 SENP6Q9GZR1 1112 aaPredicted RBP22.53■■□□□ 1.2
COL20A1-204ENST00000455906 MROH8Q9H579 483 aa22.53■■□□□ 1.2
COL20A1-204ENST00000455906 DNM1LO00429 736 aa22.52■■□□□ 1.2
COL20A1-204ENST00000455906 EEF2P13639 858 aaKnown RBP22.52■■□□□ 1.2
COL20A1-204ENST00000455906 PLS1Q14651 629 aa22.52■■□□□ 1.2
COL20A1-204ENST00000455906 ZSCAN25Q6NSZ9 544 aa22.52■■□□□ 1.2
COL20A1-204ENST00000455906 ABRAQ8N0Z2 381 aa22.52■■□□□ 1.2
COL20A1-204ENST00000455906 UBE2OQ9C0C9 1292 aaKnown RBP22.52■■□□□ 1.2
COL20A1-204ENST00000455906 ADAMTS5Q9UNA0 930 aa22.52■■□□□ 1.2
COL20A1-204ENST00000455906 A0A0C4DFX4 3053 aa22.51■■□□□ 1.19
COL20A1-204ENST00000455906 TMEM132BQ14DG7 1078 aa22.51■■□□□ 1.19
COL20A1-204ENST00000455906 GPR153Q6NV75 609 aa22.51■■□□□ 1.19
COL20A1-204ENST00000455906 NCAPG2Q86XI2 1143 aa22.51■■□□□ 1.19
COL20A1-204ENST00000455906 DDRGK1Q96HY6 314 aa22.51■■□□□ 1.19
COL20A1-204ENST00000455906 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.51■■□□□ 1.19
COL20A1-204ENST00000455906 KANSL2Q9H9L4 492 aa22.51■■□□□ 1.19
COL20A1-204ENST00000455906 ECHDC1Q9NTX5 307 aa22.51■■□□□ 1.19
COL20A1-204ENST00000455906 FBXO28Q9NVF7 368 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms