RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 PRAMEF19Q5SWL8 479 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MFSD14CQ5VZR4 134 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ZKSCAN2Q63HK3 967 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 CEP85Q6P2H3 762 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SH3RF1Q7Z6J0 888 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SIAH1Q8IUQ4 282 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 PANK1Q8TE04 598 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ATG4CQ96DT6 458 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 C12orf42Q96LP6 360 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 RIOK1Q9BRS2 568 aaKnown RBP7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 COL25A1Q9BXS0 654 aaPredicted RBP7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MOV10L1Q9BXT6 1211 aaKnown RBP7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 KIAA1683Q9H0B3 1180 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 RABGAP1Q9Y3P9 1069 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MYH7P12883 1935 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MCM3APO60318 1980 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SLC15A5A6NIM6 579 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 GOLIM4O00461 696 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 IPO8O15397 1037 aaKnown RBP7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 PRKAB2O43741 272 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 COBLO75128 1261 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 POLR3DP05423 398 aaPredicted RBP7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 AKR1B1P15121 316 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ERCC3P19447 782 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ATP2B2Q01814 1243 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 GABPAQ06546 454 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 TATDN1Q6P1N9 297 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 CATSPERGQ6ZRH7 1159 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 FOXP4Q8IVH2 680 aaPredicted RBP7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 LBHD1Q9BQE6 289 aaPredicted RBP7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 EHD4Q9H223 541 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ARMT1Q9H993 441 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 GPR108Q9NPR9 543 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 FBXO28Q9NVF7 368 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MCM9Q9NXL9 1143 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 IVNS1ABPQ9Y6Y0 642 aa7.29□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SMCHD1A6NHR9 2005 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ZNF532Q9HCE3 1301 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 CHD9Q3L8U1 2897 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 CHD7Q9P2D1 2997 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MYO9BQ13459 2157 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MAGEB6P1A0A0J9YX57 407 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 POTEB2H3BUK9 544 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 DNM1LO00429 736 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 RAD21O60216 631 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 FLOT1O75955 427 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MBD4O95243 580 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 PGK2P07205 417 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 TAL1P17542 331 aaPredicted RBP7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 EPHB4P54760 987 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 CCNA1P78396 465 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 IRX5P78411 483 aaPredicted RBP7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ATP8B2P98198 1209 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 HNRNPUQ00839 825 aaKnown RBP eCLIP7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ICA1Q05084 483 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MAP3K12Q12852 859 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SHHQ15465 462 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 NCAPG2Q86XI2 1143 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 STK11IPQ8N1F8 1099 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 GTF3C2Q8WUA4 911 aaPredicted RBP7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MYLIPQ8WY64 445 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 LPAR1Q92633 364 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 BADQ92934 168 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ZNF512BQ96KM6 892 aaPredicted RBP7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 NUP88Q99567 741 aaPredicted RBP7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SPATC1LQ9H0A9 340 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 PDLIM7Q9NR12 457 aa7.28□□□□□ -1.24
HLA-DPA3-207ENST00000454398 LRRC37A2A6NM11 1700 aa7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 GREB1LQ9C091 1923 aaPredicted RBP7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 TCRBV5S4A2TA0A5A2 114 aa7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 TRIM43BA6NCK2 446 aa7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 KBTBD13C9JR72 458 aa7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 PQBP1O60828 265 aaKnown RBP7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 PGK1P00558 417 aa7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 HOXC6P09630 235 aa7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 ADCYAP1R1P41586 468 aa7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 USP14P54578 494 aa7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 SLC9C2Q5TAH2 1124 aa7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 ZNF697Q5TEC3 545 aa7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 FAM109BQ6ICB4 259 aaPredicted RBP7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 LBX2Q6XYB7 198 aa7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 DPP9Q86TI2 863 aa7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 TRMT44Q8IYL2 757 aaKnown RBP7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 MAFAQ8NHW3 353 aaPredicted RBP7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 TRIM43Q96BQ3 446 aaPredicted RBP7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 CDX2Q99626 313 aaPredicted RBP7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 CRNKL1Q9BZJ0 848 aaKnown RBP7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 TTYH1Q9H313 450 aaPredicted RBP7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 DCP1AQ9NPI6 582 aaPredicted RBP7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 NOP58Q9Y2X3 529 aaKnown RBP7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 ZNFX1Q9P2E3 1918 aaKnown RBP7.27□□□□□ -1.25
HLA-DPA3-207ENST00000454398 MYADML2A6NDP7 307 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 GLRX3O76003 335 aaKnown RBP7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 PTGS1P23219 599 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 TMEM132BQ14DG7 1078 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 LRRC41Q15345 812 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 TSHZ3Q63HK5 1081 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 GPR153Q6NV75 609 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 TTC6Q86TZ1 520 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms