RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 NUP88Q99567 741 aaPredicted RBP16.91■□□□□ 0.3
RFTN1-207ENST00000453536 FBXO28Q9NVF7 368 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 FLRT1Q9NZU1 646 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 TTC41PQ6P2S7 1318 aa16.91■□□□□ 0.3
RFTN1-207ENST00000453536 GJA8P48165 433 aa16.9■□□□□ 0.3
RFTN1-207ENST00000453536 WDR78Q5VTH9 848 aa16.9■□□□□ 0.3
RFTN1-207ENST00000453536 ZSCAN25Q6NSZ9 544 aa16.9■□□□□ 0.3
RFTN1-207ENST00000453536 RASGRP2Q7LDG7 609 aa16.9■□□□□ 0.3
RFTN1-207ENST00000453536 ATG4CQ96DT6 458 aa16.9■□□□□ 0.3
RFTN1-207ENST00000453536 TANGO6Q9C0B7 1094 aa16.9■□□□□ 0.3
RFTN1-207ENST00000453536 SWAP70Q9UH65 585 aa16.9■□□□□ 0.3
RFTN1-207ENST00000453536 RANBP2P49792 3224 aaKnown RBP16.9■□□□□ 0.3
RFTN1-207ENST00000453536 PLXNA1Q9UIW2 1896 aa16.89■□□□□ 0.29
RFTN1-207ENST00000453536 GJB1P08034 283 aa16.89■□□□□ 0.29
RFTN1-207ENST00000453536 ZMYM1Q5SVZ6 1142 aa16.89■□□□□ 0.29
RFTN1-207ENST00000453536 UBE2Q1Q7Z7E8 422 aa16.89■□□□□ 0.29
RFTN1-207ENST00000453536 NKX2-3Q8TAU0 364 aa16.89■□□□□ 0.29
RFTN1-207ENST00000453536 USP6NLQ92738 828 aa16.89■□□□□ 0.29
RFTN1-207ENST00000453536 ROBO3Q96MS0 1386 aa16.89■□□□□ 0.29
RFTN1-207ENST00000453536 RAD21O60216 631 aa16.88■□□□□ 0.29
RFTN1-207ENST00000453536 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
RFTN1-207ENST00000453536 APPP05067 770 aa16.88■□□□□ 0.29
RFTN1-207ENST00000453536 CCND3P30281 292 aaPredicted RBP16.88■□□□□ 0.29
RFTN1-207ENST00000453536 USP14P54578 494 aa16.88■□□□□ 0.29
RFTN1-207ENST00000453536 PDE1AP54750 535 aa16.88■□□□□ 0.29
RFTN1-207ENST00000453536 UBXN2AP68543 259 aa16.88■□□□□ 0.29
RFTN1-207ENST00000453536 HDAC1Q13547 482 aaPredicted RBP16.88■□□□□ 0.29
RFTN1-207ENST00000453536 MORN1Q5T089 497 aa16.88■□□□□ 0.29
RFTN1-207ENST00000453536 IFNL3Q8IZI9 196 aa16.88■□□□□ 0.29
RFTN1-207ENST00000453536 PXYLP1Q8TE99 480 aa16.88■□□□□ 0.29
RFTN1-207ENST00000453536 FAM227BQ96M60 508 aa16.88■□□□□ 0.29
RFTN1-207ENST00000453536 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.88■□□□□ 0.29
RFTN1-207ENST00000453536 PAK6Q9NQU5 681 aaPredicted RBP16.88■□□□□ 0.29
RFTN1-207ENST00000453536 ARPP21Q9UBL0 812 aaPredicted RBP16.88■□□□□ 0.29
RFTN1-207ENST00000453536 TMX2Q9Y320 296 aa16.88■□□□□ 0.29
RFTN1-207ENST00000453536 SUPT16HQ9Y5B9 1047 aaKnown RBP16.88■□□□□ 0.29
RFTN1-207ENST00000453536 A0A0D9SFI3 127 aa16.87■□□□□ 0.29
RFTN1-207ENST00000453536 SGPL1O95470 568 aa16.87■□□□□ 0.29
RFTN1-207ENST00000453536 HMGCRP04035 888 aa16.87■□□□□ 0.29
RFTN1-207ENST00000453536 TDO2P48775 406 aa16.87■□□□□ 0.29
RFTN1-207ENST00000453536 PLEKHH3Q7Z736 793 aa16.87■□□□□ 0.29
RFTN1-207ENST00000453536 NPLOC4Q8TAT6 608 aa16.87■□□□□ 0.29
RFTN1-207ENST00000453536 MOV10L1Q9BXT6 1211 aaKnown RBP16.87■□□□□ 0.29
RFTN1-207ENST00000453536 VCPKMTQ9H867 229 aa16.87■□□□□ 0.29
RFTN1-207ENST00000453536 SMCHD1A6NHR9 2005 aa16.87■□□□□ 0.29
RFTN1-207ENST00000453536 DNAH12Q6ZR08 3092 aa16.87■□□□□ 0.29
RFTN1-207ENST00000453536 ZNF236Q9UL36 1845 aa16.86■□□□□ 0.29
RFTN1-207ENST00000453536 TRIOBPQ9H2D6 2365 aa16.86■□□□□ 0.29
RFTN1-207ENST00000453536 PRKAR2AP13861 404 aaKnown RBP16.86■□□□□ 0.29
RFTN1-207ENST00000453536 MNX1P50219 401 aaPredicted RBP16.86■□□□□ 0.29
RFTN1-207ENST00000453536 CTDSPL2Q05D32 466 aa16.86■□□□□ 0.29
RFTN1-207ENST00000453536 SBK1Q52WX2 424 aa16.86■□□□□ 0.29
RFTN1-207ENST00000453536 FAM47AQ5JRC9 791 aa16.86■□□□□ 0.29
RFTN1-207ENST00000453536 FAM83BQ5T0W9 1011 aa16.86■□□□□ 0.29
RFTN1-207ENST00000453536 NUDT12Q9BQG2 462 aa16.86■□□□□ 0.29
RFTN1-207ENST00000453536 RABGAP1Q9Y3P9 1069 aa16.86■□□□□ 0.29
RFTN1-207ENST00000453536 H0YGN5 161 aa16.85■□□□□ 0.29
RFTN1-207ENST00000453536 ERC2O15083 957 aa16.85■□□□□ 0.29
RFTN1-207ENST00000453536 FLOT1O75955 427 aa16.85■□□□□ 0.29
RFTN1-207ENST00000453536 FARP2O94887 1054 aaPredicted RBP16.85■□□□□ 0.29
RFTN1-207ENST00000453536 CACNB2Q08289 660 aaPredicted RBP16.85■□□□□ 0.29
RFTN1-207ENST00000453536 LBX2Q6XYB7 198 aa16.85■□□□□ 0.29
RFTN1-207ENST00000453536 ZNF589Q86UQ0 364 aaPredicted RBP16.85■□□□□ 0.29
RFTN1-207ENST00000453536 LRRC47Q8N1G4 583 aaKnown RBP16.85■□□□□ 0.29
RFTN1-207ENST00000453536 ARHGEF10LQ9HCE6 1279 aa16.85■□□□□ 0.29
RFTN1-207ENST00000453536 STAP2Q9UGK3 403 aa16.85■□□□□ 0.29
RFTN1-207ENST00000453536 SZT2Q5T011 3432 aa16.85■□□□□ 0.29
RFTN1-207ENST00000453536 MCM3APO60318 1980 aa16.84■□□□□ 0.29
RFTN1-207ENST00000453536 IGKV6D-41A0A0C4DH26 115 aa16.84■□□□□ 0.29
RFTN1-207ENST00000453536 NMT2O60551 498 aa16.84■□□□□ 0.29
RFTN1-207ENST00000453536 TFRCP02786 760 aaKnown RBP16.84■□□□□ 0.29
RFTN1-207ENST00000453536 ZFYP08048 801 aaPredicted RBP16.84■□□□□ 0.29
RFTN1-207ENST00000453536 MAPK4P31152 587 aa16.84■□□□□ 0.29
RFTN1-207ENST00000453536 DSG3P32926 999 aa16.84■□□□□ 0.29
RFTN1-207ENST00000453536 PLS1Q14651 629 aa16.84■□□□□ 0.29
RFTN1-207ENST00000453536 MAP3K21Q5TCX8 1036 aa16.84■□□□□ 0.29
RFTN1-207ENST00000453536 TRPV1Q8NER1 839 aa16.84■□□□□ 0.29
RFTN1-207ENST00000453536 PATL2C9JE40 543 aaKnown RBP16.83■□□□□ 0.28
RFTN1-207ENST00000453536 ZKSCAN1P17029 563 aaPredicted RBP16.83■□□□□ 0.28
RFTN1-207ENST00000453536 TAL1P17542 331 aaPredicted RBP16.83■□□□□ 0.28
RFTN1-207ENST00000453536 ERCC3P19447 782 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 PTPREP23469 700 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 CYP2C19P33261 490 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 MAP2K5Q13163 448 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 NMIQ13287 307 aaPredicted RBP16.83■□□□□ 0.28
RFTN1-207ENST00000453536 COG2Q14746 738 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 TMEM132BQ14DG7 1078 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 SMC5Q8IY18 1101 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 AMOTL1Q8IY63 956 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 GCC1Q96CN9 775 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 CEP95Q96GE4 821 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 DDRGK1Q96HY6 314 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 PAWRQ96IZ0 340 aaKnown RBP16.83■□□□□ 0.28
RFTN1-207ENST00000453536 CCDC17Q96LX7 622 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 SPATC1LQ9H0A9 340 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 CRISPLD2Q9H0B8 497 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 MKNK2Q9HBH9 465 aa16.83■□□□□ 0.28
RFTN1-207ENST00000453536 COBLO75128 1261 aa16.82■□□□□ 0.28
RFTN1-207ENST00000453536 NDUFB10O96000 172 aa16.82■□□□□ 0.28
RFTN1-207ENST00000453536 PPARAQ07869 468 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms