RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 SSRP1Q08945 709 aaKnown RBP6.98□□□□□ -1.29
SDC4P-201ENST00000453285 RESTQ13127 1097 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 SEPT2Q15019 361 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 GPR162Q16538 588 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 ABCB5Q2M3G0 1257 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 ANGEL2Q5VTE6 544 aaKnown RBP6.98□□□□□ -1.29
SDC4P-201ENST00000453285 OTUD7BQ6GQQ9 843 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 TMEM179Q6ZVK1 233 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 RASGRP2Q7LDG7 609 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 FBXO18Q8NFZ0 1043 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 CTCFLQ8NI51 663 aaPredicted RBP6.98□□□□□ -1.29
SDC4P-201ENST00000453285 SHISA4Q96DD7 197 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 L3MBTL3Q96JM7 780 aaPredicted RBP6.98□□□□□ -1.29
SDC4P-201ENST00000453285 ALG1Q9BT22 464 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 SLC26A6Q9BXS9 759 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 RNF26Q9BY78 433 aaPredicted RBP6.98□□□□□ -1.29
SDC4P-201ENST00000453285 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.98□□□□□ -1.29
SDC4P-201ENST00000453285 GJB4Q9NTQ9 266 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 NYAP2Q9P242 653 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 CLIP2Q9UDT6 1046 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 KIF3AQ9Y496 699 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 UTRNP46939 3433 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 COL11A1P12107 1806 aaPredicted RBP6.97□□□□□ -1.29
SDC4P-201ENST00000453285 USP17L5A8MUK1 530 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 MPHOSPH10O00566 681 aaKnown RBP6.97□□□□□ -1.29
SDC4P-201ENST00000453285 CYTH3O43739 400 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 DEXIO95424 95 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 GH2P01242 217 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 PDHBP11177 359 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 EEF2P13639 858 aaKnown RBP6.97□□□□□ -1.29
SDC4P-201ENST00000453285 VEGFAP15692 232 aaPredicted RBP6.97□□□□□ -1.29
SDC4P-201ENST00000453285 SMARCA1P28370 1054 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 KIF5BP33176 963 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 CAP2P40123 477 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 FOSBP53539 338 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 GUCY1B3Q02153 619 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 TNFAIP1Q13829 316 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 NBPF12Q5TAG4 269 aaPredicted RBP6.97□□□□□ -1.29
SDC4P-201ENST00000453285 USP17L2Q6R6M4 530 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 MIGA2Q7L4E1 593 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 FERMT3Q86UX7 667 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 APOBEC3FQ8IUX4 373 aaKnown RBP6.97□□□□□ -1.29
SDC4P-201ENST00000453285 LRRC47Q8N1G4 583 aaKnown RBP6.97□□□□□ -1.29
SDC4P-201ENST00000453285 CCDC82Q8N4S0 544 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 C8orf76Q96K31 380 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 GBP4Q96PP9 640 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 TRIM34Q9BYJ4 488 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 DEFB129Q9H1M3 183 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 KANSL2Q9H9L4 492 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 ADARB2Q9NS39 739 aaKnown RBP6.97□□□□□ -1.29
SDC4P-201ENST00000453285 V9GY48 417 aaPredicted RBP6.97□□□□□ -1.29
SDC4P-201ENST00000453285 PITPNM2Q9BZ72 1349 aa6.97□□□□□ -1.29
SDC4P-201ENST00000453285 ZC3H4Q9UPT8 1303 aaKnown RBP6.97□□□□□ -1.29
SDC4P-201ENST00000453285 SSC5DA1L4H1 1573 aa6.96□□□□□ -1.29
SDC4P-201ENST00000453285 hCG_1642624A0A1W2PR95 340 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 A0A1W2PRG0 241 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 GLTPD2A6NH11 291 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 POTECB2RU33 542 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 KIF28PB7ZC32 967 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 KLRF2D3W0D1 207 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 H3BQV1 296 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 GOLGA8HP0CJ92 632 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 GNAQP50148 359 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 DNM1Q05193 864 aaKnown RBP6.96□□□□□ -1.3
SDC4P-201ENST00000453285 PPP4R3BQ5MIZ7 849 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 KRT40Q6A162 431 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 MCTP1Q6DN14 999 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 DPY19L2Q6NUT2 758 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 FAM173BQ6P4H8 233 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 TRIM22Q8IYM9 498 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 WASF1Q92558 559 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 ZSCAN16Q9H4T2 348 aaPredicted RBP6.96□□□□□ -1.3
SDC4P-201ENST00000453285 RIOX1Q9H6W3 641 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 CABP5Q9NP86 173 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 LMBRD1Q9NUN5 540 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 GGA3Q9NZ52 723 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 ZNF112Q9UJU3 913 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 ZBTB21Q9ULJ3 1066 aa6.96□□□□□ -1.3
SDC4P-201ENST00000453285 F5H6K3 240 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 PARP1P09874 1014 aaKnown RBP6.95□□□□□ -1.3
SDC4P-201ENST00000453285 LMOD1P29536 600 aaPredicted RBP6.95□□□□□ -1.3
SDC4P-201ENST00000453285 KIF23Q02241 960 aaPredicted RBP6.95□□□□□ -1.3
SDC4P-201ENST00000453285 ICA1Q05084 483 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 KLRC3Q07444 240 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 ZNF543Q08ER8 600 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 NBR1Q14596 966 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 NPY5RQ15761 445 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 PFKFB3Q16875 520 aaPredicted RBP6.95□□□□□ -1.3
SDC4P-201ENST00000453285 FOXD4L6Q3SYB3 417 aaPredicted RBP6.95□□□□□ -1.3
SDC4P-201ENST00000453285 ASPRV1Q53RT3 343 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 KIAA1755Q5JYT7 1200 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 PRAMEF18Q5VWM3 479 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 TTBK2Q6IQ55 1244 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 FOXD4L3Q6VB84 417 aaPredicted RBP6.95□□□□□ -1.3
SDC4P-201ENST00000453285 TMEM87AQ8NBN3 555 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 GMCL1P1Q8NEA9 526 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 ACER1Q8TDN7 264 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 LZTS2Q9BRK4 669 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 SPZ1Q9BXG8 430 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 UBA5Q9GZZ9 404 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms