RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 SMIM22K7EJ46 135 aa14.25□□□□□ -0.13
SMPD4-212ENST00000451542 WDR46O15213 610 aaKnown RBP14.25□□□□□ -0.13
SMPD4-212ENST00000451542 FOXP2O15409 715 aa14.25□□□□□ -0.13
SMPD4-212ENST00000451542 PSMC4P43686 418 aa14.25□□□□□ -0.13
SMPD4-212ENST00000451542 HERVK_113P62684 666 aa14.25□□□□□ -0.13
SMPD4-212ENST00000451542 RRP12Q5JTH9 1297 aaKnown RBP14.25□□□□□ -0.13
SMPD4-212ENST00000451542 AKNAD1Q5T1N1 836 aa14.25□□□□□ -0.13
SMPD4-212ENST00000451542 CATSPERGQ6ZRH7 1159 aa14.25□□□□□ -0.13
SMPD4-212ENST00000451542 OTOP1Q7RTM1 612 aa14.25□□□□□ -0.13
SMPD4-212ENST00000451542 ANKRD13CQ8N6S4 541 aa14.25□□□□□ -0.13
SMPD4-212ENST00000451542 TANGO6Q9C0B7 1094 aa14.25□□□□□ -0.13
SMPD4-212ENST00000451542 RPAP3Q9H6T3 665 aaPredicted RBP14.25□□□□□ -0.13
SMPD4-212ENST00000451542 A0A1W2PRG0 241 aa14.24□□□□□ -0.13
SMPD4-212ENST00000451542 HAND2P61296 217 aa14.24□□□□□ -0.13
SMPD4-212ENST00000451542 CCNA1P78396 465 aa14.24□□□□□ -0.13
SMPD4-212ENST00000451542 COG2Q14746 738 aa14.24□□□□□ -0.13
SMPD4-212ENST00000451542 CCDC178Q5BJE1 867 aa14.24□□□□□ -0.13
SMPD4-212ENST00000451542 GPRC5AQ8NFJ5 357 aa14.24□□□□□ -0.13
SMPD4-212ENST00000451542 ESR2Q92731 530 aa14.24□□□□□ -0.13
SMPD4-212ENST00000451542 COA7Q96BR5 231 aa14.24□□□□□ -0.13
SMPD4-212ENST00000451542 ABHD8Q96I13 439 aa14.24□□□□□ -0.13
SMPD4-212ENST00000451542 P2RX7Q99572 595 aaKnown RBP14.24□□□□□ -0.13
SMPD4-212ENST00000451542 CWC22Q9HCG8 908 aaKnown RBP14.24□□□□□ -0.13
SMPD4-212ENST00000451542 MTMR4Q9NYA4 1195 aa14.24□□□□□ -0.13
SMPD4-212ENST00000451542 CLIP2Q9UDT6 1046 aa14.24□□□□□ -0.13
SMPD4-212ENST00000451542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMPD4-212ENST00000451542 PLIN4Q96Q06 1357 aa14.23□□□□□ -0.13
SMPD4-212ENST00000451542 TNPO2O14787 897 aaKnown RBP14.23□□□□□ -0.13
SMPD4-212ENST00000451542 SGSM2O43147 1006 aa14.23□□□□□ -0.13
SMPD4-212ENST00000451542 FGRP09769 529 aa14.23□□□□□ -0.13
SMPD4-212ENST00000451542 TRDNQ13061 729 aa14.23□□□□□ -0.13
SMPD4-212ENST00000451542 FAM47AQ5JRC9 791 aa14.23□□□□□ -0.13
SMPD4-212ENST00000451542 CLEC10AQ8IUN9 316 aa14.23□□□□□ -0.13
SMPD4-212ENST00000451542 STAG1Q8WVM7 1258 aa14.23□□□□□ -0.13
SMPD4-212ENST00000451542 CEP95Q96GE4 821 aa14.23□□□□□ -0.13
SMPD4-212ENST00000451542 KRT23Q9C075 422 aa14.23□□□□□ -0.13
SMPD4-212ENST00000451542 CNNM2Q9H8M5 875 aa14.23□□□□□ -0.13
SMPD4-212ENST00000451542 MORF4L1Q9UBU8 362 aa14.23□□□□□ -0.13
SMPD4-212ENST00000451542 STX8Q9UNK0 236 aa14.23□□□□□ -0.13
SMPD4-212ENST00000451542 PTPN22Q9Y2R2 807 aa14.23□□□□□ -0.13
SMPD4-212ENST00000451542 RABGAP1Q9Y3P9 1069 aa14.23□□□□□ -0.13
SMPD4-212ENST00000451542 U3KPZ7 1027 aaPredicted RBP14.23□□□□□ -0.13
SMPD4-212ENST00000451542 MYPNQ86TC9 1320 aa14.22□□□□□ -0.13
SMPD4-212ENST00000451542 IGKV6D-41A0A0C4DH26 115 aa14.22□□□□□ -0.13
SMPD4-212ENST00000451542 F5H6K3 240 aa14.22□□□□□ -0.13
SMPD4-212ENST00000451542 FLOT1O75955 427 aa14.22□□□□□ -0.13
SMPD4-212ENST00000451542 KLRC3Q07444 240 aa14.22□□□□□ -0.13
SMPD4-212ENST00000451542 LBX2Q6XYB7 198 aa14.22□□□□□ -0.13
SMPD4-212ENST00000451542 NBPF11Q86T75 865 aa14.22□□□□□ -0.13
SMPD4-212ENST00000451542 IQCA1Q86XH1 822 aa14.22□□□□□ -0.13
SMPD4-212ENST00000451542 SIAH1Q8IUQ4 282 aa14.22□□□□□ -0.13
SMPD4-212ENST00000451542 SPICE1Q8N0Z3 855 aa14.22□□□□□ -0.13
SMPD4-212ENST00000451542 MB21D1Q8N884 522 aa14.22□□□□□ -0.13
SMPD4-212ENST00000451542 MKL1Q969V6 931 aa14.22□□□□□ -0.13
SMPD4-212ENST00000451542 PAGR1Q9BTK6 254 aa14.22□□□□□ -0.13
SMPD4-212ENST00000451542 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.22□□□□□ -0.13
SMPD4-212ENST00000451542 GREB1LQ9C091 1923 aaPredicted RBP14.21□□□□□ -0.13
SMPD4-212ENST00000451542 MYH4Q9Y623 1939 aa14.21□□□□□ -0.13
SMPD4-212ENST00000451542 CDC45O75419 566 aa14.21□□□□□ -0.13
SMPD4-212ENST00000451542 MAPK4P31152 587 aa14.21□□□□□ -0.13
SMPD4-212ENST00000451542 RAET1EQ8TD07 263 aa14.21□□□□□ -0.13
SMPD4-212ENST00000451542 TTC14Q96N46 770 aa14.21□□□□□ -0.13
SMPD4-212ENST00000451542 TCP11L1Q9NUJ3 509 aa14.21□□□□□ -0.13
SMPD4-212ENST00000451542 SRRDQ9UH36 339 aa14.21□□□□□ -0.13
SMPD4-212ENST00000451542 ISY1Q9ULR0 285 aaKnown RBP14.21□□□□□ -0.13
SMPD4-212ENST00000451542 CTDP1Q9Y5B0 961 aaPredicted RBP14.21□□□□□ -0.13
SMPD4-212ENST00000451542 CCDC85CA6NKD9 419 aa14.2□□□□□ -0.14
SMPD4-212ENST00000451542 ECM2O94769 699 aaPredicted RBP14.2□□□□□ -0.14
SMPD4-212ENST00000451542 DSG3P32926 999 aa14.2□□□□□ -0.14
SMPD4-212ENST00000451542 ERVK-9P63128 1117 aa14.2□□□□□ -0.14
SMPD4-212ENST00000451542 ERVK-24P63145 666 aa14.2□□□□□ -0.14
SMPD4-212ENST00000451542 GMCL1P1Q8NEA9 526 aa14.2□□□□□ -0.14
SMPD4-212ENST00000451542 TRIM47Q96LD4 638 aa14.2□□□□□ -0.14
SMPD4-212ENST00000451542 HPS5Q9UPZ3 1129 aa14.2□□□□□ -0.14
SMPD4-212ENST00000451542 MGAMO43451 1857 aa14.19□□□□□ -0.14
SMPD4-212ENST00000451542 SPDYE16A6NNV3 312 aaPredicted RBP14.19□□□□□ -0.14
SMPD4-212ENST00000451542 NDUFB10O96000 172 aa14.19□□□□□ -0.14
SMPD4-212ENST00000451542 SLC9C1Q4G0N8 1177 aa14.19□□□□□ -0.14
SMPD4-212ENST00000451542 FAM83BQ5T0W9 1011 aa14.19□□□□□ -0.14
SMPD4-212ENST00000451542 IFFO2Q5TF58 517 aa14.19□□□□□ -0.14
SMPD4-212ENST00000451542 SLFN13Q68D06 897 aa14.19□□□□□ -0.14
SMPD4-212ENST00000451542 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
SMPD4-212ENST00000451542 RALYLQ86SE5 291 aaKnown RBP14.19□□□□□ -0.14
SMPD4-212ENST00000451542 TBC1D10CQ8IV04 446 aa14.19□□□□□ -0.14
SMPD4-212ENST00000451542 LRRC47Q8N1G4 583 aaKnown RBP14.19□□□□□ -0.14
SMPD4-212ENST00000451542 ESYT1Q9BSJ8 1104 aa14.19□□□□□ -0.14
SMPD4-212ENST00000451542 ARHGAP39Q9C0H5 1083 aa14.19□□□□□ -0.14
SMPD4-212ENST00000451542 INCENPQ9NQS7 918 aa14.19□□□□□ -0.14
SMPD4-212ENST00000451542 RBPJLQ9UBG7 517 aa14.19□□□□□ -0.14
SMPD4-212ENST00000451542 IVNS1ABPQ9Y6Y0 642 aa14.19□□□□□ -0.14
SMPD4-212ENST00000451542 LAMA4Q16363 1823 aa14.18□□□□□ -0.14
SMPD4-212ENST00000451542 FDX1P10109 184 aa14.18□□□□□ -0.14
SMPD4-212ENST00000451542 TOP1P11387 765 aaKnown RBP14.18□□□□□ -0.14
SMPD4-212ENST00000451542 BMP3P12645 472 aa14.18□□□□□ -0.14
SMPD4-212ENST00000451542 COPB2P35606 906 aa14.18□□□□□ -0.14
SMPD4-212ENST00000451542 SLC1A4P43007 532 aa14.18□□□□□ -0.14
SMPD4-212ENST00000451542 RNF20Q5VTR2 975 aa14.18□□□□□ -0.14
SMPD4-212ENST00000451542 CHURC1Q8WUH1 139 aa14.18□□□□□ -0.14
SMPD4-212ENST00000451542 SOCS4Q8WXH5 440 aa14.18□□□□□ -0.14
SMPD4-212ENST00000451542 MAP4K1Q92918 833 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms