RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 OTUD7BQ6GQQ9 843 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 CLEC10AQ8IUN9 316 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 STAG2Q8N3U4 1231 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 CCDC82Q8N4S0 544 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 TMEM87AQ8NBN3 555 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 TRPM4Q8TD43 1214 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 MKL1Q969V6 931 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 KANSL2Q9H9L4 492 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 LMBRD1Q9NUN5 540 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 CLIP2Q9UDT6 1046 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 HACL1Q9UJ83 578 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 DDNO94850 711 aaPredicted RBP13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 GDF11O95390 407 aa13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 PARP1P09874 1014 aaKnown RBP13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 JAG1P78504 1218 aa13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 DNM1Q05193 864 aaKnown RBP13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 TRIM29Q14134 588 aa13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 SEPT2Q15019 361 aa13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 SLC35G1Q2M3R5 365 aa13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 FOXD4L6Q3SYB3 417 aaPredicted RBP13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 FOXD4L3Q6VB84 417 aaPredicted RBP13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 SIAH1Q8IUQ4 282 aa13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 APOBEC3FQ8IUX4 373 aaKnown RBP13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 LRRC47Q8N1G4 583 aaKnown RBP13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 CABP5Q9NP86 173 aa13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 GJB4Q9NTQ9 266 aa13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 RBM27Q9P2N5 1060 aaKnown RBP13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 V9GY48 417 aaPredicted RBP13.02□□□□□ -0.33
NDUFA3-209ENST00000451517 USP17L5A8MUK1 530 aa13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 GRIN3BO60391 1043 aa13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 GH2P01242 217 aa13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 PDHBP11177 359 aa13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 EEF2P13639 858 aaKnown RBP13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 SMARCA1P28370 1054 aa13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 EPS15P42566 896 aa13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 HIRAP54198 1017 aaPredicted RBP13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 KIF23Q02241 960 aaPredicted RBP13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 ICA1Q05084 483 aa13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 GPR162Q16538 588 aa13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 ASPRV1Q53RT3 343 aa13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 RASGRP2Q7LDG7 609 aa13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 SPZ1Q9BXG8 430 aa13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 DEFB129Q9H1M3 183 aa13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 SYNPO2Q9UMS6 1093 aa13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 CNPY2Q9Y2B0 182 aa13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 ZC3H4Q9UPT8 1303 aaKnown RBP13.01□□□□□ -0.33
NDUFA3-209ENST00000451517 KLRF2D3W0D1 207 aa13□□□□□ -0.33
NDUFA3-209ENST00000451517 PRPF40AO75400 957 aaKnown RBP13□□□□□ -0.33
NDUFA3-209ENST00000451517 MMP1P03956 469 aa13□□□□□ -0.33
NDUFA3-209ENST00000451517 LMOD1P29536 600 aaPredicted RBP13□□□□□ -0.33
NDUFA3-209ENST00000451517 KRT85P78386 507 aa13□□□□□ -0.33
NDUFA3-209ENST00000451517 ZNF543Q08ER8 600 aa13□□□□□ -0.33
NDUFA3-209ENST00000451517 PFKFB3Q16875 520 aaPredicted RBP13□□□□□ -0.33
NDUFA3-209ENST00000451517 ANGEL2Q5VTE6 544 aaKnown RBP13□□□□□ -0.33
NDUFA3-209ENST00000451517 ATL3Q6DD88 541 aa13□□□□□ -0.33
NDUFA3-209ENST00000451517 FAM173BQ6P4H8 233 aa13□□□□□ -0.33
NDUFA3-209ENST00000451517 USP17L2Q6R6M4 530 aa13□□□□□ -0.33
NDUFA3-209ENST00000451517 BRAPQ7Z569 592 aa13□□□□□ -0.33
NDUFA3-209ENST00000451517 SHISA4Q96DD7 197 aa13□□□□□ -0.33
NDUFA3-209ENST00000451517 ADARB2Q9NS39 739 aaKnown RBP13□□□□□ -0.33
NDUFA3-209ENST00000451517 ZBTB21Q9ULJ3 1066 aa13□□□□□ -0.33
NDUFA3-209ENST00000451517 MTMR7Q9Y216 660 aa13□□□□□ -0.33
NDUFA3-209ENST00000451517 PITPNM2Q9BZ72 1349 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 hCG_1642624A0A1W2PR95 340 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 PHF20L1A8MW92 1017 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 KIF28PB7ZC32 967 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 CYTH3O43739 400 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 TRAK2O60296 914 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 GOLGA8HP0CJ92 632 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 SCG2P13521 617 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 U2AF2P26368 475 aaKnown RBP eCLIP12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 CAP2P40123 477 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 ATP2B2Q01814 1243 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 CSPP1Q1MSJ5 1256 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 SKOR2Q2VWA4 1001 aaPredicted RBP12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 MIGA2Q7L4E1 593 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 USP48Q86UV5 1035 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 GMCL1P1Q8NEA9 526 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 DCAF4Q8WV16 495 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 L3MBTL3Q96JM7 780 aaPredicted RBP12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 GDPD2Q9HCC8 539 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 GGA3Q9NZ52 723 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 SCAF8Q9UPN6 1271 aaKnown RBP12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 PPP2R3BQ9Y5P8 575 aa12.99□□□□□ -0.33
NDUFA3-209ENST00000451517 XBP1P17861 261 aa12.98□□□□□ -0.33
NDUFA3-209ENST00000451517 NCLP19338 710 aaKnown RBP12.98□□□□□ -0.33
NDUFA3-209ENST00000451517 SAFBQ15424 915 aaKnown RBP eCLIP12.98□□□□□ -0.33
NDUFA3-209ENST00000451517 GPATCH4Q5T3I0 446 aaKnown RBP12.98□□□□□ -0.33
NDUFA3-209ENST00000451517 FAM177A1Q8N128 213 aaPredicted RBP12.98□□□□□ -0.33
NDUFA3-209ENST00000451517 HOOK2Q96ED9 719 aa12.98□□□□□ -0.33
NDUFA3-209ENST00000451517 ZNF396Q96N95 335 aaPredicted RBP12.98□□□□□ -0.33
NDUFA3-209ENST00000451517 PHF20Q9BVI0 1012 aa12.98□□□□□ -0.33
NDUFA3-209ENST00000451517 SCAND2PQ9GZW5 306 aaPredicted RBP12.98□□□□□ -0.33
NDUFA3-209ENST00000451517 RIOX1Q9H6W3 641 aa12.98□□□□□ -0.33
NDUFA3-209ENST00000451517 SH3GLB2Q9NR46 395 aa12.98□□□□□ -0.33
NDUFA3-209ENST00000451517 GINM1Q9NU53 330 aa12.98□□□□□ -0.33
NDUFA3-209ENST00000451517 KCNJ14Q9UNX9 436 aa12.98□□□□□ -0.33
NDUFA3-209ENST00000451517 ELP1O95163 1332 aa12.97□□□□□ -0.33
NDUFA3-209ENST00000451517 FRMPD2Q68DX3 1309 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms