RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 RNF26Q9BY78 433 aaPredicted RBP9.57□□□□□ -0.88
NECAP1-202ENST00000450991 TMEM39BQ9GZU3 492 aa9.57□□□□□ -0.88
NECAP1-202ENST00000450991 COL2A1P02458 1487 aaPredicted RBP9.57□□□□□ -0.88
NECAP1-202ENST00000450991 NPM3O75607 178 aaKnown RBP9.57□□□□□ -0.88
NECAP1-202ENST00000450991 PLEKHA8P1O95397 391 aa9.57□□□□□ -0.88
NECAP1-202ENST00000450991 NOVP48745 357 aa9.57□□□□□ -0.88
NECAP1-202ENST00000450991 TMTC3Q6ZXV5 915 aa9.57□□□□□ -0.88
NECAP1-202ENST00000450991 BRAPQ7Z569 592 aa9.57□□□□□ -0.88
NECAP1-202ENST00000450991 SPATA32Q96LK8 384 aa9.57□□□□□ -0.88
NECAP1-202ENST00000450991 ARID3AQ99856 593 aa9.57□□□□□ -0.88
NECAP1-202ENST00000450991 KAT14Q9H8E8 782 aa9.57□□□□□ -0.88
NECAP1-202ENST00000450991 PI4KBQ9UBF8 816 aa9.57□□□□□ -0.88
NECAP1-202ENST00000450991 CFAP45Q9UL16 551 aa9.57□□□□□ -0.88
NECAP1-202ENST00000450991 SBF1O95248 1867 aa9.57□□□□□ -0.88
NECAP1-202ENST00000450991 CNTNAP5Q8WYK1 1306 aa9.57□□□□□ -0.88
NECAP1-202ENST00000450991 CNTNAP1P78357 1384 aa9.57□□□□□ -0.88
NECAP1-202ENST00000450991 ATAD5Q96QE3 1844 aa9.57□□□□□ -0.88
NECAP1-202ENST00000450991 hCG_1642624A0A1W2PR95 340 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 PRPF3O43395 683 aaKnown RBP9.56□□□□□ -0.88
NECAP1-202ENST00000450991 ENTPD3O75355 529 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 RPS12P25398 132 aaKnown RBP9.56□□□□□ -0.88
NECAP1-202ENST00000450991 ZNF280AP59817 542 aaPredicted RBP9.56□□□□□ -0.88
NECAP1-202ENST00000450991 ZBED3Q96IU2 234 aaPredicted RBP9.56□□□□□ -0.88
NECAP1-202ENST00000450991 ZNF396Q96N95 335 aaPredicted RBP9.56□□□□□ -0.88
NECAP1-202ENST00000450991 USP28Q96RU2 1077 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 TRIM34Q9BYJ4 488 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 DHX36Q9H2U1 1008 aaKnown RBP9.56□□□□□ -0.88
NECAP1-202ENST00000450991 RCOR1Q9UKL0 485 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 MYO1BO43795 1136 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 GDF11O95390 407 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 PKN1Q16512 942 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 GAS2L3Q86XJ1 694 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 MTMR14Q8NCE2 650 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 PNMA1Q8ND90 353 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 CTCFLQ8NI51 663 aaPredicted RBP9.56□□□□□ -0.88
NECAP1-202ENST00000450991 TRPM4Q8TD43 1214 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 PIBF1Q8WXW3 757 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 TMEM47Q9BQJ4 181 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 FTOQ9C0B1 505 aaKnown RBP eCLIP9.56□□□□□ -0.88
NECAP1-202ENST00000450991 EHD4Q9H223 541 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 SWAP70Q9UH65 585 aa9.56□□□□□ -0.88
NECAP1-202ENST00000450991 ISY1Q9ULR0 285 aaKnown RBP9.56□□□□□ -0.88
NECAP1-202ENST00000450991 DDNO94850 711 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-202ENST00000450991 U2AF2P26368 475 aaKnown RBP eCLIP9.55□□□□□ -0.883e-6■■■■□ 23.7
NECAP1-202ENST00000450991 ATP2B2Q01814 1243 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 GRM4Q14833 912 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 GPR162Q16538 588 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 MYSM1Q5VVJ2 828 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 C9orf131Q5VYM1 1079 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 MIGA2Q7L4E1 593 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 LRRC47Q8N1G4 583 aaKnown RBP9.55□□□□□ -0.88
NECAP1-202ENST00000450991 SRBD1Q8N5C6 995 aaKnown RBP9.55□□□□□ -0.88
NECAP1-202ENST00000450991 DPF2Q92785 391 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 SHISA4Q96DD7 197 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 PGBD1Q96JS3 809 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 IGKV6D-41A0A0C4DH26 115 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 GOLGA6L3A6NEY3 463 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 MMP1P03956 469 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 EPS15P42566 896 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 TRIM29Q14134 588 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 RRP1BQ14684 758 aaKnown RBP9.55□□□□□ -0.88
NECAP1-202ENST00000450991 KIF4BQ2VIQ3 1234 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 CERKLQ49MI3 558 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-202ENST00000450991 FAM151AQ8WW52 585 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 SYAP1Q96A49 352 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-202ENST00000450991 RTEL1Q9NZ71 1219 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 ATRNL1Q5VV63 1379 aa9.55□□□□□ -0.88
NECAP1-202ENST00000450991 GOLGA8HP0CJ92 632 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 KIF5BP33176 963 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 JAG1P78504 1218 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 RASA3Q14644 834 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 STAG2Q8N3U4 1231 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.54□□□□□ -0.88
NECAP1-202ENST00000450991 MTMR4Q9NYA4 1195 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 CLIP2Q9UDT6 1046 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 MAD2L2Q9UI95 211 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 H7C1D1 291 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 NASPP49321 788 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-202ENST00000450991 CEBPZQ03701 1054 aaKnown RBP9.54□□□□□ -0.88
NECAP1-202ENST00000450991 CCDC183Q5T5S1 534 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 FOXP4Q8IVH2 680 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-202ENST00000450991 GPC2Q8N158 579 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 CPVLQ9H3G5 476 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 POLR3EQ9NVU0 708 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 GPRC5DQ9NZD1 345 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 HACL1Q9UJ83 578 aa9.54□□□□□ -0.88
NECAP1-202ENST00000450991 V9GY48 417 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-202ENST00000450991 PALM3A6NDB9 673 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-202ENST00000450991 RAD21O60216 631 aa9.53□□□□□ -0.88
NECAP1-202ENST00000450991 TOP1P11387 765 aaKnown RBP9.53□□□□□ -0.88
NECAP1-202ENST00000450991 AKAP17AQ02040 695 aaKnown RBP9.53□□□□□ -0.88
NECAP1-202ENST00000450991 SEPT2Q15019 361 aa9.53□□□□□ -0.88
NECAP1-202ENST00000450991 PRAMEF18Q5VWM3 479 aa9.53□□□□□ -0.88
NECAP1-202ENST00000450991 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-202ENST00000450991 KCNJ14Q9UNX9 436 aa9.53□□□□□ -0.88
NECAP1-202ENST00000450991 CLIC4Q9Y696 253 aa9.53□□□□□ -0.88
NECAP1-202ENST00000450991 SYCE3A1L190 88 aa9.53□□□□□ -0.88
NECAP1-202ENST00000450991 YEATS4O95619 227 aa9.53□□□□□ -0.88
NECAP1-202ENST00000450991 GH2P01242 217 aa9.53□□□□□ -0.88
NECAP1-202ENST00000450991 LIG1P18858 919 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms