RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 RALYLQ86SE5 291 aaKnown RBP10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 SPDL1Q96EA4 605 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 KIF9Q9HAQ2 790 aa10.55□□□□□ -0.72
SYNPO2-204ENST00000448416 SEMA3EO15041 775 aa10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 CD44P16070 742 aaKnown RBP10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 HDGFP51858 240 aaKnown RBP10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 SLC8A3P57103 927 aa10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 USP31Q70CQ4 1352 aa10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 MLH3Q9UHC1 1453 aa10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 SSR1P43307 286 aaKnown RBP10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 AFMP43652 599 aa10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 ZMYM1Q5SVZ6 1142 aa10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 TICAM2Q86XR7 235 aa10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 SMYD4Q8IYR2 804 aaPredicted RBP10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 MMGT1Q8N4V1 131 aa10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 PPANQ9NQ55 473 aaKnown RBP10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 ANKRD18BA2A2Z9 1011 aa10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 COBLO75128 1261 aa10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 MDH1P40925 334 aaKnown RBP10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 KRT83P78385 493 aa10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 KRT31Q15323 416 aa10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 IMMTQ16891 758 aaKnown RBP10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 PHKBQ93100 1093 aa10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 PAG1Q9NWQ8 432 aa10.54□□□□□ -0.72
SYNPO2-204ENST00000448416 ATP2C2O75185 946 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 IPO7O95373 1038 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 ADCY2Q08462 1091 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 IFFO1Q0D2I5 559 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 RCSD1Q6JBY9 416 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 C6orf89Q6UWU4 347 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 OR8K1Q8NGG5 319 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 LGR6Q9HBX8 967 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 TAB2Q9NYJ8 693 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 RIPOR2Q9Y4F9 1068 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 EME2A4GXA9 379 aaPredicted RBP10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 CDKL5O76039 1030 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 HERVK_113P62684 666 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 CUL4BQ13620 913 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 TBC1D31Q96DN5 1066 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 CCDC43Q96MW1 224 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 NEUROD6Q96NK8 337 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 MAST3O60307 1309 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 BTBD11A6QL63 1104 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 DDX58O95786 925 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 RXRAP19793 462 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 PPARAQ07869 468 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 ANKARQ7Z5J8 1434 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 ANO9A1A5B4 782 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 DNM1LO00429 736 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 ACTN4O43707 911 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 PTPREP23469 700 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 METAP2P50579 478 aaKnown RBP eCLIP10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 COPB1P53618 953 aaKnown RBP10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 EPHA10Q5JZY3 1008 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 NCOA7Q8NI08 942 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 RUBCNQ92622 972 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 CYFIP2Q96F07 1278 aa10.53□□□□□ -0.72
SYNPO2-204ENST00000448416 UTYO14607 1347 aa10.52□□□□□ -0.72
SYNPO2-204ENST00000448416 MAP3K15Q6ZN16 1313 aa10.52□□□□□ -0.72
SYNPO2-204ENST00000448416 MACROD2A1Z1Q3 448 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 VAV2P52735 878 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 RASSF8Q8NHQ8 419 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 SPATA20Q8TB22 786 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 SAAL1Q96ER3 474 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 COPRSQ9NQ92 184 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 BATF3Q9NR55 127 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 ETAA1Q9NY74 926 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 BAIAP2L1Q9UHR4 511 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 FBXO2Q9UK22 296 aaPredicted RBP10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 CTNND2Q9UQB3 1225 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 LUC7L2Q9Y383 392 aaKnown RBP10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 OVOS2A0A0G2JMS6 1433 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 CASP1P29466 404 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 UBXN1Q04323 297 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 MAB21L3Q8N8X9 362 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 SPATA4Q8NEY3 305 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 CAVIN3Q969G5 261 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 HOOK2Q96ED9 719 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 OSBPL7Q9BZF2 842 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 STIM2Q9P246 746 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 PES1O00541 588 aaKnown RBP10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 OPLAHO14841 1288 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 BUB1BO60566 1050 aaPredicted RBP10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 TTF1Q15361 905 aaPredicted RBP10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 USP49Q70CQ1 688 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 RIC3Q7Z5B4 369 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 TATDN2Q93075 761 aa10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 CPSF2Q9P2I0 782 aaKnown RBP10.52□□□□□ -0.73
SYNPO2-204ENST00000448416 TTC26A0AVF1 554 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 MPHOSPH10O00566 681 aaKnown RBP10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 HPDP32754 393 aaPredicted RBP10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 IARSP41252 1262 aaKnown RBP10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 PPARDQ03181 441 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 SPAG1Q07617 926 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 SEMA3FQ13275 785 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 ACCSLQ4AC99 568 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 CCDC181Q5TID7 509 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 MB21D2Q8IYB1 491 aaPredicted RBP10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 USHBP1Q8N6Y0 703 aa10.51□□□□□ -0.73
SYNPO2-204ENST00000448416 LMBR1Q8WVP7 490 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms