RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 IFNL3Q8IZI9 196 aa22.52■■□□□ 1.2
COMMD1-204ENST00000445644 RABGAP1Q9Y3P9 1069 aa22.52■■□□□ 1.2
COMMD1-204ENST00000445644 PATL2C9JE40 543 aaKnown RBP22.51■■□□□ 1.19
COMMD1-204ENST00000445644 EEF2P13639 858 aaKnown RBP22.51■■□□□ 1.19
COMMD1-204ENST00000445644 GNAT2P19087 354 aa22.51■■□□□ 1.19
COMMD1-204ENST00000445644 TRIM32Q13049 653 aa22.51■■□□□ 1.19
COMMD1-204ENST00000445644 B4GALNT3Q6L9W6 998 aa22.51■■□□□ 1.19
COMMD1-204ENST00000445644 CCDC129Q6ZRS4 1044 aa22.51■■□□□ 1.19
COMMD1-204ENST00000445644 RNF208Q9H0X6 261 aa22.51■■□□□ 1.19
COMMD1-204ENST00000445644 ARHGEF10LQ9HCE6 1279 aa22.51■■□□□ 1.19
COMMD1-204ENST00000445644 ZNF236Q9UL36 1845 aa22.5■■□□□ 1.19
COMMD1-204ENST00000445644 GJB1P08034 283 aa22.5■■□□□ 1.19
COMMD1-204ENST00000445644 GJA8P48165 433 aa22.5■■□□□ 1.19
COMMD1-204ENST00000445644 TDO2P48775 406 aa22.5■■□□□ 1.19
COMMD1-204ENST00000445644 LRRFIP1Q32MZ4 808 aaKnown RBP22.5■■□□□ 1.19
COMMD1-204ENST00000445644 GPR142Q7Z601 462 aa22.5■■□□□ 1.19
COMMD1-204ENST00000445644 USP6NLQ92738 828 aa22.5■■□□□ 1.19
COMMD1-204ENST00000445644 VCPKMTQ9H867 229 aa22.5■■□□□ 1.19
COMMD1-204ENST00000445644 ZBTB47Q9UFB7 747 aaPredicted RBP22.5■■□□□ 1.19
COMMD1-204ENST00000445644 FRMPD3Q5JV73 1810 aa22.5■■□□□ 1.19
COMMD1-204ENST00000445644 MAPK4P31152 587 aa22.49■■□□□ 1.19
COMMD1-204ENST00000445644 MORN1Q5T089 497 aa22.49■■□□□ 1.19
COMMD1-204ENST00000445644 SPICE1Q8N0Z3 855 aa22.49■■□□□ 1.19
COMMD1-204ENST00000445644 TRIB2Q92519 343 aa22.49■■□□□ 1.19
COMMD1-204ENST00000445644 EVI5LQ96CN4 794 aa22.49■■□□□ 1.19
COMMD1-204ENST00000445644 RWDD1Q9H446 243 aaPredicted RBP22.49■■□□□ 1.19
COMMD1-204ENST00000445644 APPP05067 770 aa22.48■■□□□ 1.19
COMMD1-204ENST00000445644 CYP2B6P20813 491 aa22.48■■□□□ 1.19
COMMD1-204ENST00000445644 PRPF38BQ5VTL8 546 aaKnown RBP22.48■■□□□ 1.19
COMMD1-204ENST00000445644 LPAR1Q92633 364 aa22.48■■□□□ 1.19
COMMD1-204ENST00000445644 TANGO6Q9C0B7 1094 aa22.48■■□□□ 1.19
COMMD1-204ENST00000445644 KANSL2Q9H9L4 492 aa22.48■■□□□ 1.19
COMMD1-204ENST00000445644 PAK6Q9NQU5 681 aaPredicted RBP22.48■■□□□ 1.19
COMMD1-204ENST00000445644 IGKV6D-41A0A0C4DH26 115 aa22.47■■□□□ 1.19
COMMD1-204ENST00000445644 HMGCRP04035 888 aa22.47■■□□□ 1.19
COMMD1-204ENST00000445644 COG2Q14746 738 aa22.47■■□□□ 1.19
COMMD1-204ENST00000445644 PLEKHH3Q7Z736 793 aa22.47■■□□□ 1.19
COMMD1-204ENST00000445644 UBE2Q1Q7Z7E8 422 aa22.47■■□□□ 1.19
COMMD1-204ENST00000445644 CHD1LQ86WJ1 897 aa22.47■■□□□ 1.19
COMMD1-204ENST00000445644 U2AF1L4Q8WU68 220 aaKnown RBP22.47■■□□□ 1.19
COMMD1-204ENST00000445644 NUDT12Q9BQG2 462 aa22.47■■□□□ 1.19
COMMD1-204ENST00000445644 PRDM1O75626 825 aa22.46■■□□□ 1.19
COMMD1-204ENST00000445644 NUCB1Q02818 461 aa22.46■■□□□ 1.19
COMMD1-204ENST00000445644 VPS53Q5VIR6 699 aa22.46■■□□□ 1.19
COMMD1-204ENST00000445644 SOCS4Q8WXH5 440 aa22.46■■□□□ 1.19
COMMD1-204ENST00000445644 SH2D4AQ9H788 454 aa22.46■■□□□ 1.19
COMMD1-204ENST00000445644 MKNK2Q9HBH9 465 aa22.46■■□□□ 1.19
COMMD1-204ENST00000445644 ALPK3Q96L96 1907 aa22.46■■□□□ 1.19
COMMD1-204ENST00000445644 ZNFX1Q9P2E3 1918 aaKnown RBP22.45■■□□□ 1.18
COMMD1-204ENST00000445644 WDR46O15213 610 aaKnown RBP22.45■■□□□ 1.18
COMMD1-204ENST00000445644 SGPL1O95470 568 aa22.45■■□□□ 1.18
COMMD1-204ENST00000445644 DSG3P32926 999 aa22.45■■□□□ 1.18
COMMD1-204ENST00000445644 ATP2B2Q01814 1243 aa22.45■■□□□ 1.18
COMMD1-204ENST00000445644 CCL14Q16627 93 aa22.45■■□□□ 1.18
COMMD1-204ENST00000445644 PLEKHM2Q8IWE5 1019 aa22.45■■□□□ 1.18
COMMD1-204ENST00000445644 FAM227BQ96M60 508 aa22.45■■□□□ 1.18
COMMD1-204ENST00000445644 TACC3Q9Y6A5 838 aa22.45■■□□□ 1.18
COMMD1-204ENST00000445644 A0A0D9SFI3 127 aa22.44■■□□□ 1.18
COMMD1-204ENST00000445644 XRCC5P13010 732 aaKnown RBP22.44■■□□□ 1.18
COMMD1-204ENST00000445644 NKX2-3Q8TAU0 364 aa22.44■■□□□ 1.18
COMMD1-204ENST00000445644 ATG4CQ96DT6 458 aa22.44■■□□□ 1.18
COMMD1-204ENST00000445644 DEFB118Q96PH6 123 aa22.44■■□□□ 1.18
COMMD1-204ENST00000445644 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.44■■□□□ 1.18
COMMD1-204ENST00000445644 NAPBQ9H115 298 aa22.44■■□□□ 1.18
COMMD1-204ENST00000445644 FBXO28Q9NVF7 368 aa22.44■■□□□ 1.18
COMMD1-204ENST00000445644 PLIN4Q96Q06 1357 aa22.43■■□□□ 1.18
COMMD1-204ENST00000445644 FLOT1O75955 427 aa22.43■■□□□ 1.18
COMMD1-204ENST00000445644 PTPREP23469 700 aa22.43■■□□□ 1.18
COMMD1-204ENST00000445644 CCNA1P78396 465 aa22.43■■□□□ 1.18
COMMD1-204ENST00000445644 IRX6P78412 446 aaPredicted RBP22.43■■□□□ 1.18
COMMD1-204ENST00000445644 PPARAQ07869 468 aa22.43■■□□□ 1.18
COMMD1-204ENST00000445644 MAP3K21Q5TCX8 1036 aa22.43■■□□□ 1.18
COMMD1-204ENST00000445644 MOV10L1Q9BXT6 1211 aaKnown RBP22.43■■□□□ 1.18
COMMD1-204ENST00000445644 NACAP1Q9BZK3 213 aa22.43■■□□□ 1.18
COMMD1-204ENST00000445644 OSBPL3Q9H4L5 887 aa22.43■■□□□ 1.18
COMMD1-204ENST00000445644 HOXC10Q9NYD6 342 aa22.43■■□□□ 1.18
COMMD1-204ENST00000445644 NYAP2Q9P242 653 aa22.43■■□□□ 1.18
COMMD1-204ENST00000445644 LAMA4Q16363 1823 aa22.43■■□□□ 1.18
COMMD1-204ENST00000445644 RGS2P41220 211 aa22.42■■□□□ 1.18
COMMD1-204ENST00000445644 MAP2K5Q13163 448 aa22.42■■□□□ 1.18
COMMD1-204ENST00000445644 GRB14Q14449 540 aa22.42■■□□□ 1.18
COMMD1-204ENST00000445644 CCAR1Q8IX12 1150 aaKnown RBP22.42■■□□□ 1.18
COMMD1-204ENST00000445644 SPATC1LQ9H0A9 340 aa22.42■■□□□ 1.18
COMMD1-204ENST00000445644 CRISPLD2Q9H0B8 497 aa22.42■■□□□ 1.18
COMMD1-204ENST00000445644 HELLSQ9NRZ9 838 aa22.42■■□□□ 1.18
COMMD1-204ENST00000445644 FLRT1Q9NZU1 646 aa22.42■■□□□ 1.18
COMMD1-204ENST00000445644 PLXNA1Q9UIW2 1896 aa22.41■■□□□ 1.18
COMMD1-204ENST00000445644 RPTORQ8N122 1335 aa22.41■■□□□ 1.18
COMMD1-204ENST00000445644 NMIQ13287 307 aaPredicted RBP22.41■■□□□ 1.18
COMMD1-204ENST00000445644 FAM83BQ5T0W9 1011 aa22.41■■□□□ 1.18
COMMD1-204ENST00000445644 ZNF589Q86UQ0 364 aaPredicted RBP22.41■■□□□ 1.18
COMMD1-204ENST00000445644 CEP95Q96GE4 821 aa22.41■■□□□ 1.18
COMMD1-204ENST00000445644 NUP88Q99567 741 aaPredicted RBP22.41■■□□□ 1.18
COMMD1-204ENST00000445644 APBA2Q99767 749 aa22.41■■□□□ 1.18
COMMD1-204ENST00000445644 GOPCQ9HD26 462 aa22.41■■□□□ 1.18
COMMD1-204ENST00000445644 INCENPQ9NQS7 918 aa22.41■■□□□ 1.18
COMMD1-204ENST00000445644 ADAMTS5Q9UNA0 930 aa22.41■■□□□ 1.18
COMMD1-204ENST00000445644 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.41■■□□□ 1.18
COMMD1-204ENST00000445644 SLC15A5A6NIM6 579 aa22.4■■□□□ 1.18
COMMD1-204ENST00000445644 CTDSPL2Q05D32 466 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms