RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 COG7P83436 770 aa20.6■□□□□ 0.89
SHANK3-203ENST00000445220 NAP1L4Q99733 375 aaKnown RBP20.6■□□□□ 0.89
SHANK3-203ENST00000445220 SUDS3Q9H7L9 328 aaPredicted RBP20.6■□□□□ 0.89
SHANK3-203ENST00000445220 CTTNBP2NLQ9P2B4 639 aa20.6■□□□□ 0.89
SHANK3-203ENST00000445220 ADGBQ8N7X0 1667 aa20.6■□□□□ 0.89
SHANK3-203ENST00000445220 RBM6P78332 1123 aaKnown RBP20.6■□□□□ 0.89
SHANK3-203ENST00000445220 KRT40Q6A162 431 aa20.6■□□□□ 0.89
SHANK3-203ENST00000445220 TYW1BQ6NUM6 668 aa20.6■□□□□ 0.89
SHANK3-203ENST00000445220 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.6■□□□□ 0.89
SHANK3-203ENST00000445220 SH3TC1Q8TE82 1336 aa20.6■□□□□ 0.89
SHANK3-203ENST00000445220 LGSNQ5TDP6 509 aa20.6■□□□□ 0.89
SHANK3-203ENST00000445220 HELBQ8NG08 1087 aaPredicted RBP20.6■□□□□ 0.89
SHANK3-203ENST00000445220 MAK16Q9BXY0 300 aaKnown RBP20.6■□□□□ 0.89
SHANK3-203ENST00000445220 ERCC3P19447 782 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 ME3Q16798 604 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 TTC38Q5R3I4 469 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 JPH2Q9BR39 696 aaPredicted RBP20.59■□□□□ 0.89
SHANK3-203ENST00000445220 ZKSCAN3Q9BRR0 538 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 VCX3AQ9NNX9 186 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 ZNF335Q9H4Z2 1342 aaPredicted RBP20.59■□□□□ 0.89
SHANK3-203ENST00000445220 GSDMBQ8TAX9 411 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 SLC52A2Q9HAB3 445 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 BTG4Q9NY30 223 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 CHD1O14646 1710 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 PFKFB1P16118 471 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 NRBP1Q9UHY1 535 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 CLCN6P51797 869 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 CCDC197Q8NCU1 140 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 APPBP2Q92624 585 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 FAM227BQ96M60 508 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 TSPYL2Q9H2G4 693 aaPredicted RBP20.59■□□□□ 0.89
SHANK3-203ENST00000445220 Q9H521 79 aa20.59■□□□□ 0.89
SHANK3-203ENST00000445220 MYO1CO00159 1063 aa20.58■□□□□ 0.89
SHANK3-203ENST00000445220 E2F5Q15329 346 aa20.58■□□□□ 0.89
SHANK3-203ENST00000445220 MYSM1Q5VVJ2 828 aa20.58■□□□□ 0.89
SHANK3-203ENST00000445220 MIER3Q7Z3K6 550 aa20.58■□□□□ 0.89
SHANK3-203ENST00000445220 MIGA1Q8NAN2 632 aa20.58■□□□□ 0.89
SHANK3-203ENST00000445220 EYA3Q99504 573 aa20.58■□□□□ 0.89
SHANK3-203ENST00000445220 MAGEA9P43362 315 aa20.58■□□□□ 0.89
SHANK3-203ENST00000445220 PUM3Q15397 648 aaKnown RBP20.58■□□□□ 0.89
SHANK3-203ENST00000445220 LETM2Q2VYF4 491 aa20.58■□□□□ 0.89
SHANK3-203ENST00000445220 FAF1Q9UNN5 650 aaPredicted RBP20.58■□□□□ 0.89
SHANK3-203ENST00000445220 USP19O94966 1318 aa20.58■□□□□ 0.89
SHANK3-203ENST00000445220 MMS22LQ6ZRQ5 1243 aa20.58■□□□□ 0.89
SHANK3-203ENST00000445220 TRPC5Q9UL62 973 aaPredicted RBP20.58■□□□□ 0.89
SHANK3-203ENST00000445220 AGTPBP1Q9UPW5 1226 aa20.58■□□□□ 0.89
SHANK3-203ENST00000445220 SPDYE3A6NKU9 549 aa20.58■□□□□ 0.88
SHANK3-203ENST00000445220 DIXDC1Q155Q3 683 aa20.58■□□□□ 0.88
SHANK3-203ENST00000445220 EPSTI1Q96J88 318 aa20.58■□□□□ 0.88
SHANK3-203ENST00000445220 MBD4O95243 580 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 C2CD5Q86YS7 1000 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 MAIP1Q8WWC4 291 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 PDE8AO60658 829 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 HSP90AA5PQ58FG0 334 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 RRAGAQ7L523 313 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 P3H4Q92791 437 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 ANTXR1Q9H6X2 564 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 B4E1Z4 1266 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 GAS8O95995 478 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 ITIH3Q06033 890 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 PIK3AP1Q6ZUJ8 805 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 TTC6Q86TZ1 520 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 PLEKHA4Q9H4M7 779 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 PICALMQ13492 652 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 RASEFQ8IZ41 740 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 CACTINQ8WUQ7 758 aaKnown RBP20.57■□□□□ 0.88
SHANK3-203ENST00000445220 N4BP2L2Q92802 583 aaPredicted RBP20.57■□□□□ 0.88
SHANK3-203ENST00000445220 TRIML1Q8N9V2 468 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 MYO1AQ9UBC5 1043 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 SERTAD1Q9UHV2 236 aa20.57■□□□□ 0.88
SHANK3-203ENST00000445220 CCDC169A6NNP5 214 aa20.56■□□□□ 0.88
SHANK3-203ENST00000445220 SUN1O94901 812 aa20.56■□□□□ 0.88
SHANK3-203ENST00000445220 IRX5P78411 483 aaPredicted RBP20.56■□□□□ 0.88
SHANK3-203ENST00000445220 SPTLC3Q9NUV7 552 aa20.56■□□□□ 0.88
SHANK3-203ENST00000445220 NSFL1CQ9UNZ2 370 aaKnown RBP20.56■□□□□ 0.88
SHANK3-203ENST00000445220 TACC3Q9Y6A5 838 aa20.56■□□□□ 0.88
SHANK3-203ENST00000445220 CALUO43852 315 aaPredicted RBP20.56■□□□□ 0.88
SHANK3-203ENST00000445220 LIN9Q5TKA1 542 aa20.56■□□□□ 0.88
SHANK3-203ENST00000445220 TTC19Q6DKK2 380 aaPredicted RBP20.56■□□□□ 0.88
SHANK3-203ENST00000445220 DBNDD2Q9BQY9 259 aa20.56■□□□□ 0.88
SHANK3-203ENST00000445220 ACTR5Q9H9F9 607 aaPredicted RBP20.56■□□□□ 0.88
SHANK3-203ENST00000445220 AMFRQ9UKV5 643 aa20.56■□□□□ 0.88
SHANK3-203ENST00000445220 ITGA6P23229 1130 aa20.56■□□□□ 0.88
SHANK3-203ENST00000445220 KBTBD3Q8NAB2 608 aa20.56■□□□□ 0.88
SHANK3-203ENST00000445220 SESN3P58005 492 aa20.56■□□□□ 0.88
SHANK3-203ENST00000445220 PPP1R21Q6ZMI0 780 aa20.56■□□□□ 0.88
SHANK3-203ENST00000445220 ZBTB17Q13105 803 aa20.55■□□□□ 0.88
SHANK3-203ENST00000445220 RILPQ96NA2 401 aa20.55■□□□□ 0.88
SHANK3-203ENST00000445220 USP28Q96RU2 1077 aa20.55■□□□□ 0.88
SHANK3-203ENST00000445220 FAM207AQ9NSI2 230 aaPredicted RBP20.55■□□□□ 0.88
SHANK3-203ENST00000445220 F8W031 263 aaPredicted RBP20.55■□□□□ 0.88
SHANK3-203ENST00000445220 ARMC9Q7Z3E5 817 aa20.55■□□□□ 0.88
SHANK3-203ENST00000445220 FANCLQ9NW38 375 aa20.55■□□□□ 0.88
SHANK3-203ENST00000445220 PPP1R9AQ9ULJ8 1098 aa20.55■□□□□ 0.88
SHANK3-203ENST00000445220 KRIT1O00522 736 aa20.55■□□□□ 0.88
SHANK3-203ENST00000445220 TIMM10P62072 90 aa20.55■□□□□ 0.88
SHANK3-203ENST00000445220 KCTD16Q68DU8 428 aa20.55■□□□□ 0.88
SHANK3-203ENST00000445220 FAM89AQ96GI7 184 aa20.55■□□□□ 0.88
SHANK3-203ENST00000445220 RGS12O14924 1447 aa20.55■□□□□ 0.88
SHANK3-203ENST00000445220 KCNJ18B7U540 433 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms