RNA–Protein interactions for RNA: ENST00000444523.1

CCDC117-204, Transcript of coiled-coil domain containing 117, humanhuman

TSL 4

Gene CCDC117, Length 463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-204ENST00000444523 MAP2K5Q13163 448 aa29.29■■■□□ 2.28
CCDC117-204ENST00000444523 C12orf60Q5U649 245 aa29.29■■■□□ 2.28
CCDC117-204ENST00000444523 PUS7LQ9H0K6 701 aaKnown RBP29.29■■■□□ 2.28
CCDC117-204ENST00000444523 EVI5O60447 810 aa29.28■■■□□ 2.28
CCDC117-204ENST00000444523 LHX8Q68G74 356 aa29.28■■■□□ 2.28
CCDC117-204ENST00000444523 APBA2Q99767 749 aa29.28■■■□□ 2.28
CCDC117-204ENST00000444523 SWAP70Q9UH65 585 aa29.28■■■□□ 2.28
CCDC117-204ENST00000444523 USP17L12C9JPN9 530 aa29.27■■■□□ 2.28
CCDC117-204ENST00000444523 USP17L21D6R901 530 aa29.27■■■□□ 2.28
CCDC117-204ENST00000444523 PTPREP23469 700 aa29.27■■■□□ 2.28
CCDC117-204ENST00000444523 TMEM179Q6ZVK1 233 aa29.27■■■□□ 2.28
CCDC117-204ENST00000444523 CCAR1Q8IX12 1150 aaKnown RBP29.27■■■□□ 2.28
CCDC117-204ENST00000444523 TRMT44Q8IYL2 757 aaKnown RBP29.27■■■□□ 2.28
CCDC117-204ENST00000444523 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.27■■■□□ 2.28
CCDC117-204ENST00000444523 CDK8P49336 464 aa29.26■■■□□ 2.27
CCDC117-204ENST00000444523 IRX6P78412 446 aaPredicted RBP29.26■■■□□ 2.27
CCDC117-204ENST00000444523 DCTPP1Q9H773 170 aa29.26■■■□□ 2.27
CCDC117-204ENST00000444523 SLC15A5A6NIM6 579 aa29.25■■■□□ 2.27
CCDC117-204ENST00000444523 IGHA2P01877 340 aa29.25■■■□□ 2.27
CCDC117-204ENST00000444523 CCNA1P78396 465 aa29.25■■■□□ 2.27
CCDC117-204ENST00000444523 GRB14Q14449 540 aa29.25■■■□□ 2.27
CCDC117-204ENST00000444523 NPLOC4Q8TAT6 608 aa29.25■■■□□ 2.27
CCDC117-204ENST00000444523 PFASO15067 1338 aa29.24■■■□□ 2.27
CCDC117-204ENST00000444523 GREB1LQ9C091 1923 aaPredicted RBP29.24■■■□□ 2.27
CCDC117-204ENST00000444523 COG2Q14746 738 aa29.24■■■□□ 2.27
CCDC117-204ENST00000444523 CTR9Q6PD62 1173 aa29.24■■■□□ 2.27
CCDC117-204ENST00000444523 C16orf86Q6ZW13 317 aa29.24■■■□□ 2.27
CCDC117-204ENST00000444523 NBPF3Q9H094 633 aa29.24■■■□□ 2.27
CCDC117-204ENST00000444523 SLC4A4Q9Y6R1 1079 aa29.24■■■□□ 2.27
CCDC117-204ENST00000444523 COL11A1P12107 1806 aaPredicted RBP29.23■■■□□ 2.27
CCDC117-204ENST00000444523 HOXC6P09630 235 aa29.23■■■□□ 2.27
CCDC117-204ENST00000444523 TSHZ3Q63HK5 1081 aa29.23■■■□□ 2.27
CCDC117-204ENST00000444523 MOV10L1Q9BXT6 1211 aaKnown RBP29.23■■■□□ 2.27
CCDC117-204ENST00000444523 C11orf49Q9H6J7 331 aa29.23■■■□□ 2.27
CCDC117-204ENST00000444523 ECHDC1Q9NTX5 307 aa29.23■■■□□ 2.27
CCDC117-204ENST00000444523 TMX2Q9Y320 296 aa29.23■■■□□ 2.27
CCDC117-204ENST00000444523 ZNFX1Q9P2E3 1918 aaKnown RBP29.23■■■□□ 2.27
CCDC117-204ENST00000444523 ZNF236Q9UL36 1845 aa29.22■■■□□ 2.27
CCDC117-204ENST00000444523 WDR78Q5VTH9 848 aa29.22■■■□□ 2.27
CCDC117-204ENST00000444523 COL6A1P12109 1028 aa29.21■■■□□ 2.27
CCDC117-204ENST00000444523 DSG3P32926 999 aa29.21■■■□□ 2.27
CCDC117-204ENST00000444523 ICA1Q05084 483 aa29.21■■■□□ 2.27
CCDC117-204ENST00000444523 C7orf61Q8IZ16 206 aa29.21■■■□□ 2.27
CCDC117-204ENST00000444523 STRBPQ96SI9 672 aaKnown RBP29.21■■■□□ 2.27
CCDC117-204ENST00000444523 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.21■■■□□ 2.27
CCDC117-204ENST00000444523 TANGO6Q9C0B7 1094 aa29.21■■■□□ 2.27
CCDC117-204ENST00000444523 STAP2Q9UGK3 403 aa29.21■■■□□ 2.27
CCDC117-204ENST00000444523 SPICE1Q8N0Z3 855 aa29.2■■■□□ 2.26
CCDC117-204ENST00000444523 TRPV1Q8NER1 839 aa29.2■■■□□ 2.26
CCDC117-204ENST00000444523 EXOC6Q8TAG9 804 aa29.2■■■□□ 2.26
CCDC117-204ENST00000444523 CCDC17Q96LX7 622 aa29.2■■■□□ 2.26
CCDC117-204ENST00000444523 VCPKMTQ9H867 229 aa29.2■■■□□ 2.26
CCDC117-204ENST00000444523 CWC22Q9HCG8 908 aaKnown RBP29.2■■■□□ 2.26
CCDC117-204ENST00000444523 HOXC10Q9NYD6 342 aa29.2■■■□□ 2.26
CCDC117-204ENST00000444523 GLRX3O76003 335 aaKnown RBP29.19■■■□□ 2.26
CCDC117-204ENST00000444523 OSBP2Q969R2 916 aa29.19■■■□□ 2.26
CCDC117-204ENST00000444523 ATG4CQ96DT6 458 aa29.19■■■□□ 2.26
CCDC117-204ENST00000444523 SPATC1LQ9H0A9 340 aa29.19■■■□□ 2.26
CCDC117-204ENST00000444523 ZSCAN25Q6NSZ9 544 aa29.18■■■□□ 2.26
CCDC117-204ENST00000444523 KBTBD3Q8NAB2 608 aa29.18■■■□□ 2.26
CCDC117-204ENST00000444523 LPAR1Q92633 364 aa29.18■■■□□ 2.26
CCDC117-204ENST00000444523 ARHGEF10LQ9HCE6 1279 aa29.18■■■□□ 2.26
CCDC117-204ENST00000444523 ZMYND8Q9ULU4 1186 aaPredicted RBP29.18■■■□□ 2.26
CCDC117-204ENST00000444523 PCDHB15Q9Y5E8 787 aa29.18■■■□□ 2.26
CCDC117-204ENST00000444523 GSG1L2A8MUP6 293 aa29.17■■■□□ 2.26
CCDC117-204ENST00000444523 EEF2P13639 858 aaKnown RBP29.17■■■□□ 2.26
CCDC117-204ENST00000444523 GDF15Q99988 308 aa29.17■■■□□ 2.26
CCDC117-204ENST00000444523 COBLO75128 1261 aa29.16■■■□□ 2.26
CCDC117-204ENST00000444523 ERCC3P19447 782 aa29.16■■■□□ 2.26
CCDC117-204ENST00000444523 CYP2C19P33261 490 aa29.16■■■□□ 2.26
CCDC117-204ENST00000444523 MFSD14CQ5VZR4 134 aa29.16■■■□□ 2.26
CCDC117-204ENST00000444523 SHCBP1Q8NEM2 672 aa29.16■■■□□ 2.26
CCDC117-204ENST00000444523 IVNS1ABPQ9Y6Y0 642 aa29.16■■■□□ 2.26
CCDC117-204ENST00000444523 DNAH12Q6ZR08 3092 aa29.16■■■□□ 2.26
CCDC117-204ENST00000444523 LAMA3Q16787 3333 aa29.15■■■□□ 2.26
CCDC117-204ENST00000444523 SOX1O00570 391 aaPredicted RBP29.15■■■□□ 2.26
CCDC117-204ENST00000444523 ADORA2AP29274 412 aa29.15■■■□□ 2.26
CCDC117-204ENST00000444523 FBXO28Q9NVF7 368 aa29.15■■■□□ 2.26
CCDC117-204ENST00000444523 ADAMTS5Q9UNA0 930 aa29.15■■■□□ 2.26
CCDC117-204ENST00000444523 WDR46O15213 610 aaKnown RBP29.14■■■□□ 2.26
CCDC117-204ENST00000444523 FLOT1O75955 427 aa29.14■■■□□ 2.26
CCDC117-204ENST00000444523 ATP2B2Q01814 1243 aa29.14■■■□□ 2.26
CCDC117-204ENST00000444523 SBK1Q52WX2 424 aa29.14■■■□□ 2.26
CCDC117-204ENST00000444523 OTUD7AQ8TE49 926 aaPredicted RBP29.14■■■□□ 2.26
CCDC117-204ENST00000444523 EPB41L4AQ9HCS5 686 aaPredicted RBP29.14■■■□□ 2.26
CCDC117-204ENST00000444523 CYBAP13498 195 aa29.13■■■□□ 2.25
CCDC117-204ENST00000444523 SYN1P17600 705 aa29.13■■■□□ 2.25
CCDC117-204ENST00000444523 RASA1P20936 1047 aa29.13■■■□□ 2.25
CCDC117-204ENST00000444523 TMEM132BQ14DG7 1078 aa29.13■■■□□ 2.25
CCDC117-204ENST00000444523 LRRC26Q2I0M4 334 aa29.13■■■□□ 2.25
CCDC117-204ENST00000444523 MB21D1Q8N884 522 aa29.13■■■□□ 2.25
CCDC117-204ENST00000444523 APPBP2Q92624 585 aa29.13■■■□□ 2.25
CCDC117-204ENST00000444523 KANSL2Q9H9L4 492 aa29.13■■■□□ 2.25
CCDC117-204ENST00000444523 ARPP21Q9UBL0 812 aaPredicted RBP29.13■■■□□ 2.25
CCDC117-204ENST00000444523 SMCHD1A6NHR9 2005 aa29.12■■■□□ 2.25
CCDC117-204ENST00000444523 M0R2C6 588 aa29.12■■■□□ 2.25
CCDC117-204ENST00000444523 RNF113AO15541 343 aaKnown RBP29.12■■■□□ 2.25
CCDC117-204ENST00000444523 AAMPQ13685 434 aa29.12■■■□□ 2.25
CCDC117-204ENST00000444523 AMOTL1Q8IY63 956 aa29.12■■■□□ 2.25
CCDC117-204ENST00000444523 SH2D4AQ9H788 454 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms