RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 RASA1P20936 1047 aa24.8■■□□□ 1.56
VIL1-204ENST00000440053 TRIM32Q13049 653 aa24.8■■□□□ 1.56
VIL1-204ENST00000440053 SHISA4Q96DD7 197 aa24.8■■□□□ 1.56
VIL1-204ENST00000440053 MKNK2Q9HBH9 465 aa24.8■■□□□ 1.56
VIL1-204ENST00000440053 ARHGEF10LQ9HCE6 1279 aa24.8■■□□□ 1.56
VIL1-204ENST00000440053 RABGAP1Q9Y3P9 1069 aa24.8■■□□□ 1.56
VIL1-204ENST00000440053 PRDM1O75626 825 aa24.79■■□□□ 1.56
VIL1-204ENST00000440053 TANGO6Q9C0B7 1094 aa24.79■■□□□ 1.56
VIL1-204ENST00000440053 GPR142Q7Z601 462 aa24.78■■□□□ 1.56
VIL1-204ENST00000440053 CCAR1Q8IX12 1150 aaKnown RBP24.78■■□□□ 1.56
VIL1-204ENST00000440053 GTF3C2Q8WUA4 911 aaPredicted RBP24.78■■□□□ 1.56
VIL1-204ENST00000440053 EVI5LQ96CN4 794 aa24.78■■□□□ 1.56
VIL1-204ENST00000440053 RBBP6Q7Z6E9 1792 aaKnown RBP24.78■■□□□ 1.56
VIL1-204ENST00000440053 FOXP2O15409 715 aa24.77■■□□□ 1.56
VIL1-204ENST00000440053 GJB1P08034 283 aa24.77■■□□□ 1.56
VIL1-204ENST00000440053 MAPK4P31152 587 aa24.77■■□□□ 1.56
VIL1-204ENST00000440053 COG2Q14746 738 aa24.77■■□□□ 1.56
VIL1-204ENST00000440053 SAMD1Q6SPF0 538 aaPredicted RBP24.77■■□□□ 1.56
VIL1-204ENST00000440053 VCPKMTQ9H867 229 aa24.77■■□□□ 1.56
VIL1-204ENST00000440053 KANSL2Q9H9L4 492 aa24.77■■□□□ 1.56
VIL1-204ENST00000440053 PLEKHH3Q7Z736 793 aa24.77■■□□□ 1.56
VIL1-204ENST00000440053 CHD1LQ86WJ1 897 aa24.77■■□□□ 1.56
VIL1-204ENST00000440053 NUDT12Q9BQG2 462 aa24.77■■□□□ 1.56
VIL1-204ENST00000440053 GJA8P48165 433 aa24.76■■□□□ 1.55
VIL1-204ENST00000440053 NUCB1Q02818 461 aa24.76■■□□□ 1.55
VIL1-204ENST00000440053 VPS53Q5VIR6 699 aa24.76■■□□□ 1.55
VIL1-204ENST00000440053 LBX2Q6XYB7 198 aa24.76■■□□□ 1.55
VIL1-204ENST00000440053 HOXC10Q9NYD6 342 aa24.76■■□□□ 1.55
VIL1-204ENST00000440053 RAD21O60216 631 aa24.75■■□□□ 1.55
VIL1-204ENST00000440053 MORN1Q5T089 497 aa24.75■■□□□ 1.55
VIL1-204ENST00000440053 WDR78Q5VTH9 848 aa24.75■■□□□ 1.55
VIL1-204ENST00000440053 PLEKHM2Q8IWE5 1019 aa24.75■■□□□ 1.55
VIL1-204ENST00000440053 U2AF1L4Q8WU68 220 aaKnown RBP24.75■■□□□ 1.55
VIL1-204ENST00000440053 TRIB2Q92519 343 aa24.75■■□□□ 1.55
VIL1-204ENST00000440053 USP6NLQ92738 828 aa24.75■■□□□ 1.55
VIL1-204ENST00000440053 FAM227BQ96M60 508 aa24.75■■□□□ 1.55
VIL1-204ENST00000440053 INCENPQ9NQS7 918 aa24.75■■□□□ 1.55
VIL1-204ENST00000440053 PLXNB2O15031 1838 aa24.75■■□□□ 1.55
VIL1-204ENST00000440053 ROBO3Q96MS0 1386 aa24.74■■□□□ 1.55
VIL1-204ENST00000440053 CCL14Q16627 93 aa24.74■■□□□ 1.55
VIL1-204ENST00000440053 LPAR1Q92633 364 aa24.74■■□□□ 1.55
VIL1-204ENST00000440053 DEFB118Q96PH6 123 aa24.74■■□□□ 1.55
VIL1-204ENST00000440053 NACAP1Q9BZK3 213 aa24.74■■□□□ 1.55
VIL1-204ENST00000440053 NAPBQ9H115 298 aa24.74■■□□□ 1.55
VIL1-204ENST00000440053 SH2D4AQ9H788 454 aa24.74■■□□□ 1.55
VIL1-204ENST00000440053 MYH8P13535 1937 aa24.73■■□□□ 1.55
VIL1-204ENST00000440053 TRIM6-TRIM34B2RNG4 842 aa24.73■■□□□ 1.55
VIL1-204ENST00000440053 FLOT1O75955 427 aa24.73■■□□□ 1.55
VIL1-204ENST00000440053 SGPL1O95470 568 aa24.73■■□□□ 1.55
VIL1-204ENST00000440053 DSG3P32926 999 aa24.73■■□□□ 1.55
VIL1-204ENST00000440053 ZNF444Q8N0Y2 327 aaPredicted RBP24.73■■□□□ 1.55
VIL1-204ENST00000440053 RILPL2Q969X0 211 aa24.73■■□□□ 1.55
VIL1-204ENST00000440053 ATG4CQ96DT6 458 aa24.73■■□□□ 1.55
VIL1-204ENST00000440053 CWC22Q9HCG8 908 aaKnown RBP24.73■■□□□ 1.55
VIL1-204ENST00000440053 FBXO28Q9NVF7 368 aa24.73■■□□□ 1.55
VIL1-204ENST00000440053 HMGCRP04035 888 aa24.72■■□□□ 1.55
VIL1-204ENST00000440053 CCNA1P78396 465 aa24.72■■□□□ 1.55
VIL1-204ENST00000440053 PPARAQ07869 468 aa24.72■■□□□ 1.55
VIL1-204ENST00000440053 CLIP2Q9UDT6 1046 aa24.72■■□□□ 1.55
VIL1-204ENST00000440053 TACC3Q9Y6A5 838 aa24.72■■□□□ 1.55
VIL1-204ENST00000440053 A0A0D9SFI3 127 aa24.71■■□□□ 1.55
VIL1-204ENST00000440053 CTDSPL2Q05D32 466 aa24.71■■□□□ 1.55
VIL1-204ENST00000440053 FAM47AQ5JRC9 791 aa24.71■■□□□ 1.55
VIL1-204ENST00000440053 NKX2-3Q8TAU0 364 aa24.71■■□□□ 1.55
VIL1-204ENST00000440053 NUP88Q99567 741 aaPredicted RBP24.71■■□□□ 1.55
VIL1-204ENST00000440053 MOV10L1Q9BXT6 1211 aaKnown RBP24.71■■□□□ 1.55
VIL1-204ENST00000440053 PAK6Q9NQU5 681 aaPredicted RBP24.71■■□□□ 1.55
VIL1-204ENST00000440053 PDE4DIPQ5VU43 2346 aa24.71■■□□□ 1.55
VIL1-204ENST00000440053 IGKV6D-41A0A0C4DH26 115 aa24.7■■□□□ 1.55
VIL1-204ENST00000440053 WDR46O15213 610 aaKnown RBP24.7■■□□□ 1.55
VIL1-204ENST00000440053 TFRCP02786 760 aaKnown RBP24.7■■□□□ 1.55
VIL1-204ENST00000440053 PTPREP23469 700 aa24.7■■□□□ 1.55
VIL1-204ENST00000440053 FAM83BQ5T0W9 1011 aa24.7■■□□□ 1.55
VIL1-204ENST00000440053 PRPF38BQ5VTL8 546 aaKnown RBP24.7■■□□□ 1.55
VIL1-204ENST00000440053 SOCS4Q8WXH5 440 aa24.7■■□□□ 1.55
VIL1-204ENST00000440053 HELLSQ9NRZ9 838 aa24.7■■□□□ 1.55
VIL1-204ENST00000440053 NYAP2Q9P242 653 aa24.7■■□□□ 1.55
VIL1-204ENST00000440053 XRCC5P13010 732 aaKnown RBP24.7■■□□□ 1.54
VIL1-204ENST00000440053 NMIQ13287 307 aaPredicted RBP24.7■■□□□ 1.54
VIL1-204ENST00000440053 PLS1Q14651 629 aa24.7■■□□□ 1.54
VIL1-204ENST00000440053 SPATC1LQ9H0A9 340 aa24.7■■□□□ 1.54
VIL1-204ENST00000440053 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.7■■□□□ 1.542e-7■■□□□ 13.5
VIL1-204ENST00000440053 RGS2P41220 211 aa24.69■■□□□ 1.54
VIL1-204ENST00000440053 MAP2K5Q13163 448 aa24.69■■□□□ 1.54
VIL1-204ENST00000440053 MCMDC2Q4G0Z9 681 aa24.69■■□□□ 1.54
VIL1-204ENST00000440053 CEP95Q96GE4 821 aa24.69■■□□□ 1.54
VIL1-204ENST00000440053 GOPCQ9HD26 462 aa24.69■■□□□ 1.54
VIL1-204ENST00000440053 RLFQ13129 1914 aa24.68■■□□□ 1.54
VIL1-204ENST00000440053 F5H6K3 240 aa24.68■■□□□ 1.54
VIL1-204ENST00000440053 TFAP4Q01664 338 aa24.68■■□□□ 1.54
VIL1-204ENST00000440053 KLRC3Q07444 240 aa24.68■■□□□ 1.54
VIL1-204ENST00000440053 CACNB2Q08289 660 aaPredicted RBP24.68■■□□□ 1.54
VIL1-204ENST00000440053 UBE2Q1Q7Z7E8 422 aa24.68■■□□□ 1.54
VIL1-204ENST00000440053 ZNF589Q86UQ0 364 aaPredicted RBP24.68■■□□□ 1.54
VIL1-204ENST00000440053 ZNF287Q9HBT7 754 aa24.68■■□□□ 1.54
VIL1-204ENST00000440053 FLRT1Q9NZU1 646 aa24.68■■□□□ 1.54
VIL1-204ENST00000440053 RPTORQ8N122 1335 aa24.67■■□□□ 1.54
VIL1-204ENST00000440053 SLC15A5A6NIM6 579 aa24.67■■□□□ 1.54
VIL1-204ENST00000440053 ERCC3P19447 782 aa24.67■■□□□ 1.54
VIL1-204ENST00000440053 PDE4BQ07343 736 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms