RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 KCTD1Q719H9 257 aa17.33■□□□□ 0.36
CPSF7-205ENST00000439958 KCNG4Q8TDN1 519 aa17.33■□□□□ 0.36
CPSF7-205ENST00000439958 TRIM44Q96DX7 344 aaPredicted RBP17.33■□□□□ 0.36
CPSF7-205ENST00000439958 RCOR1Q9UKL0 485 aa17.33■□□□□ 0.36
CPSF7-205ENST00000439958 ELP1O95163 1332 aa17.33■□□□□ 0.36
CPSF7-205ENST00000439958 NLGN2Q8NFZ4 835 aa17.33■□□□□ 0.36
CPSF7-205ENST00000439958 GOLPH3LQ9H4A5 285 aa17.33■□□□□ 0.36
CPSF7-205ENST00000439958 ZNRF3Q9ULT6 936 aa17.33■□□□□ 0.36
CPSF7-205ENST00000439958 CXCL9Q07325 125 aa17.32■□□□□ 0.36
CPSF7-205ENST00000439958 ZNF174Q15697 407 aa17.32■□□□□ 0.36
CPSF7-205ENST00000439958 SASS6Q6UVJ0 657 aa17.32■□□□□ 0.36
CPSF7-205ENST00000439958 CCDC125Q86Z20 511 aa17.32■□□□□ 0.36
CPSF7-205ENST00000439958 FAM198AQ9UFP1 575 aa17.32■□□□□ 0.36
CPSF7-205ENST00000439958 CNTNAP5Q8WYK1 1306 aa17.32■□□□□ 0.36
CPSF7-205ENST00000439958 TOP1P11387 765 aaKnown RBP17.32■□□□□ 0.36
CPSF7-205ENST00000439958 PKN1Q16512 942 aa17.32■□□□□ 0.36
CPSF7-205ENST00000439958 SPICE1Q8N0Z3 855 aa17.32■□□□□ 0.36
CPSF7-205ENST00000439958 MRPS27Q92552 414 aaKnown RBP17.32■□□□□ 0.36
CPSF7-205ENST00000439958 PI4KBQ9UBF8 816 aa17.32■□□□□ 0.36
CPSF7-205ENST00000439958 PCDHB6Q9Y5E3 794 aa17.32■□□□□ 0.36
CPSF7-205ENST00000439958 BIN1O00499 593 aa17.31■□□□□ 0.36
CPSF7-205ENST00000439958 PRPF3O43395 683 aaKnown RBP17.31■□□□□ 0.36
CPSF7-205ENST00000439958 PPP2R5BQ15173 497 aa17.31■□□□□ 0.36
CPSF7-205ENST00000439958 RTEL1Q9NZ71 1219 aa17.31■□□□□ 0.36
CPSF7-205ENST00000439958 STK36Q9NRP7 1315 aa17.31■□□□□ 0.36
CPSF7-205ENST00000439958 NAPAP54920 295 aa17.31■□□□□ 0.36
CPSF7-205ENST00000439958 CCDC178Q5BJE1 867 aa17.31■□□□□ 0.36
CPSF7-205ENST00000439958 SERPINA10Q9UK55 444 aa17.31■□□□□ 0.36
CPSF7-205ENST00000439958 NDUFA8P51970 172 aa17.31■□□□□ 0.36
CPSF7-205ENST00000439958 SEPT2Q15019 361 aa17.31■□□□□ 0.36
CPSF7-205ENST00000439958 C10orf71Q711Q0 1435 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 MYO1BO43795 1136 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 CIAPIN1Q6FI81 312 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 ARHGAP27Q6ZUM4 889 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 JMYQ8N9B5 988 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 MTMR4Q9NYA4 1195 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 CCDC192P0DO97 292 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 MCM7P33993 719 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 SHMT1P34896 483 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 GNAQP50148 359 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 DDX19AQ9NUU7 478 aaKnown RBP17.3■□□□□ 0.36
CPSF7-205ENST00000439958 MAD2L2Q9UI95 211 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 TTLL1O95922 423 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 NBPF9Q3BBW0 867 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 CDAN1Q8IWY9 1227 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 PIGSQ96S52 555 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 TMEM39BQ9GZU3 492 aa17.3■□□□□ 0.36
CPSF7-205ENST00000439958 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.3■□□□□ 0.368e-6■■□□□ 11.4
CPSF7-205ENST00000439958 TGFB2P61812 414 aa17.29■□□□□ 0.36
CPSF7-205ENST00000439958 TBC1D10BQ4KMP7 808 aaPredicted RBP17.29■□□□□ 0.36
CPSF7-205ENST00000439958 EARS2Q5JPH6 523 aaKnown RBP17.29■□□□□ 0.36
CPSF7-205ENST00000439958 SOGA3Q5TF21 947 aa17.29■□□□□ 0.36
CPSF7-205ENST00000439958 GH2P01242 217 aa17.29■□□□□ 0.36
CPSF7-205ENST00000439958 RASSF8Q8NHQ8 419 aa17.29■□□□□ 0.36
CPSF7-205ENST00000439958 POLR3EQ9NVU0 708 aa17.29■□□□□ 0.36
CPSF7-205ENST00000439958 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.29■□□□□ 0.36
CPSF7-205ENST00000439958 CCDC194A0A1B0GVG4 234 aa17.29■□□□□ 0.36
CPSF7-205ENST00000439958 PTMAP06454 111 aaKnown RBP17.29■□□□□ 0.36
CPSF7-205ENST00000439958 SNAP25P60880 206 aa17.29■□□□□ 0.36
CPSF7-205ENST00000439958 TTBK2Q6IQ55 1244 aa17.29■□□□□ 0.36
CPSF7-205ENST00000439958 RRP36Q96EU6 259 aaKnown RBP17.29■□□□□ 0.36
CPSF7-205ENST00000439958 PSMD1Q99460 953 aa17.29■□□□□ 0.36
CPSF7-205ENST00000439958 NUP88Q99567 741 aaPredicted RBP17.29■□□□□ 0.36
CPSF7-205ENST00000439958 ICA1Q05084 483 aa17.28■□□□□ 0.36
CPSF7-205ENST00000439958 FUT2Q10981 343 aa17.28■□□□□ 0.36
CPSF7-205ENST00000439958 GRM4Q14833 912 aa17.28■□□□□ 0.36
CPSF7-205ENST00000439958 CCDC84Q86UT8 332 aaPredicted RBP17.28■□□□□ 0.36
CPSF7-205ENST00000439958 UIMC1Q96RL1 719 aa17.28■□□□□ 0.36
CPSF7-205ENST00000439958 NOL7Q9UMY1 257 aaKnown RBP17.28■□□□□ 0.36
CPSF7-205ENST00000439958 SCN9AQ15858 1988 aa17.28■□□□□ 0.36
CPSF7-205ENST00000439958 TRIM75PA6NK02 468 aa17.28■□□□□ 0.36
CPSF7-205ENST00000439958 CYTH3O43739 400 aa17.28■□□□□ 0.36
CPSF7-205ENST00000439958 YEATS4O95619 227 aa17.28■□□□□ 0.36
CPSF7-205ENST00000439958 RCAN1P53805 252 aa17.28■□□□□ 0.36
CPSF7-205ENST00000439958 SH3BP5LQ7L8J4 393 aa17.28■□□□□ 0.36
CPSF7-205ENST00000439958 SAMD7Q7Z3H4 446 aa17.28■□□□□ 0.36
CPSF7-205ENST00000439958 UPF1Q92900 1129 aaKnown RBP eCLIP17.28■□□□□ 0.367e-8■■■□□ 18.4
CPSF7-205ENST00000439958 SWAP70Q9UH65 585 aa17.28■□□□□ 0.36
CPSF7-205ENST00000439958 SPDYE2BA6NHP3 402 aa17.27■□□□□ 0.36
CPSF7-205ENST00000439958 LETM1O95202 739 aaPredicted RBP17.27■□□□□ 0.36
CPSF7-205ENST00000439958 SPDYE6P0CI01 402 aa17.27■□□□□ 0.36
CPSF7-205ENST00000439958 SLC1A4P43007 532 aa17.27■□□□□ 0.36
CPSF7-205ENST00000439958 ABCB5Q2M3G0 1257 aa17.27■□□□□ 0.36
CPSF7-205ENST00000439958 COA7Q96BR5 231 aa17.27■□□□□ 0.36
CPSF7-205ENST00000439958 SHISA4Q96DD7 197 aa17.27■□□□□ 0.36
CPSF7-205ENST00000439958 DHX36Q9H2U1 1008 aaKnown RBP17.27■□□□□ 0.36
CPSF7-205ENST00000439958 ADAMTS3O15072 1205 aa17.27■□□□□ 0.36
CPSF7-205ENST00000439958 EEF2P13639 858 aaKnown RBP17.27■□□□□ 0.36
CPSF7-205ENST00000439958 U2AF2P26368 475 aaKnown RBP eCLIP17.27■□□□□ 0.361e-6■■■□□ 18.8
CPSF7-205ENST00000439958 FAM160A1Q05DH4 1040 aa17.27■□□□□ 0.36
CPSF7-205ENST00000439958 RILPL1Q5EBL4 403 aa17.27■□□□□ 0.36
CPSF7-205ENST00000439958 ATL3Q6DD88 541 aa17.27■□□□□ 0.36
CPSF7-205ENST00000439958 DNAJC18Q9H819 358 aa17.27■□□□□ 0.36
CPSF7-205ENST00000439958 USP25Q9UHP3 1055 aa17.27■□□□□ 0.36
CPSF7-205ENST00000439958 TIAM2Q8IVF5 1701 aa17.27■□□□□ 0.36
CPSF7-205ENST00000439958 SLC39A14Q15043 492 aa17.27■□□□□ 0.35
CPSF7-205ENST00000439958 PFKFB3Q16875 520 aaPredicted RBP17.27■□□□□ 0.35
CPSF7-205ENST00000439958 ADALQ6DHV7 355 aa17.27■□□□□ 0.35
CPSF7-205ENST00000439958 DNAJC25Q9H1X3 360 aa17.27■□□□□ 0.35
CPSF7-205ENST00000439958 FOXP1Q9H334 677 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms