RNA–Protein interactions for RNA: ENST00000439482.5

TTC39A-211, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 5

Gene TTC39A, Length 978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-211ENST00000439482 PKN1Q16512 942 aa13.12□□□□□ -0.31
TTC39A-211ENST00000439482 PFKFB3Q16875 520 aaPredicted RBP13.12□□□□□ -0.31
TTC39A-211ENST00000439482 GPATCH4Q5T3I0 446 aaKnown RBP13.12□□□□□ -0.31
TTC39A-211ENST00000439482 RBM26Q5T8P6 1007 aaKnown RBP13.12□□□□□ -0.31
TTC39A-211ENST00000439482 MYSM1Q5VVJ2 828 aa13.12□□□□□ -0.31
TTC39A-211ENST00000439482 OTUD7BQ6GQQ9 843 aa13.12□□□□□ -0.31
TTC39A-211ENST00000439482 ARHGAP27Q6ZUM4 889 aa13.12□□□□□ -0.31
TTC39A-211ENST00000439482 CCDC82Q8N4S0 544 aa13.12□□□□□ -0.31
TTC39A-211ENST00000439482 KCNG4Q8TDN1 519 aa13.12□□□□□ -0.31
TTC39A-211ENST00000439482 GDPD2Q9HCC8 539 aa13.12□□□□□ -0.31
TTC39A-211ENST00000439482 GINM1Q9NU53 330 aa13.12□□□□□ -0.31
TTC39A-211ENST00000439482 TFIP11Q9UBB9 837 aaKnown RBP13.12□□□□□ -0.31
TTC39A-211ENST00000439482 CLIP2Q9UDT6 1046 aa13.12□□□□□ -0.31
TTC39A-211ENST00000439482 MAD2L2Q9UI95 211 aa13.12□□□□□ -0.31
TTC39A-211ENST00000439482 CNTNAP5Q8WYK1 1306 aa13.12□□□□□ -0.31
TTC39A-211ENST00000439482 COL4A5P29400 1685 aa13.12□□□□□ -0.31
TTC39A-211ENST00000439482 TCP10L2B9ZVM9 353 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 KLRF2D3W0D1 207 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 H7C1D1 291 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 hCG_1984214I3L0E3 225 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 WNT10BO00744 389 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 GRIN3BO60391 1043 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 SNHG28P0DPA3 235 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 GUCY1A2P33402 732 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 NASPP49321 788 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-211ENST00000439482 GMPSP49915 693 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-211ENST00000439482 RASSF7Q02833 373 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 ABCB5Q2M3G0 1257 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 RILPL1Q5EBL4 403 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 FAM173BQ6P4H8 233 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 NOSTRINQ8IVI9 506 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 DIS3L2Q8IYB7 885 aaKnown RBP13.11□□□□□ -0.31
TTC39A-211ENST00000439482 ZNF713Q8N859 430 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-211ENST00000439482 JMYQ8N9B5 988 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 CCDC148Q8NFR7 591 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 GPT2Q8TD30 523 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 CCDC12Q8WUD4 166 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-211ENST00000439482 HOOK2Q96ED9 719 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 CHAMP1Q96JM3 812 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 AIFM3Q96NN9 605 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 DNAJC18Q9H819 358 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.11□□□□□ -0.31
TTC39A-211ENST00000439482 BAZ2AQ9UIF9 1905 aaKnown RBP13.11□□□□□ -0.31
TTC39A-211ENST00000439482 SCN9AQ15858 1988 aa13.11□□□□□ -0.31
TTC39A-211ENST00000439482 CLRN2A0PK11 232 aa13.1□□□□□ -0.31
TTC39A-211ENST00000439482 KRT2P35908 639 aa13.1□□□□□ -0.31
TTC39A-211ENST00000439482 MAP3K10Q02779 954 aa13.1□□□□□ -0.31
TTC39A-211ENST00000439482 CAVIN1Q6NZI2 390 aaKnown RBP13.1□□□□□ -0.31
TTC39A-211ENST00000439482 GPC2Q8N158 579 aa13.1□□□□□ -0.31
TTC39A-211ENST00000439482 CMTR1Q8N1G2 835 aaKnown RBP13.1□□□□□ -0.31
TTC39A-211ENST00000439482 RRP36Q96EU6 259 aaKnown RBP13.1□□□□□ -0.31
TTC39A-211ENST00000439482 PHF20Q9BVI0 1012 aa13.1□□□□□ -0.31
TTC39A-211ENST00000439482 VEZTQ9HBM0 779 aa13.1□□□□□ -0.31
TTC39A-211ENST00000439482 CNOT7Q9UIV1 285 aaKnown RBP13.1□□□□□ -0.31
TTC39A-211ENST00000439482 GADD45BO75293 160 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-211ENST00000439482 BMP15O95972 392 aa13.09□□□□□ -0.31
TTC39A-211ENST00000439482 PDHBP11177 359 aa13.09□□□□□ -0.31
TTC39A-211ENST00000439482 ZNF445P59923 1031 aa13.09□□□□□ -0.31
TTC39A-211ENST00000439482 STK38Q15208 465 aa13.09□□□□□ -0.31
TTC39A-211ENST00000439482 SF3A1Q15459 793 aaKnown RBP13.09□□□□□ -0.31
TTC39A-211ENST00000439482 ANO1Q5XXA6 986 aa13.09□□□□□ -0.31
TTC39A-211ENST00000439482 MICALL2Q8IY33 904 aa13.09□□□□□ -0.31
TTC39A-211ENST00000439482 ZNF526Q8TF50 670 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-211ENST00000439482 DCAF4Q8WV16 495 aa13.09□□□□□ -0.31
TTC39A-211ENST00000439482 USP28Q96RU2 1077 aa13.09□□□□□ -0.31
TTC39A-211ENST00000439482 GZF1Q9H116 711 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-211ENST00000439482 RIOX1Q9H6W3 641 aa13.09□□□□□ -0.31
TTC39A-211ENST00000439482 GPBP1L1Q9HC44 474 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-211ENST00000439482 SEC63Q9UGP8 760 aaKnown RBP13.09□□□□□ -0.31
TTC39A-211ENST00000439482 CEP131Q9UPN4 1083 aa13.09□□□□□ -0.31
TTC39A-211ENST00000439482 GJA3Q9Y6H8 435 aa13.09□□□□□ -0.31
TTC39A-211ENST00000439482 MORC2Q9Y6X9 1032 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-211ENST00000439482 CNTNAP1P78357 1384 aa13.08□□□□□ -0.31
TTC39A-211ENST00000439482 A0A1W2PQ27 194 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 A0A1W2PQ64 194 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 A0A1W2PQD8 194 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 BTBD18B2RXH4 712 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 KIF28PB7ZC32 967 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 TRAPPC10P48553 1259 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 NLRP5P59047 1200 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 ICA1Q05084 483 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 ZNF543Q08ER8 600 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 SLC39A14Q15043 492 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 CCDC183Q5T5S1 534 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 STAG2Q8N3U4 1231 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 LINC00301Q8NCQ3 95 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 GMCL1P1Q8NEA9 526 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 SH2D4AQ9H788 454 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 NOL7Q9UMY1 257 aaKnown RBP13.08□□□□□ -0.32
TTC39A-211ENST00000439482 FER1L6Q2WGJ9 1857 aa13.08□□□□□ -0.32
TTC39A-211ENST00000439482 USP17L5A8MUK1 530 aa13.07□□□□□ -0.32
TTC39A-211ENST00000439482 SPTLC2O15270 562 aa13.07□□□□□ -0.32
TTC39A-211ENST00000439482 PPP6R2O75170 966 aa13.07□□□□□ -0.32
TTC39A-211ENST00000439482 EEF2P13639 858 aaKnown RBP13.07□□□□□ -0.32
TTC39A-211ENST00000439482 ME1P48163 572 aa13.07□□□□□ -0.32
TTC39A-211ENST00000439482 KIF4BQ2VIQ3 1234 aa13.07□□□□□ -0.32
TTC39A-211ENST00000439482 NBPF9Q3BBW0 867 aa13.07□□□□□ -0.32
TTC39A-211ENST00000439482 L1TD1Q5T7N2 865 aaKnown RBP13.07□□□□□ -0.32
TTC39A-211ENST00000439482 ADALQ6DHV7 355 aa13.07□□□□□ -0.32
TTC39A-211ENST00000439482 USP17L2Q6R6M4 530 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms