RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 RASA1P20936 1047 aa16.57■□□□□ 0.24
PRAME-209ENST00000439106 UBXN2AP68543 259 aa16.57■□□□□ 0.24
PRAME-209ENST00000439106 SBK1Q52WX2 424 aa16.57■□□□□ 0.24
PRAME-209ENST00000439106 ZMYM1Q5SVZ6 1142 aa16.57■□□□□ 0.24
PRAME-209ENST00000439106 TANGO6Q9C0B7 1094 aa16.57■□□□□ 0.24
PRAME-209ENST00000439106 BTBD7Q9P203 1132 aa16.57■□□□□ 0.24
PRAME-209ENST00000439106 PRDM1O75626 825 aa16.56■□□□□ 0.24
PRAME-209ENST00000439106 EEF2P13639 858 aaKnown RBP16.56■□□□□ 0.24
PRAME-209ENST00000439106 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
PRAME-209ENST00000439106 GPR142Q7Z601 462 aa16.56■□□□□ 0.24
PRAME-209ENST00000439106 SMC5Q8IY18 1101 aa16.56■□□□□ 0.24
PRAME-209ENST00000439106 IFNL3Q8IZI9 196 aa16.56■□□□□ 0.24
PRAME-209ENST00000439106 PXYLP1Q8TE99 480 aa16.56■□□□□ 0.24
PRAME-209ENST00000439106 CCDC17Q96LX7 622 aa16.56■□□□□ 0.24
PRAME-209ENST00000439106 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.56■□□□□ 0.24
PRAME-209ENST00000439106 ARHGEF10LQ9HCE6 1279 aa16.56■□□□□ 0.24
PRAME-209ENST00000439106 RAD21O60216 631 aa16.55■□□□□ 0.24
PRAME-209ENST00000439106 WDR78Q5VTH9 848 aa16.55■□□□□ 0.24
PRAME-209ENST00000439106 GIMAP6Q6P9H5 292 aa16.55■□□□□ 0.24
PRAME-209ENST00000439106 CCAR1Q8IX12 1150 aaKnown RBP16.55■□□□□ 0.24
PRAME-209ENST00000439106 TRIB2Q92519 343 aa16.55■□□□□ 0.24
PRAME-209ENST00000439106 RWDD1Q9H446 243 aaPredicted RBP16.55■□□□□ 0.24
PRAME-209ENST00000439106 VCPKMTQ9H867 229 aa16.55■□□□□ 0.24
PRAME-209ENST00000439106 STAP2Q9UGK3 403 aa16.55■□□□□ 0.24
PRAME-209ENST00000439106 TMX2Q9Y320 296 aa16.55■□□□□ 0.24
PRAME-209ENST00000439106 RABGAP1Q9Y3P9 1069 aa16.55■□□□□ 0.24
PRAME-209ENST00000439106 ZNF236Q9UL36 1845 aa16.54■□□□□ 0.24
PRAME-209ENST00000439106 PATL2C9JE40 543 aaKnown RBP16.54■□□□□ 0.24
PRAME-209ENST00000439106 FOXP2O15409 715 aa16.54■□□□□ 0.24
PRAME-209ENST00000439106 GNAT2P19087 354 aa16.54■□□□□ 0.24
PRAME-209ENST00000439106 LRRFIP1Q32MZ4 808 aaKnown RBP16.54■□□□□ 0.24
PRAME-209ENST00000439106 GTF3C2Q8WUA4 911 aaPredicted RBP16.54■□□□□ 0.24
PRAME-209ENST00000439106 MKNK2Q9HBH9 465 aa16.54■□□□□ 0.24
PRAME-209ENST00000439106 LAMA4Q16363 1823 aa16.54■□□□□ 0.24
PRAME-209ENST00000439106 FLOT1O75955 427 aa16.53■□□□□ 0.24
PRAME-209ENST00000439106 HMGCRP04035 888 aa16.53■□□□□ 0.24
PRAME-209ENST00000439106 GJB1P08034 283 aa16.53■□□□□ 0.24
PRAME-209ENST00000439106 MAPK4P31152 587 aa16.53■□□□□ 0.24
PRAME-209ENST00000439106 GJA8P48165 433 aa16.53■□□□□ 0.24
PRAME-209ENST00000439106 AAMPQ13685 434 aa16.53■□□□□ 0.24
PRAME-209ENST00000439106 CCL14Q16627 93 aa16.53■□□□□ 0.24
PRAME-209ENST00000439106 VPS53Q5VIR6 699 aa16.53■□□□□ 0.24
PRAME-209ENST00000439106 PRPF38BQ5VTL8 546 aaKnown RBP16.53■□□□□ 0.24
PRAME-209ENST00000439106 PLEKHH3Q7Z736 793 aa16.53■□□□□ 0.24
PRAME-209ENST00000439106 U2AF1L4Q8WU68 220 aaKnown RBP16.53■□□□□ 0.24
PRAME-209ENST00000439106 EVI5LQ96CN4 794 aa16.53■□□□□ 0.24
PRAME-209ENST00000439106 ATG4CQ96DT6 458 aa16.53■□□□□ 0.24
PRAME-209ENST00000439106 FAM227BQ96M60 508 aa16.53■□□□□ 0.24
PRAME-209ENST00000439106 DEFB118Q96PH6 123 aa16.53■□□□□ 0.24
PRAME-209ENST00000439106 NUDT12Q9BQG2 462 aa16.53■□□□□ 0.24
PRAME-209ENST00000439106 CWC22Q9HCG8 908 aaKnown RBP16.53■□□□□ 0.24
PRAME-209ENST00000439106 A0A0D9SFI3 127 aa16.52■□□□□ 0.24
PRAME-209ENST00000439106 COG2Q14746 738 aa16.52■□□□□ 0.24
PRAME-209ENST00000439106 LBX2Q6XYB7 198 aa16.52■□□□□ 0.24
PRAME-209ENST00000439106 CHD1LQ86WJ1 897 aa16.52■□□□□ 0.24
PRAME-209ENST00000439106 NUP88Q99567 741 aaPredicted RBP16.52■□□□□ 0.24
PRAME-209ENST00000439106 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.52■□□□□ 0.24
PRAME-209ENST00000439106 NAPBQ9H115 298 aa16.52■□□□□ 0.24
PRAME-209ENST00000439106 SH2D4AQ9H788 454 aa16.52■□□□□ 0.24
PRAME-209ENST00000439106 KANSL2Q9H9L4 492 aa16.52■□□□□ 0.24
PRAME-209ENST00000439106 FBXO28Q9NVF7 368 aa16.52■□□□□ 0.24
PRAME-209ENST00000439106 MCM3APO60318 1980 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 TRIM6-TRIM34B2RNG4 842 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 WDR46O15213 610 aaKnown RBP16.51■□□□□ 0.23
PRAME-209ENST00000439106 NUCB1Q02818 461 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 CTDSPL2Q05D32 466 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 PPARAQ07869 468 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 MORN1Q5T089 497 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 FAM83BQ5T0W9 1011 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 PLEKHM2Q8IWE5 1019 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 SOCS4Q8WXH5 440 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 LPAR1Q92633 364 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 USP6NLQ92738 828 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 RILPL2Q969X0 211 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 NACAP1Q9BZK3 213 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 INCENPQ9NQS7 918 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 SMCHD1A6NHR9 2005 aa16.51■□□□□ 0.23
PRAME-209ENST00000439106 SGPL1O95470 568 aa16.5■□□□□ 0.23
PRAME-209ENST00000439106 DSG3P32926 999 aa16.5■□□□□ 0.23
PRAME-209ENST00000439106 CCNA1P78396 465 aa16.5■□□□□ 0.23
PRAME-209ENST00000439106 NMIQ13287 307 aaPredicted RBP16.5■□□□□ 0.23
PRAME-209ENST00000439106 PLS1Q14651 629 aa16.5■□□□□ 0.23
PRAME-209ENST00000439106 FAM47AQ5JRC9 791 aa16.5■□□□□ 0.23
PRAME-209ENST00000439106 ZNF589Q86UQ0 364 aaPredicted RBP16.5■□□□□ 0.23
PRAME-209ENST00000439106 NKX2-3Q8TAU0 364 aa16.5■□□□□ 0.23
PRAME-209ENST00000439106 MOV10L1Q9BXT6 1211 aaKnown RBP16.5■□□□□ 0.23
PRAME-209ENST00000439106 PAK6Q9NQU5 681 aaPredicted RBP16.5■□□□□ 0.23
PRAME-209ENST00000439106 TACC3Q9Y6A5 838 aa16.5■□□□□ 0.23
PRAME-209ENST00000439106 IGKV6D-41A0A0C4DH26 115 aa16.49■□□□□ 0.23
PRAME-209ENST00000439106 PRKAR2AP13861 404 aaKnown RBP16.49■□□□□ 0.23
PRAME-209ENST00000439106 ZKSCAN1P17029 563 aaPredicted RBP16.49■□□□□ 0.23
PRAME-209ENST00000439106 RGS2P41220 211 aa16.49■□□□□ 0.23
PRAME-209ENST00000439106 MAP2K5Q13163 448 aa16.49■□□□□ 0.23
PRAME-209ENST00000439106 ZNF444Q8N0Y2 327 aaPredicted RBP16.49■□□□□ 0.23
PRAME-209ENST00000439106 LRRC47Q8N1G4 583 aaKnown RBP16.49■□□□□ 0.23
PRAME-209ENST00000439106 CHMP4CQ96CF2 233 aa16.49■□□□□ 0.23
PRAME-209ENST00000439106 CEP95Q96GE4 821 aa16.49■□□□□ 0.23
PRAME-209ENST00000439106 APBA2Q99767 749 aa16.49■□□□□ 0.23
PRAME-209ENST00000439106 SPATC1LQ9H0A9 340 aa16.49■□□□□ 0.23
PRAME-209ENST00000439106 GOPCQ9HD26 462 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms