RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 APOA5Q6Q788 366 aa11.39□□□□□ -0.59
CUBN-204ENST00000438254 IQCA1Q86XH1 822 aa11.39□□□□□ -0.59
CUBN-204ENST00000438254 CRACR2BQ8N4Y2 399 aaPredicted RBP11.39□□□□□ -0.59
CUBN-204ENST00000438254 GTF3C6Q969F1 213 aa11.39□□□□□ -0.59
CUBN-204ENST00000438254 POLR2AP24928 1970 aaKnown RBP11.39□□□□□ -0.59
CUBN-204ENST00000438254 KLF18A0A0U1RQI7 1052 aa11.38□□□□□ -0.59
CUBN-204ENST00000438254 SCRN1Q12765 414 aa11.38□□□□□ -0.59
CUBN-204ENST00000438254 TROAPQ12815 778 aa11.38□□□□□ -0.59
CUBN-204ENST00000438254 WTAPQ15007 396 aa11.38□□□□□ -0.59
CUBN-204ENST00000438254 SART3Q15020 963 aaKnown RBP11.38□□□□□ -0.59
CUBN-204ENST00000438254 CERKLQ49MI3 558 aaPredicted RBP11.38□□□□□ -0.59
CUBN-204ENST00000438254 CCDC178Q5BJE1 867 aa11.38□□□□□ -0.59
CUBN-204ENST00000438254 NOL8Q76FK4 1167 aaKnown RBP11.38□□□□□ -0.59
CUBN-204ENST00000438254 PNMA8AQ86V59 439 aaPredicted RBP11.38□□□□□ -0.59
CUBN-204ENST00000438254 SIAH1Q8IUQ4 282 aa11.38□□□□□ -0.59
CUBN-204ENST00000438254 TMTC2Q8N394 836 aa11.38□□□□□ -0.59
CUBN-204ENST00000438254 CEP95Q96GE4 821 aa11.38□□□□□ -0.59
CUBN-204ENST00000438254 INTS4Q96HW7 963 aaKnown RBP11.38□□□□□ -0.59
CUBN-204ENST00000438254 UBAC1Q9BSL1 405 aa11.38□□□□□ -0.59
CUBN-204ENST00000438254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.38□□□□□ -0.59
CUBN-204ENST00000438254 FAM217BQ9NTX9 383 aaPredicted RBP11.38□□□□□ -0.59
CUBN-204ENST00000438254 MTMR4Q9NYA4 1195 aa11.38□□□□□ -0.59
CUBN-204ENST00000438254 ZNF112Q9UJU3 913 aa11.38□□□□□ -0.59
CUBN-204ENST00000438254 CTDNEP1O95476 244 aa11.37□□□□□ -0.59
CUBN-204ENST00000438254 MIGA2Q7L4E1 593 aa11.37□□□□□ -0.59
CUBN-204ENST00000438254 LHX6Q9UPM6 363 aa11.37□□□□□ -0.59
CUBN-204ENST00000438254 PCDHGA4Q9Y5G9 962 aa11.37□□□□□ -0.59
CUBN-204ENST00000438254 ERICH2A1L162 156 aa11.36□□□□□ -0.59
CUBN-204ENST00000438254 ADM5C9JUS6 153 aa11.36□□□□□ -0.59
CUBN-204ENST00000438254 VEGFAP15692 232 aaPredicted RBP11.36□□□□□ -0.59
CUBN-204ENST00000438254 CAP2P40123 477 aa11.36□□□□□ -0.59
CUBN-204ENST00000438254 FGD1P98174 961 aa11.36□□□□□ -0.59
CUBN-204ENST00000438254 IFIT1BQ5T764 474 aaKnown RBP11.36□□□□□ -0.59
CUBN-204ENST00000438254 PRAMEF18Q5VWM3 479 aa11.36□□□□□ -0.59
CUBN-204ENST00000438254 DLK2Q6UY11 383 aa11.36□□□□□ -0.59
CUBN-204ENST00000438254 TMEM179Q6ZVK1 233 aa11.36□□□□□ -0.59
CUBN-204ENST00000438254 ZNF654Q8IZM8 581 aa11.36□□□□□ -0.59
CUBN-204ENST00000438254 NECAB1Q8N987 351 aa11.36□□□□□ -0.59
CUBN-204ENST00000438254 MKL1Q969V6 931 aa11.36□□□□□ -0.59
CUBN-204ENST00000438254 DCPSQ96C86 337 aaKnown RBP11.36□□□□□ -0.59
CUBN-204ENST00000438254 MAP3K14Q99558 947 aa11.36□□□□□ -0.59
CUBN-204ENST00000438254 TMEM47Q9BQJ4 181 aa11.36□□□□□ -0.59
CUBN-204ENST00000438254 NYAP2Q9P242 653 aa11.36□□□□□ -0.59
CUBN-204ENST00000438254 ATAD5Q96QE3 1844 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 CCDC69A6NI79 296 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 GOLGA8BA8MQT2 603 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 ZBTB43O43298 467 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 DDAH1O94760 285 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 GDF11O95390 407 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 GH2P01242 217 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 CDC27P30260 824 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 NTRK3Q16288 839 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 ABCB5Q2M3G0 1257 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 DCAF15Q66K64 600 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 POTEEQ6S8J3 1075 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 KRT26Q7Z3Y9 468 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 CLEC10AQ8IUN9 316 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 CCDC83Q8IWF9 413 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 SULF1Q8IWU6 871 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 SMARCC2Q8TAQ2 1214 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 KLRG1Q96E93 195 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 HOOK2Q96ED9 719 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 TRIM34Q9BYJ4 488 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 SLKQ9H2G2 1235 aaPredicted RBP11.35□□□□□ -0.59
CUBN-204ENST00000438254 KANSL2Q9H9L4 492 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 RRAGCQ9HB90 399 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 GINM1Q9NU53 330 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 ZBTB21Q9ULJ3 1066 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 SYNPO2Q9UMS6 1093 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 SLC12A7Q9Y666 1083 aa11.35□□□□□ -0.59
CUBN-204ENST00000438254 DOCK1Q14185 1865 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 TTLL1O95922 423 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 SNHG28P0DPA3 235 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 TOP1P11387 765 aaKnown RBP11.34□□□□□ -0.59
CUBN-204ENST00000438254 FUT2Q10981 343 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 STK3Q13188 491 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 SEPT2Q15019 361 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 MAP3K11Q16584 847 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 SUPT20HL1Q3ZLR7 823 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 NFXL1Q6ZNB6 911 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 FANCBQ8NB91 859 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 PNMA1Q8ND90 353 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 NSUN7Q8NE18 718 aaKnown RBP11.34□□□□□ -0.59
CUBN-204ENST00000438254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.34□□□□□ -0.59
CUBN-204ENST00000438254 TMC2Q8TDI7 906 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 LLPHQ9BRT6 129 aaKnown RBP11.34□□□□□ -0.59
CUBN-204ENST00000438254 MYL10Q9BUA6 226 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 ZNF341Q9BYN7 854 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 NCOA5Q9HCD5 579 aaKnown RBP11.34□□□□□ -0.59
CUBN-204ENST00000438254 NMRK2Q9NPI5 230 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 STX8Q9UNK0 236 aa11.34□□□□□ -0.59
CUBN-204ENST00000438254 A0A1W2PRG0 241 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 CTNND1O60716 968 aaKnown RBP11.33□□□□□ -0.6
CUBN-204ENST00000438254 USP2O75604 605 aaPredicted RBP11.33□□□□□ -0.6
CUBN-204ENST00000438254 CALM1P0DP23 149 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 CALM2P0DP24 149 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 CALM3P0DP25 149 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 EEF2P13639 858 aaKnown RBP11.33□□□□□ -0.6
CUBN-204ENST00000438254 RXRAP19793 462 aa11.33□□□□□ -0.6
CUBN-204ENST00000438254 INPP5BP32019 993 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms