RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 SUPT16HQ9Y5B9 1047 aaKnown RBP26.49■■□□□ 1.83
SEMA3B-205ENST00000434030 TDO2P48775 406 aa26.48■■□□□ 1.83
SEMA3B-205ENST00000434030 STK11IPQ8N1F8 1099 aa26.48■■□□□ 1.83
SEMA3B-205ENST00000434030 LNPKQ9C0E8 428 aa26.48■■□□□ 1.83
SEMA3B-205ENST00000434030 KANSL2Q9H9L4 492 aa26.48■■□□□ 1.83
SEMA3B-205ENST00000434030 ROBO3Q96MS0 1386 aa26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 COL11A1P12107 1806 aaPredicted RBP26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 SPDYE16A6NNV3 312 aaPredicted RBP26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 EEF2P13639 858 aaKnown RBP26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 GJA8P48165 433 aa26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 COG2Q14746 738 aa26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 B4GALNT3Q6L9W6 998 aa26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 CCAR1Q8IX12 1150 aaKnown RBP26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 NKX2-3Q8TAU0 364 aa26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 LPAR1Q92633 364 aa26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 EVI5LQ96CN4 794 aa26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 SHISA4Q96DD7 197 aa26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 NUDT12Q9BQG2 462 aa26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 SH2D4AQ9H788 454 aa26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 VCPKMTQ9H867 229 aa26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 BTBD7Q9P203 1132 aa26.47■■□□□ 1.83
SEMA3B-205ENST00000434030 RASA1P20936 1047 aa26.46■■□□□ 1.83
SEMA3B-205ENST00000434030 GPR142Q7Z601 462 aa26.46■■□□□ 1.83
SEMA3B-205ENST00000434030 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.46■■□□□ 1.83
SEMA3B-205ENST00000434030 TANGO6Q9C0B7 1094 aa26.46■■□□□ 1.83
SEMA3B-205ENST00000434030 MKNK2Q9HBH9 465 aa26.46■■□□□ 1.83
SEMA3B-205ENST00000434030 HOXC10Q9NYD6 342 aa26.46■■□□□ 1.83
SEMA3B-205ENST00000434030 A0A0G2JMZ2 1700 aa26.45■■□□□ 1.83
SEMA3B-205ENST00000434030 CYP2B6P20813 491 aa26.45■■□□□ 1.82
SEMA3B-205ENST00000434030 PRPF38BQ5VTL8 546 aaKnown RBP26.45■■□□□ 1.82
SEMA3B-205ENST00000434030 SPICE1Q8N0Z3 855 aa26.45■■□□□ 1.82
SEMA3B-205ENST00000434030 NACAP1Q9BZK3 213 aa26.45■■□□□ 1.82
SEMA3B-205ENST00000434030 ZNFX1Q9P2E3 1918 aaKnown RBP26.45■■□□□ 1.82
SEMA3B-205ENST00000434030 CCNA1P78396 465 aa26.44■■□□□ 1.82
SEMA3B-205ENST00000434030 ATP2B2Q01814 1243 aa26.44■■□□□ 1.82
SEMA3B-205ENST00000434030 PLEKHH3Q7Z736 793 aa26.44■■□□□ 1.82
SEMA3B-205ENST00000434030 SOCS4Q8WXH5 440 aa26.44■■□□□ 1.82
SEMA3B-205ENST00000434030 USP6NLQ92738 828 aa26.44■■□□□ 1.82
SEMA3B-205ENST00000434030 SGPL1O95470 568 aa26.43■■□□□ 1.82
SEMA3B-205ENST00000434030 HMGCRP04035 888 aa26.43■■□□□ 1.82
SEMA3B-205ENST00000434030 XRCC5P13010 732 aaKnown RBP26.43■■□□□ 1.82
SEMA3B-205ENST00000434030 MORN1Q5T089 497 aa26.43■■□□□ 1.82
SEMA3B-205ENST00000434030 CCDC129Q6ZRS4 1044 aa26.43■■□□□ 1.82
SEMA3B-205ENST00000434030 U2AF1L4Q8WU68 220 aaKnown RBP26.43■■□□□ 1.82
SEMA3B-205ENST00000434030 CHD1LQ86WJ1 897 aa26.42■■□□□ 1.82
SEMA3B-205ENST00000434030 TRIB2Q92519 343 aa26.42■■□□□ 1.82
SEMA3B-205ENST00000434030 PAK6Q9NQU5 681 aaPredicted RBP26.42■■□□□ 1.82
SEMA3B-205ENST00000434030 WDR46O15213 610 aaKnown RBP26.41■■□□□ 1.82
SEMA3B-205ENST00000434030 DSG3P32926 999 aa26.41■■□□□ 1.82
SEMA3B-205ENST00000434030 NUCB1Q02818 461 aa26.41■■□□□ 1.82
SEMA3B-205ENST00000434030 TRIM32Q13049 653 aa26.41■■□□□ 1.82
SEMA3B-205ENST00000434030 ZNF444Q8N0Y2 327 aaPredicted RBP26.41■■□□□ 1.82
SEMA3B-205ENST00000434030 NAPBQ9H115 298 aa26.41■■□□□ 1.82
SEMA3B-205ENST00000434030 ZNF287Q9HBT7 754 aa26.41■■□□□ 1.82
SEMA3B-205ENST00000434030 CWC22Q9HCG8 908 aaKnown RBP26.41■■□□□ 1.82
SEMA3B-205ENST00000434030 FOXP2O15409 715 aa26.4■■□□□ 1.82
SEMA3B-205ENST00000434030 PRDM1O75626 825 aa26.4■■□□□ 1.82
SEMA3B-205ENST00000434030 FLOT1O75955 427 aa26.4■■□□□ 1.82
SEMA3B-205ENST00000434030 DEFB118Q96PH6 123 aa26.4■■□□□ 1.82
SEMA3B-205ENST00000434030 GOPCQ9HD26 462 aa26.4■■□□□ 1.82
SEMA3B-205ENST00000434030 NYAP2Q9P242 653 aa26.4■■□□□ 1.82
SEMA3B-205ENST00000434030 RGS2P41220 211 aa26.39■■□□□ 1.82
SEMA3B-205ENST00000434030 WDR78Q5VTH9 848 aa26.39■■□□□ 1.82
SEMA3B-205ENST00000434030 PLEKHM2Q8IWE5 1019 aa26.39■■□□□ 1.82
SEMA3B-205ENST00000434030 HELLSQ9NRZ9 838 aa26.39■■□□□ 1.82
SEMA3B-205ENST00000434030 RPTORQ8N122 1335 aa26.39■■□□□ 1.81
SEMA3B-205ENST00000434030 IGKV6D-41A0A0C4DH26 115 aa26.38■■□□□ 1.81
SEMA3B-205ENST00000434030 PTPREP23469 700 aa26.38■■□□□ 1.81
SEMA3B-205ENST00000434030 PPARAQ07869 468 aa26.38■■□□□ 1.81
SEMA3B-205ENST00000434030 MAP2K5Q13163 448 aa26.38■■□□□ 1.81
SEMA3B-205ENST00000434030 UBE2Q1Q7Z7E8 422 aa26.38■■□□□ 1.81
SEMA3B-205ENST00000434030 TICAM2Q86XR7 235 aa26.38■■□□□ 1.81
SEMA3B-205ENST00000434030 TRMT44Q8IYL2 757 aaKnown RBP26.38■■□□□ 1.81
SEMA3B-205ENST00000434030 MB21D1Q8N884 522 aa26.38■■□□□ 1.81
SEMA3B-205ENST00000434030 ATG4CQ96DT6 458 aa26.38■■□□□ 1.81
SEMA3B-205ENST00000434030 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.38■■□□□ 1.81
SEMA3B-205ENST00000434030 SLC15A5A6NIM6 579 aa26.37■■□□□ 1.81
SEMA3B-205ENST00000434030 TRIM6-TRIM34B2RNG4 842 aa26.37■■□□□ 1.81
SEMA3B-205ENST00000434030 TFRCP02786 760 aaKnown RBP26.37■■□□□ 1.81
SEMA3B-205ENST00000434030 PDE4BQ07343 736 aa26.37■■□□□ 1.81
SEMA3B-205ENST00000434030 FAM227BQ96M60 508 aa26.37■■□□□ 1.81
SEMA3B-205ENST00000434030 MOV10L1Q9BXT6 1211 aaKnown RBP26.37■■□□□ 1.81
SEMA3B-205ENST00000434030 SPATC1LQ9H0A9 340 aa26.37■■□□□ 1.81
SEMA3B-205ENST00000434030 OSBPL3Q9H4L5 887 aa26.37■■□□□ 1.81
SEMA3B-205ENST00000434030 HMX1Q9NP08 348 aaPredicted RBP26.37■■□□□ 1.81
SEMA3B-205ENST00000434030 RAD21O60216 631 aa26.36■■□□□ 1.81
SEMA3B-205ENST00000434030 SLC3A2P08195 630 aaKnown RBP26.36■■□□□ 1.81
SEMA3B-205ENST00000434030 CCL14Q16627 93 aa26.36■■□□□ 1.81
SEMA3B-205ENST00000434030 VPS53Q5VIR6 699 aa26.36■■□□□ 1.81
SEMA3B-205ENST00000434030 RILPL2Q969X0 211 aa26.36■■□□□ 1.81
SEMA3B-205ENST00000434030 APBA2Q99767 749 aa26.36■■□□□ 1.81
SEMA3B-205ENST00000434030 CRISPLD2Q9H0B8 497 aa26.36■■□□□ 1.81
SEMA3B-205ENST00000434030 CLIP2Q9UDT6 1046 aa26.36■■□□□ 1.81
SEMA3B-205ENST00000434030 ADAMTS5Q9UNA0 930 aa26.36■■□□□ 1.81
SEMA3B-205ENST00000434030 IVNS1ABPQ9Y6Y0 642 aa26.36■■□□□ 1.81
SEMA3B-205ENST00000434030 A0A0D9SFI3 127 aa26.35■■□□□ 1.81
SEMA3B-205ENST00000434030 ZKSCAN1P17029 563 aaPredicted RBP26.35■■□□□ 1.81
SEMA3B-205ENST00000434030 CAPN2P17655 700 aa26.35■■□□□ 1.81
SEMA3B-205ENST00000434030 GRB14Q14449 540 aa26.35■■□□□ 1.81
SEMA3B-205ENST00000434030 MCMDC2Q4G0Z9 681 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms