RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 AMPD2Q01433 879 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 MSL1Q68DK7 614 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 FMR1NBQ8N0W7 255 aaPredicted RBP9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 C1orf131Q8NDD1 294 aaKnown RBP9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 AENQ8WTP8 325 aaKnown RBP9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 ARPC5LQ9BPX5 153 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 IL25Q9H293 177 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 UNC45AQ9H3U1 944 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 CWC25Q9NXE8 425 aaPredicted RBP9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 WDR37Q9Y2I8 494 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 EID1Q9Y6B2 187 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 NWD1Q149M9 1564 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 ARHGEF10O15013 1369 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 MAP4K4O95819 1239 aaPredicted RBP9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 CSB-PGBD3P0DP91 1061 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 SGSM1Q2NKQ1 1148 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 Q4G0T1 1027 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 NBPF14Q5TI25 921 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 MCM10Q7L590 875 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 ARMC9Q7Z3E5 817 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 NECAB1Q8N987 351 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 LZICQ8WZA0 190 aa9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 ALDH8A1Q9H2A2 487 aaPredicted RBP9.91□□□□□ -0.82
CDC42BPA-206ENST00000429440 ATP1A3P13637 1013 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 ALADP13716 330 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 DESP17661 470 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 EIF4BP23588 611 aaKnown RBP9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 KIF5BP33176 963 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 PSMC4P43686 418 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 MRPS35P82673 323 aaKnown RBP9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 HDLBPQ00341 1268 aaKnown RBP9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 APBA1Q02410 837 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 ANKRD1Q15327 319 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 PPP4R3AQ6IN85 833 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 CCDC80Q76M96 950 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 LCA5Q86VQ0 697 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 DPF2Q92785 391 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 PANX2Q96RD6 677 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 FANCLQ9NW38 375 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 UTP6Q9NYH9 597 aaKnown RBP9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 CEP126Q9P2H0 1117 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 LRRC37A3O60309 1634 aa9.9□□□□□ -0.82
CDC42BPA-206ENST00000429440 A0A1B0GVG6 124 aa9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 OPLAHO14841 1288 aa9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 NAT1P18440 290 aa9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 ADD1P35611 737 aaKnown RBP9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 INHBCP55103 352 aa9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 RASGRP2Q7LDG7 609 aa9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 FSIP1Q8NA03 581 aa9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 SMYD1Q8NB12 490 aa9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 CYFIP2Q96F07 1278 aa9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 OSBPL1AQ9BXW6 950 aa9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 TSPYL2Q9H2G4 693 aaPredicted RBP9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 MIS18AQ9NYP9 233 aa9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 ATXN10Q9UBB4 475 aa9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 TMCO1Q9UM00 188 aa9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 TTF2Q9UNY4 1162 aaKnown RBP9.9□□□□□ -0.83
CDC42BPA-206ENST00000429440 SBNO1A3KN83 1393 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 FLT4P35916 1363 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 A0A1W2PQ27 194 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 A0A1W2PQ64 194 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 A0A1W2PQD8 194 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 DPPA5A6NC42 116 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 FOXO3O43524 673 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 CCND1P24385 295 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 YY1P25490 414 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 MDH1P40925 334 aaKnown RBP9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 ABL2P42684 1182 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 MYL5Q02045 173 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 MTX1Q13505 466 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 TTMPQ5BVD1 217 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 SPECC1LQ69YQ0 1117 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 SYCP3Q8IZU3 236 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 SLC35F6Q8N357 371 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 DESI2Q9BSY9 194 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 LZTFL1Q9NQ48 299 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 TRPV5Q9NQA5 729 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 PCMTD2Q9NV79 361 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 TMOD4Q9NZQ9 345 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 TMEM98Q9Y2Y6 226 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 C2CD2Q9Y426 696 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 CEMIPQ8WUJ3 1361 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 IGSF1Q8N6C5 1336 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 CFAP73A6NFT4 308 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 TMEM221A6NGB7 291 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 PPIP5K2O43314 1243 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 GSTA1P08263 222 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 VIL1P09327 827 aaKnown RBP9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 KCNA6P17658 529 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 MXRA7P84157 204 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 GOLGA8FQ08AF8 430 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 GOLGA8DPQ0D2H9 430 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 ZNF268Q14587 947 aaPredicted RBP9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 ENOX2Q16206 610 aaKnown RBP9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 SLC4A8Q2Y0W8 1093 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 AKNAD1Q5T1N1 836 aa9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 RNF168Q8IYW5 571 aaPredicted RBP9.89□□□□□ -0.83
CDC42BPA-206ENST00000429440 MAIP1Q8WWC4 291 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms