RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 VPS37CA5D8V6 355 aaPredicted RBP10.35□□□□□ -0.75
SMC6-204ENST00000428868 USP17L5A8MUK1 530 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 PHF20L1A8MW92 1017 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 CPLX1O14810 134 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 STX6O43752 255 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 TBC1D12O60347 775 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 POTEIP0CG38 1075 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 POTEJP0CG39 1038 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 GOLGA8HP0CJ92 632 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 TOP1P11387 765 aaKnown RBP10.35□□□□□ -0.75
SMC6-204ENST00000428868 EEF2P13639 858 aaKnown RBP10.35□□□□□ -0.75
SMC6-204ENST00000428868 EPHX2P34913 555 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 NT5C2P49902 561 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 RCAN1P53805 252 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 ATP2B2Q01814 1243 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 MAP3K10Q02779 954 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 TNFAIP1Q13829 316 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 LARP1BQ659C4 914 aaKnown RBP10.35□□□□□ -0.75
SMC6-204ENST00000428868 SYNE3Q6ZMZ3 975 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 TMTC3Q6ZXV5 915 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 APOBEC3FQ8IUX4 373 aaKnown RBP10.35□□□□□ -0.75
SMC6-204ENST00000428868 CCDC17Q96LX7 622 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 SLC26A6Q9BXS9 759 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 GLIS2Q9BZE0 524 aaPredicted RBP10.35□□□□□ -0.75
SMC6-204ENST00000428868 CLIP2Q9UDT6 1046 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 ZBTB21Q9ULJ3 1066 aa10.35□□□□□ -0.75
SMC6-204ENST00000428868 FRMPD2Q68DX3 1309 aaPredicted RBP10.34□□□□□ -0.75
SMC6-204ENST00000428868 A0A1W2PRG0 241 aa10.34□□□□□ -0.75
SMC6-204ENST00000428868 FMNL1O95466 1100 aaPredicted RBP10.34□□□□□ -0.75
SMC6-204ENST00000428868 VEGFAP15692 232 aaPredicted RBP10.34□□□□□ -0.75
SMC6-204ENST00000428868 IFNAR1P17181 557 aa10.34□□□□□ -0.75
SMC6-204ENST00000428868 INPP5BP32019 993 aa10.34□□□□□ -0.75
SMC6-204ENST00000428868 NUCB2P80303 420 aa10.34□□□□□ -0.75
SMC6-204ENST00000428868 HMGN5P82970 282 aaKnown RBP10.34□□□□□ -0.75
SMC6-204ENST00000428868 ICA1Q05084 483 aa10.34□□□□□ -0.75
SMC6-204ENST00000428868 FOXD4L6Q3SYB3 417 aaPredicted RBP10.34□□□□□ -0.75
SMC6-204ENST00000428868 CCDC178Q5BJE1 867 aa10.34□□□□□ -0.75
SMC6-204ENST00000428868 KIAA1755Q5JYT7 1200 aa10.34□□□□□ -0.75
SMC6-204ENST00000428868 DPY19L2Q6NUT2 758 aa10.34□□□□□ -0.75
SMC6-204ENST00000428868 USP17L2Q6R6M4 530 aa10.34□□□□□ -0.75
SMC6-204ENST00000428868 FOXD4L3Q6VB84 417 aaPredicted RBP10.34□□□□□ -0.75
SMC6-204ENST00000428868 TMEM179Q6ZVK1 233 aa10.34□□□□□ -0.75
SMC6-204ENST00000428868 FERMT3Q86UX7 667 aa10.34□□□□□ -0.75
SMC6-204ENST00000428868 ACER1Q8TDN7 264 aa10.34□□□□□ -0.75
SMC6-204ENST00000428868 PITPNM2Q9BZ72 1349 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 STK36Q9NRP7 1315 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 PALM3A6NDB9 673 aaPredicted RBP10.33□□□□□ -0.76
SMC6-204ENST00000428868 CYTH3O43739 400 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 CAPN15O75808 1086 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 TTLL1O95922 423 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 F13A1P00488 732 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 ZSCAN22P10073 491 aaPredicted RBP10.33□□□□□ -0.76
SMC6-204ENST00000428868 PDHBP11177 359 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 CAP2P40123 477 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 ECE1P42892 770 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 APLP1P51693 650 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 SSRP1Q08945 709 aaKnown RBP10.33□□□□□ -0.76
SMC6-204ENST00000428868 DGKZQ13574 1117 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 PKN1Q16512 942 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 FAM173BQ6P4H8 233 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 FAM184AQ8NB25 1140 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 CTCFLQ8NI51 663 aaPredicted RBP10.33□□□□□ -0.76
SMC6-204ENST00000428868 PIBF1Q8WXW3 757 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 TAF1DQ9H5J8 278 aaPredicted RBP10.33□□□□□ -0.76
SMC6-204ENST00000428868 NYAP2Q9P242 653 aa10.33□□□□□ -0.76
SMC6-204ENST00000428868 KIF28PB7ZC32 967 aa10.32□□□□□ -0.76
SMC6-204ENST00000428868 ADAMTS3O15072 1205 aa10.32□□□□□ -0.76
SMC6-204ENST00000428868 CALM1P0DP23 149 aa10.32□□□□□ -0.76
SMC6-204ENST00000428868 CALM2P0DP24 149 aa10.32□□□□□ -0.76
SMC6-204ENST00000428868 CALM3P0DP25 149 aa10.32□□□□□ -0.76
SMC6-204ENST00000428868 SNHG28P0DPA3 235 aa10.32□□□□□ -0.76
SMC6-204ENST00000428868 FMR1Q06787 632 aaKnown RBP eCLIP10.32□□□□□ -0.761e-6■■■■□ 21.4
SMC6-204ENST00000428868 RESTQ13127 1097 aa10.32□□□□□ -0.76
SMC6-204ENST00000428868 PRKG1Q13976 671 aa10.32□□□□□ -0.76
SMC6-204ENST00000428868 NFKBIBQ15653 356 aa10.32□□□□□ -0.76
SMC6-204ENST00000428868 EAPPQ56P03 285 aaPredicted RBP10.32□□□□□ -0.76
SMC6-204ENST00000428868 TTBK2Q6IQ55 1244 aa10.32□□□□□ -0.76
SMC6-204ENST00000428868 USP50Q70EL3 339 aaPredicted RBP10.32□□□□□ -0.76
SMC6-204ENST00000428868 DNAJC5GQ8N7S2 189 aa10.32□□□□□ -0.76
SMC6-204ENST00000428868 NUP88Q99567 741 aaPredicted RBP10.32□□□□□ -0.76
SMC6-204ENST00000428868 ALG1Q9BT22 464 aa10.32□□□□□ -0.76
SMC6-204ENST00000428868 KANSL2Q9H9L4 492 aa10.32□□□□□ -0.76
SMC6-204ENST00000428868 GPCPD1Q9NPB8 672 aa10.32□□□□□ -0.76
SMC6-204ENST00000428868 RBM28Q9NW13 759 aaKnown RBP10.32□□□□□ -0.76
SMC6-204ENST00000428868 WDR33Q9C0J8 1336 aaKnown RBP10.32□□□□□ -0.76
SMC6-204ENST00000428868 LCTP09848 1927 aa10.31□□□□□ -0.76
SMC6-204ENST00000428868 A0A0G2JMZ2 1700 aa10.31□□□□□ -0.76
SMC6-204ENST00000428868 KIF3CO14782 793 aa10.31□□□□□ -0.76
SMC6-204ENST00000428868 DHX16O60231 1041 aaKnown RBP10.31□□□□□ -0.76
SMC6-204ENST00000428868 CDKL5O76039 1030 aa10.31□□□□□ -0.76
SMC6-204ENST00000428868 BAG4O95429 457 aaKnown RBP10.31□□□□□ -0.76
SMC6-204ENST00000428868 PARP1P09874 1014 aaKnown RBP10.31□□□□□ -0.76
SMC6-204ENST00000428868 ZNF543Q08ER8 600 aa10.31□□□□□ -0.76
SMC6-204ENST00000428868 KCTD1Q719H9 257 aa10.31□□□□□ -0.76
SMC6-204ENST00000428868 USP48Q86UV5 1035 aa10.31□□□□□ -0.76
SMC6-204ENST00000428868 ZKSCAN4Q969J2 545 aaPredicted RBP10.31□□□□□ -0.76
SMC6-204ENST00000428868 MKL1Q969V6 931 aa10.31□□□□□ -0.76
SMC6-204ENST00000428868 C8orf76Q96K31 380 aa10.31□□□□□ -0.76
SMC6-204ENST00000428868 MAP3K14Q99558 947 aa10.31□□□□□ -0.76
SMC6-204ENST00000428868 RNF26Q9BY78 433 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms