RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 ABCB5Q2M3G0 1257 aa10.59□□□□□ -0.71
LINC00963-204ENST00000427778 SHROOM1Q2M3G4 852 aaPredicted RBP10.59□□□□□ -0.71
LINC00963-204ENST00000427778 ZMYM1Q5SVZ6 1142 aa10.59□□□□□ -0.71
LINC00963-204ENST00000427778 GADL1Q6ZQY3 521 aa10.59□□□□□ -0.71
LINC00963-204ENST00000427778 AMOTL1Q8IY63 956 aa10.59□□□□□ -0.71
LINC00963-204ENST00000427778 EVI5LQ96CN4 794 aa10.59□□□□□ -0.71
LINC00963-204ENST00000427778 C12orf42Q96LP6 360 aa10.59□□□□□ -0.71
LINC00963-204ENST00000427778 FSD1Q9BTV5 496 aa10.59□□□□□ -0.71
LINC00963-204ENST00000427778 LNPKQ9C0E8 428 aa10.59□□□□□ -0.71
LINC00963-204ENST00000427778 PRO3102Q9H379 93 aa10.59□□□□□ -0.71
LINC00963-204ENST00000427778 PNMA3Q9UL41 463 aa10.59□□□□□ -0.71
LINC00963-204ENST00000427778 SLC4A4Q9Y6R1 1079 aa10.59□□□□□ -0.71
LINC00963-204ENST00000427778 A0A1W2PPC1 479 aa10.58□□□□□ -0.72
LINC00963-204ENST00000427778 USP17L12C9JPN9 530 aa10.58□□□□□ -0.72
LINC00963-204ENST00000427778 USP17L21D6R901 530 aa10.58□□□□□ -0.72
LINC00963-204ENST00000427778 CYP2D6P10635 497 aa10.58□□□□□ -0.72
LINC00963-204ENST00000427778 HOXA7P31268 230 aaPredicted RBP10.58□□□□□ -0.72
LINC00963-204ENST00000427778 GUCY1A2P33402 732 aa10.58□□□□□ -0.72
LINC00963-204ENST00000427778 MTMR2Q13614 643 aa10.58□□□□□ -0.72
LINC00963-204ENST00000427778 TREML2Q5T2D2 321 aa10.58□□□□□ -0.72
LINC00963-204ENST00000427778 CTR9Q6PD62 1173 aa10.58□□□□□ -0.72
LINC00963-204ENST00000427778 C16orf86Q6ZW13 317 aa10.58□□□□□ -0.72
LINC00963-204ENST00000427778 CCDC17Q96LX7 622 aa10.58□□□□□ -0.72
LINC00963-204ENST00000427778 KIAA1683Q9H0B3 1180 aa10.58□□□□□ -0.72
LINC00963-204ENST00000427778 MYH4Q9Y623 1939 aa10.58□□□□□ -0.72
LINC00963-204ENST00000427778 LAMA4Q16363 1823 aa10.58□□□□□ -0.72
LINC00963-204ENST00000427778 A0A0G2JMZ2 1700 aa10.58□□□□□ -0.72
LINC00963-204ENST00000427778 M0R2C6 588 aa10.57□□□□□ -0.72
LINC00963-204ENST00000427778 SOX1O00570 391 aaPredicted RBP10.57□□□□□ -0.72
LINC00963-204ENST00000427778 CYP2C8P10632 490 aa10.57□□□□□ -0.72
LINC00963-204ENST00000427778 GCLCP48506 637 aaPredicted RBP10.57□□□□□ -0.72
LINC00963-204ENST00000427778 PRMT2P55345 433 aa10.57□□□□□ -0.72
LINC00963-204ENST00000427778 FAM110CQ1W6H9 321 aa10.57□□□□□ -0.72
LINC00963-204ENST00000427778 TMEM179Q6ZVK1 233 aa10.57□□□□□ -0.72
LINC00963-204ENST00000427778 PLEKHM2Q8IWE5 1019 aa10.57□□□□□ -0.72
LINC00963-204ENST00000427778 SLC44A5Q8NCS7 719 aa10.57□□□□□ -0.72
LINC00963-204ENST00000427778 SH3TC2Q8TF17 1288 aa10.57□□□□□ -0.72
LINC00963-204ENST00000427778 SHISA4Q96DD7 197 aa10.57□□□□□ -0.72
LINC00963-204ENST00000427778 LRCH3Q96II8 777 aa10.57□□□□□ -0.72
LINC00963-204ENST00000427778 HTATIP2Q9BUP3 242 aa10.57□□□□□ -0.72
LINC00963-204ENST00000427778 EPB41L4AQ9HCS5 686 aaPredicted RBP10.57□□□□□ -0.72
LINC00963-204ENST00000427778 CABP5Q9NP86 173 aa10.57□□□□□ -0.72
LINC00963-204ENST00000427778 TMOD4Q9NZQ9 345 aa10.57□□□□□ -0.72
LINC00963-204ENST00000427778 CPA4Q9UI42 421 aa10.57□□□□□ -0.72
LINC00963-204ENST00000427778 CYP2D7A0A087X1C5 515 aa10.56□□□□□ -0.72
LINC00963-204ENST00000427778 CDK8P49336 464 aa10.56□□□□□ -0.72
LINC00963-204ENST00000427778 USP14P54578 494 aa10.56□□□□□ -0.72
LINC00963-204ENST00000427778 KIF22Q14807 665 aa10.56□□□□□ -0.72
LINC00963-204ENST00000427778 USP17L2Q6R6M4 530 aa10.56□□□□□ -0.72
LINC00963-204ENST00000427778 SMCR8Q8TEV9 937 aaPredicted RBP10.56□□□□□ -0.72
LINC00963-204ENST00000427778 ASCC2Q9H1I8 757 aaPredicted RBP10.56□□□□□ -0.72
LINC00963-204ENST00000427778 EMILIN3Q9NT22 766 aa10.56□□□□□ -0.72
LINC00963-204ENST00000427778 PLXNB2O15031 1838 aa10.56□□□□□ -0.72
LINC00963-204ENST00000427778 PATL2C9JE40 543 aaKnown RBP10.55□□□□□ -0.72
LINC00963-204ENST00000427778 FOXP2O15409 715 aa10.55□□□□□ -0.72
LINC00963-204ENST00000427778 CTGFP29279 349 aa10.55□□□□□ -0.72
LINC00963-204ENST00000427778 SEPT2Q15019 361 aa10.55□□□□□ -0.72
LINC00963-204ENST00000427778 RAB3GAP1Q15042 981 aa10.55□□□□□ -0.72
LINC00963-204ENST00000427778 B4GALNT3Q6L9W6 998 aa10.55□□□□□ -0.72
LINC00963-204ENST00000427778 GTF3C2Q8WUA4 911 aaPredicted RBP10.55□□□□□ -0.72
LINC00963-204ENST00000427778 DYNLL2Q96FJ2 89 aa10.55□□□□□ -0.72
LINC00963-204ENST00000427778 TRIM47Q96LD4 638 aa10.55□□□□□ -0.72
LINC00963-204ENST00000427778 SEC62Q99442 399 aaKnown RBP10.55□□□□□ -0.72
LINC00963-204ENST00000427778 NACAP1Q9BZK3 213 aa10.55□□□□□ -0.72
LINC00963-204ENST00000427778 ARHGAP39Q9C0H5 1083 aa10.55□□□□□ -0.72
LINC00963-204ENST00000427778 HELLSQ9NRZ9 838 aa10.55□□□□□ -0.72
LINC00963-204ENST00000427778 MORF4L1Q9UBU8 362 aa10.55□□□□□ -0.72
LINC00963-204ENST00000427778 NR2E3Q9Y5X4 410 aa10.55□□□□□ -0.72
LINC00963-204ENST00000427778 ZMYM6O95789 1325 aa10.55□□□□□ -0.72
LINC00963-204ENST00000427778 PLIN4Q96Q06 1357 aa10.54□□□□□ -0.72
LINC00963-204ENST00000427778 SMIM22K7EJ46 135 aa10.54□□□□□ -0.72
LINC00963-204ENST00000427778 VCANP13611 3396 aa10.54□□□□□ -0.72
LINC00963-204ENST00000427778 AKR1B1P15121 316 aa10.54□□□□□ -0.72
LINC00963-204ENST00000427778 VCAM1P19320 739 aa10.54□□□□□ -0.72
LINC00963-204ENST00000427778 OSBPP22059 807 aa10.54□□□□□ -0.72
LINC00963-204ENST00000427778 PSMC4P43686 418 aa10.54□□□□□ -0.72
LINC00963-204ENST00000427778 FCGRTP55899 365 aa10.54□□□□□ -0.72
LINC00963-204ENST00000427778 IRX3P78415 501 aaPredicted RBP10.54□□□□□ -0.72
LINC00963-204ENST00000427778 LBX2Q6XYB7 198 aa10.54□□□□□ -0.72
LINC00963-204ENST00000427778 IFNL3Q8IZI9 196 aa10.54□□□□□ -0.72
LINC00963-204ENST00000427778 ACER1Q8TDN7 264 aa10.54□□□□□ -0.72
LINC00963-204ENST00000427778 FEZ1Q99689 392 aa10.54□□□□□ -0.72
LINC00963-204ENST00000427778 COL25A1Q9BXS0 654 aaPredicted RBP10.54□□□□□ -0.72
LINC00963-204ENST00000427778 ZNF287Q9HBT7 754 aa10.54□□□□□ -0.72
LINC00963-204ENST00000427778 SRRDQ9UH36 339 aa10.54□□□□□ -0.72
LINC00963-204ENST00000427778 A0A1W2PRG0 241 aa10.53□□□□□ -0.72
LINC00963-204ENST00000427778 RASA1P20936 1047 aa10.53□□□□□ -0.72
LINC00963-204ENST00000427778 HOXD10P28358 340 aa10.53□□□□□ -0.72
LINC00963-204ENST00000427778 TDO2P48775 406 aa10.53□□□□□ -0.72
LINC00963-204ENST00000427778 HERVK_113P62684 666 aa10.53□□□□□ -0.72
LINC00963-204ENST00000427778 IRX6P78412 446 aaPredicted RBP10.53□□□□□ -0.72
LINC00963-204ENST00000427778 ICA1Q05084 483 aa10.53□□□□□ -0.72
LINC00963-204ENST00000427778 ALX1Q15699 326 aa10.53□□□□□ -0.72
LINC00963-204ENST00000427778 MCMDC2Q4G0Z9 681 aa10.53□□□□□ -0.72
LINC00963-204ENST00000427778 SIAH1Q8IUQ4 282 aa10.53□□□□□ -0.72
LINC00963-204ENST00000427778 NKX2-3Q8TAU0 364 aa10.53□□□□□ -0.72
LINC00963-204ENST00000427778 LPAR1Q92633 364 aa10.53□□□□□ -0.72
LINC00963-204ENST00000427778 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC00963-204ENST00000427778 SH2D4AQ9H788 454 aa10.53□□□□□ -0.72
LINC00963-204ENST00000427778 KANSL2Q9H9L4 492 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms