RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 USP17L11C9JVI0 530 aa29.74■■■□□ 2.35
HERPUD2-205ENST00000427455 USP17L18D6R9N7 530 aa29.74■■■□□ 2.35
HERPUD2-205ENST00000427455 USP17L22D6RA61 530 aa29.74■■■□□ 2.35
HERPUD2-205ENST00000427455 USP17L17D6RBQ6 530 aa29.74■■■□□ 2.35
HERPUD2-205ENST00000427455 USP17L19D6RCP7 530 aa29.74■■■□□ 2.35
HERPUD2-205ENST00000427455 USP17L20D6RJB6 530 aa29.74■■■□□ 2.35
HERPUD2-205ENST00000427455 USP17L24Q0WX57 530 aa29.74■■■□□ 2.35
HERPUD2-205ENST00000427455 MAP4K1Q92918 833 aa29.74■■■□□ 2.35
HERPUD2-205ENST00000427455 ERO1AQ96HE7 468 aa29.74■■■□□ 2.35
HERPUD2-205ENST00000427455 RPAP3Q9H6T3 665 aaPredicted RBP29.74■■■□□ 2.35
HERPUD2-205ENST00000427455 SYNPO2Q9UMS6 1093 aa29.74■■■□□ 2.35
HERPUD2-205ENST00000427455 BCRP11274 1271 aa29.73■■■□□ 2.35
HERPUD2-205ENST00000427455 LSG1Q9H089 658 aaKnown RBP29.73■■■□□ 2.35
HERPUD2-205ENST00000427455 CLIP2Q9UDT6 1046 aa29.73■■■□□ 2.35
HERPUD2-205ENST00000427455 GCLCP48506 637 aaPredicted RBP29.72■■■□□ 2.35
HERPUD2-205ENST00000427455 KIAA1755Q5JYT7 1200 aa29.72■■■□□ 2.35
HERPUD2-205ENST00000427455 ESR2Q92731 530 aa29.72■■■□□ 2.35
HERPUD2-205ENST00000427455 MKL1Q969V6 931 aa29.72■■■□□ 2.35
HERPUD2-205ENST00000427455 ANO2Q9NQ90 1003 aa29.72■■■□□ 2.35
HERPUD2-205ENST00000427455 WDR46O15213 610 aaKnown RBP29.71■■■□□ 2.35
HERPUD2-205ENST00000427455 HERVK_113P62684 666 aa29.71■■■□□ 2.35
HERPUD2-205ENST00000427455 CATSPERGQ6ZRH7 1159 aa29.71■■■□□ 2.35
HERPUD2-205ENST00000427455 SPICE1Q8N0Z3 855 aa29.71■■■□□ 2.35
HERPUD2-205ENST00000427455 CD99L2Q8TCZ2 262 aa29.71■■■□□ 2.35
HERPUD2-205ENST00000427455 IL17RBQ9NRM6 502 aa29.71■■■□□ 2.35
HERPUD2-205ENST00000427455 RBM8AQ9Y5S9 174 aaKnown RBP29.71■■■□□ 2.35
HERPUD2-205ENST00000427455 CYP21A2P08686 494 aa29.7■■■□□ 2.35
HERPUD2-205ENST00000427455 CTU1Q7Z7A3 348 aaKnown RBP29.7■■■□□ 2.35
HERPUD2-205ENST00000427455 GTF3C2Q8WUA4 911 aaPredicted RBP29.7■■■□□ 2.35
HERPUD2-205ENST00000427455 P2RX7Q99572 595 aaKnown RBP29.7■■■□□ 2.35
HERPUD2-205ENST00000427455 TANGO6Q9C0B7 1094 aa29.7■■■□□ 2.35
HERPUD2-205ENST00000427455 CNNM2Q9H8M5 875 aa29.7■■■□□ 2.35
HERPUD2-205ENST00000427455 TCP11L1Q9NUJ3 509 aa29.7■■■□□ 2.35
HERPUD2-205ENST00000427455 STX8Q9UNK0 236 aa29.7■■■□□ 2.35
HERPUD2-205ENST00000427455 NMT2O60551 498 aa29.69■■■□□ 2.34
HERPUD2-205ENST00000427455 LACTBP83111 547 aaPredicted RBP29.69■■■□□ 2.34
HERPUD2-205ENST00000427455 FAM110CQ1W6H9 321 aa29.69■■■□□ 2.34
HERPUD2-205ENST00000427455 LRRC47Q8N1G4 583 aaKnown RBP29.69■■■□□ 2.34
HERPUD2-205ENST00000427455 RAD21O60216 631 aa29.68■■■□□ 2.34
HERPUD2-205ENST00000427455 NOVP48745 357 aa29.68■■■□□ 2.34
HERPUD2-205ENST00000427455 KRT23Q9C075 422 aa29.68■■■□□ 2.34
HERPUD2-205ENST00000427455 F5H6K3 240 aa29.67■■■□□ 2.34
HERPUD2-205ENST00000427455 KDM4AO75164 1064 aa29.67■■■□□ 2.34
HERPUD2-205ENST00000427455 KLRC3Q07444 240 aa29.67■■■□□ 2.34
HERPUD2-205ENST00000427455 KIF22Q14807 665 aa29.67■■■□□ 2.34
HERPUD2-205ENST00000427455 ANKRD13CQ8N6S4 541 aa29.67■■■□□ 2.34
HERPUD2-205ENST00000427455 GMCL1P1Q8NEA9 526 aa29.67■■■□□ 2.34
HERPUD2-205ENST00000427455 B4E1Z4 1266 aa29.66■■■□□ 2.34
HERPUD2-205ENST00000427455 NDUFB10O96000 172 aa29.66■■■□□ 2.34
HERPUD2-205ENST00000427455 ARHGEF6Q15052 776 aa29.66■■■□□ 2.34
HERPUD2-205ENST00000427455 NKX2-3Q8TAU0 364 aa29.66■■■□□ 2.34
HERPUD2-205ENST00000427455 LBX2Q6XYB7 198 aa29.65■■■□□ 2.34
HERPUD2-205ENST00000427455 MORF4L1Q9UBU8 362 aa29.65■■■□□ 2.34
HERPUD2-205ENST00000427455 ZSWIM8A7E2V4 1837 aa29.64■■■□□ 2.34
HERPUD2-205ENST00000427455 PARP14Q460N5 1801 aa29.64■■■□□ 2.34
HERPUD2-205ENST00000427455 SPDYE16A6NNV3 312 aaPredicted RBP29.64■■■□□ 2.34
HERPUD2-205ENST00000427455 TRDNQ13061 729 aa29.64■■■□□ 2.34
HERPUD2-205ENST00000427455 COG2Q14746 738 aa29.64■■■□□ 2.34
HERPUD2-205ENST00000427455 FAM83BQ5T0W9 1011 aa29.64■■■□□ 2.34
HERPUD2-205ENST00000427455 IQCA1Q86XH1 822 aa29.64■■■□□ 2.34
HERPUD2-205ENST00000427455 EFCC1Q9HA90 598 aa29.64■■■□□ 2.34
HERPUD2-205ENST00000427455 RLFQ13129 1914 aa29.64■■■□□ 2.34
HERPUD2-205ENST00000427455 A0A0G2JMZ2 1700 aa29.64■■■□□ 2.34
HERPUD2-205ENST00000427455 MYPNQ86TC9 1320 aa29.64■■■□□ 2.34
HERPUD2-205ENST00000427455 FLOT1O75955 427 aa29.63■■■□□ 2.33
HERPUD2-205ENST00000427455 CAP1Q01518 475 aa29.63■■■□□ 2.33
HERPUD2-205ENST00000427455 OTOP1Q7RTM1 612 aa29.63■■■□□ 2.33
HERPUD2-205ENST00000427455 HOXC10Q9NYD6 342 aa29.63■■■□□ 2.33
HERPUD2-205ENST00000427455 TRIM17Q9Y577 477 aa29.63■■■□□ 2.33
HERPUD2-205ENST00000427455 E7EWF7 191 aa29.62■■■□□ 2.33
HERPUD2-205ENST00000427455 PKN2Q16513 984 aaKnown RBP29.62■■■□□ 2.33
HERPUD2-205ENST00000427455 CCDC178Q5BJE1 867 aa29.62■■■□□ 2.33
HERPUD2-205ENST00000427455 TNS4Q8IZW8 715 aa29.62■■■□□ 2.33
HERPUD2-205ENST00000427455 TTC14Q96N46 770 aa29.62■■■□□ 2.33
HERPUD2-205ENST00000427455 ARHGAP39Q9C0H5 1083 aa29.62■■■□□ 2.33
HERPUD2-205ENST00000427455 TAF6LQ9Y6J9 622 aa29.62■■■□□ 2.33
HERPUD2-205ENST00000427455 GNRH1P01148 92 aa29.61■■■□□ 2.33
HERPUD2-205ENST00000427455 TOP1P11387 765 aaKnown RBP29.61■■■□□ 2.33
HERPUD2-205ENST00000427455 NECTIN1Q15223 517 aa29.61■■■□□ 2.33
HERPUD2-205ENST00000427455 SLFN13Q68D06 897 aa29.61■■■□□ 2.33
HERPUD2-205ENST00000427455 RALYLQ86SE5 291 aaKnown RBP29.61■■■□□ 2.33
HERPUD2-205ENST00000427455 NUP88Q99567 741 aaPredicted RBP29.61■■■□□ 2.33
HERPUD2-205ENST00000427455 PAGR1Q9BTK6 254 aa29.61■■■□□ 2.33
HERPUD2-205ENST00000427455 MCOLN1Q9GZU1 580 aa29.61■■■□□ 2.33
HERPUD2-205ENST00000427455 TXNRD2Q9NNW7 524 aa29.61■■■□□ 2.33
HERPUD2-205ENST00000427455 ZSWIM5Q9P217 1185 aa29.61■■■□□ 2.33
HERPUD2-205ENST00000427455 RBPJLQ9UBG7 517 aa29.61■■■□□ 2.33
HERPUD2-205ENST00000427455 RABGAP1Q9Y3P9 1069 aa29.61■■■□□ 2.33
HERPUD2-205ENST00000427455 MGAMO43451 1857 aa29.61■■■□□ 2.33
HERPUD2-205ENST00000427455 SLC27A2O14975 620 aa29.6■■■□□ 2.33
HERPUD2-205ENST00000427455 DSG3P32926 999 aa29.6■■■□□ 2.33
HERPUD2-205ENST00000427455 PSMC4P43686 418 aa29.6■■■□□ 2.33
HERPUD2-205ENST00000427455 FCGRTP55899 365 aa29.6■■■□□ 2.33
HERPUD2-205ENST00000427455 ERVK-9P63128 1117 aa29.6■■■□□ 2.33
HERPUD2-205ENST00000427455 ERVK-24P63145 666 aa29.6■■■□□ 2.33
HERPUD2-205ENST00000427455 CREB3L3Q68CJ9 461 aa29.6■■■□□ 2.33
HERPUD2-205ENST00000427455 RCSD1Q6JBY9 416 aa29.6■■■□□ 2.33
HERPUD2-205ENST00000427455 POTEEQ6S8J3 1075 aa29.6■■■□□ 2.33
HERPUD2-205ENST00000427455 STOX1Q6ZVD7 989 aa29.6■■■□□ 2.33
HERPUD2-205ENST00000427455 GPRC5AQ8NFJ5 357 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms