RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 CARMIL2Q6F5E8 1435 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 CCT6BQ92526 530 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 RSPH10B2B2RC85 870 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 TSC22D2O75157 780 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 S100A6P06703 90 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 RSPH10BP0C881 870 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 SF3A3Q12874 501 aaKnown RBP eCLIP8.56□□□□□ -1.04
LINC00649-203ENST00000427447 MYBPC2Q14324 1141 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 DGKKQ5KSL6 1271 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 SH3BP5LQ7L8J4 393 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 TMTC2Q8N394 836 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 LCA5LO95447 670 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 PDHA1P08559 390 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 RASGRF1Q13972 1273 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 GABPB2Q8TAK5 448 aaPredicted RBP8.56□□□□□ -1.04
LINC00649-203ENST00000427447 TXNDC16Q9P2K2 825 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 MID2Q9UJV3 735 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 HYOU1Q9Y4L1 999 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 MECOMQ03112 1051 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 SEPT1Q8WYJ6 367 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 CCDC151A5D8V7 595 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 TRIM64A6NGJ6 449 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 TRIM64BA6NI03 449 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 BAIAP3O94812 1187 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 AMPHP49418 695 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 FAAH2Q6GMR7 532 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 SMC5Q8IY18 1101 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 KCNK9Q9NPC2 374 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 ST7Q9NRC1 585 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 PCDHGA3Q9Y5H0 932 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 CCDC78A2IDD5 438 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 ARL1P40616 181 aaPredicted RBP8.56□□□□□ -1.04
LINC00649-203ENST00000427447 KLC3Q6P597 504 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 B4GALNT2Q8NHY0 566 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 PAGR1Q9BTK6 254 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 PHAXQ9H814 394 aaKnown RBP8.56□□□□□ -1.04
LINC00649-203ENST00000427447 VCPKMTQ9H867 229 aa8.56□□□□□ -1.04
LINC00649-203ENST00000427447 GSTA2P09210 222 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 PARP1P09874 1014 aaKnown RBP8.55□□□□□ -1.04
LINC00649-203ENST00000427447 NOP2P46087 812 aaKnown RBP8.55□□□□□ -1.04
LINC00649-203ENST00000427447 CCT7Q99832 543 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 CLSTN2Q9H4D0 955 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 TMOD3Q9NYL9 352 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 ERICH3Q5RHP9 1530 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 LAMC2Q13753 1193 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 TMIEQ8NEW7 156 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 CHAMP1Q96JM3 812 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 GTPBP10A4D1E9 387 aaKnown RBP8.55□□□□□ -1.04
LINC00649-203ENST00000427447 MYO1BO43795 1136 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 SLC20A2Q08357 652 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 NUGGCQ68CJ6 796 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 RFT1Q96AA3 541 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 S100PBPQ96BU1 408 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 PACSIN2Q9UNF0 486 aaPredicted RBP8.55□□□□□ -1.04
LINC00649-203ENST00000427447 PPP2R5EQ16537 467 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 CCDC153Q494R4 210 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 HS2ST1Q7LGA3 356 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 RTL3Q8N8U3 475 aaKnown RBP8.55□□□□□ -1.04
LINC00649-203ENST00000427447 TTC4O95801 387 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 CHMP4BP1P59074 171 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 TFAP4Q01664 338 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 UBXN1Q04323 297 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 DRP2Q13474 957 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 SYCP2LQ5T4T6 812 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 ERICH5Q6P6B1 374 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 DDHD1Q8NEL9 900 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 TNIP3Q96KP6 325 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 RHBDL2Q9NX52 303 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 GOLGA8SH3BPF8 625 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 Q4G0T1 1027 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 GGT6Q6P531 493 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 RSRC2Q7L4I2 434 aaKnown RBP8.55□□□□□ -1.04
LINC00649-203ENST00000427447 OTUD6AQ7L8S5 288 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 ATAD3AQ9NVI7 634 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 CACNA1FO60840 1977 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 FCHSD2O94868 740 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 DAB2IPQ5VWQ8 1189 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 SESTD1Q86VW0 696 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 CSRNP2Q9H175 543 aa8.55□□□□□ -1.04
LINC00649-203ENST00000427447 AFMP43652 599 aa8.54□□□□□ -1.04
LINC00649-203ENST00000427447 YWHAEP62258 255 aaKnown RBP8.54□□□□□ -1.04
LINC00649-203ENST00000427447 SEMA3FQ13275 785 aa8.54□□□□□ -1.04
LINC00649-203ENST00000427447 PRPF40BQ6NWY9 871 aaKnown RBP8.54□□□□□ -1.04
LINC00649-203ENST00000427447 KIAA0825Q8IV33 1275 aa8.54□□□□□ -1.04
LINC00649-203ENST00000427447 STX19Q8N4C7 294 aa8.54□□□□□ -1.04
LINC00649-203ENST00000427447 BRD4O60885 1362 aaPredicted RBP8.54□□□□□ -1.04
LINC00649-203ENST00000427447 PDE5AO76074 875 aa8.54□□□□□ -1.04
LINC00649-203ENST00000427447 ASS1P00966 412 aaKnown RBP8.54□□□□□ -1.04
LINC00649-203ENST00000427447 SERPINB8P50452 374 aa8.54□□□□□ -1.04
LINC00649-203ENST00000427447 IRX5P78411 483 aaPredicted RBP8.54□□□□□ -1.04
LINC00649-203ENST00000427447 RAD51AP2Q09MP3 1159 aa8.54□□□□□ -1.04
LINC00649-203ENST00000427447 KANK3Q6NY19 840 aa8.54□□□□□ -1.04
LINC00649-203ENST00000427447 HAUS7Q99871 368 aa8.54□□□□□ -1.04
LINC00649-203ENST00000427447 BAG5Q9UL15 447 aa8.54□□□□□ -1.04
LINC00649-203ENST00000427447 XRCC6P12956 609 aaKnown RBP eCLIP8.54□□□□□ -1.04
LINC00649-203ENST00000427447 XPAP23025 273 aaPredicted RBP8.54□□□□□ -1.04
LINC00649-203ENST00000427447 SIX5Q8N196 739 aa8.54□□□□□ -1.04
LINC00649-203ENST00000427447 ECT2Q9H8V3 914 aa8.54□□□□□ -1.04
LINC00649-203ENST00000427447 SCAMP1O15126 338 aa8.54□□□□□ -1.04
LINC00649-203ENST00000427447 GRIN1Q05586 938 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms