RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 FEZ1Q99689 392 aa15.68■□□□□ 0.1
VRK3-203ENST00000424804 APBA2Q99767 749 aa15.68■□□□□ 0.1
VRK3-203ENST00000424804 HAUS7Q99871 368 aa15.68■□□□□ 0.1
VRK3-203ENST00000424804 C11orf49Q9H6J7 331 aa15.68■□□□□ 0.1
VRK3-203ENST00000424804 PAG1Q9NWQ8 432 aa15.68■□□□□ 0.1
VRK3-203ENST00000424804 MYH8P13535 1937 aa15.67■□□□□ 0.1
VRK3-203ENST00000424804 CYP2D7A0A087X1C5 515 aa15.67■□□□□ 0.1
VRK3-203ENST00000424804 SLC15A5A6NIM6 579 aa15.67■□□□□ 0.1
VRK3-203ENST00000424804 AKR1B1P15121 316 aa15.67■□□□□ 0.1
VRK3-203ENST00000424804 ZKSCAN1P17029 563 aaPredicted RBP15.67■□□□□ 0.1
VRK3-203ENST00000424804 BMP8BP34820 402 aa15.67■□□□□ 0.1
VRK3-203ENST00000424804 GRB14Q14449 540 aa15.67■□□□□ 0.1
VRK3-203ENST00000424804 TRPV1Q8NER1 839 aa15.67■□□□□ 0.1
VRK3-203ENST00000424804 ZNFX1Q9P2E3 1918 aaKnown RBP15.66■□□□□ 0.1
VRK3-203ENST00000424804 A0A1W2PPC1 479 aa15.66■□□□□ 0.1
VRK3-203ENST00000424804 SMARCA5O60264 1052 aaPredicted RBP15.66■□□□□ 0.1
VRK3-203ENST00000424804 MBD4O95243 580 aa15.66■□□□□ 0.1
VRK3-203ENST00000424804 C12orf60Q5U649 245 aa15.66■□□□□ 0.1
VRK3-203ENST00000424804 CLEC10AQ8IUN9 316 aa15.66■□□□□ 0.1
VRK3-203ENST00000424804 C7orf61Q8IZ16 206 aa15.66■□□□□ 0.1
VRK3-203ENST00000424804 ZMYND8Q9ULU4 1186 aaPredicted RBP15.66■□□□□ 0.1
VRK3-203ENST00000424804 COL6A3P12111 3177 aa15.65■□□□□ 0.1
VRK3-203ENST00000424804 COG2Q14746 738 aa15.65■□□□□ 0.1
VRK3-203ENST00000424804 UBE3CQ15386 1083 aa15.65■□□□□ 0.1
VRK3-203ENST00000424804 MOV10L1Q9BXT6 1211 aaKnown RBP15.65■□□□□ 0.1
VRK3-203ENST00000424804 LRRCC1Q9C099 1032 aa15.65■□□□□ 0.1
VRK3-203ENST00000424804 ATP8A2Q9NTI2 1148 aa15.65■□□□□ 0.1
VRK3-203ENST00000424804 TMX2Q9Y320 296 aa15.65■□□□□ 0.1
VRK3-203ENST00000424804 ZNF236Q9UL36 1845 aa15.65■□□□□ 0.1
VRK3-203ENST00000424804 USP17L12C9JPN9 530 aa15.64■□□□□ 0.09
VRK3-203ENST00000424804 USP17L21D6R901 530 aa15.64■□□□□ 0.09
VRK3-203ENST00000424804 SYN1P17600 705 aa15.64■□□□□ 0.09
VRK3-203ENST00000424804 DSG3P32926 999 aa15.64■□□□□ 0.09
VRK3-203ENST00000424804 CDK8P49336 464 aa15.64■□□□□ 0.09
VRK3-203ENST00000424804 CCNA1P78396 465 aa15.64■□□□□ 0.09
VRK3-203ENST00000424804 LRRC26Q2I0M4 334 aa15.64■□□□□ 0.09
VRK3-203ENST00000424804 TMEM179Q6ZVK1 233 aa15.64■□□□□ 0.09
VRK3-203ENST00000424804 LRCH3Q96II8 777 aa15.64■□□□□ 0.09
VRK3-203ENST00000424804 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.64■□□□□ 0.09
VRK3-203ENST00000424804 PUS7LQ9H0K6 701 aaKnown RBP15.64■□□□□ 0.09
VRK3-203ENST00000424804 HOXC10Q9NYD6 342 aa15.64■□□□□ 0.09
VRK3-203ENST00000424804 SWAP70Q9UH65 585 aa15.64■□□□□ 0.09
VRK3-203ENST00000424804 SUPT16HQ9Y5B9 1047 aaKnown RBP15.64■□□□□ 0.09
VRK3-203ENST00000424804 PCDHB15Q9Y5E8 787 aa15.64■□□□□ 0.09
VRK3-203ENST00000424804 GREB1LQ9C091 1923 aaPredicted RBP15.64■□□□□ 0.09
VRK3-203ENST00000424804 COL11A1P12107 1806 aaPredicted RBP15.64■□□□□ 0.09
VRK3-203ENST00000424804 MPHOSPH10O00566 681 aaKnown RBP15.63■□□□□ 0.09
VRK3-203ENST00000424804 COBLO75128 1261 aa15.63■□□□□ 0.09
VRK3-203ENST00000424804 CYP2C19P33261 490 aa15.63■□□□□ 0.09
VRK3-203ENST00000424804 CTR9Q6PD62 1173 aa15.63■□□□□ 0.09
VRK3-203ENST00000424804 C16orf86Q6ZW13 317 aa15.63■□□□□ 0.09
VRK3-203ENST00000424804 ADAMTS5Q9UNA0 930 aa15.63■□□□□ 0.09
VRK3-203ENST00000424804 SMCHD1A6NHR9 2005 aa15.63■□□□□ 0.09
VRK3-203ENST00000424804 MAGEA10P43363 369 aaPredicted RBP15.62■□□□□ 0.09
VRK3-203ENST00000424804 CCAR1Q8IX12 1150 aaKnown RBP15.62■□□□□ 0.09
VRK3-203ENST00000424804 SHCBP1Q8NEM2 672 aa15.62■□□□□ 0.09
VRK3-203ENST00000424804 SPATC1LQ9H0A9 340 aa15.62■□□□□ 0.09
VRK3-203ENST00000424804 VCPKMTQ9H867 229 aa15.62■□□□□ 0.09
VRK3-203ENST00000424804 GLRX3O76003 335 aaKnown RBP15.61■□□□□ 0.09
VRK3-203ENST00000424804 CYBAP13498 195 aa15.61■□□□□ 0.09
VRK3-203ENST00000424804 ERCC3P19447 782 aa15.61■□□□□ 0.09
VRK3-203ENST00000424804 ADORA2AP29274 412 aa15.61■□□□□ 0.09
VRK3-203ENST00000424804 WDR78Q5VTH9 848 aa15.61■□□□□ 0.09
VRK3-203ENST00000424804 ATG4CQ96DT6 458 aa15.61■□□□□ 0.09
VRK3-203ENST00000424804 STRBPQ96SI9 672 aaKnown RBP15.61■□□□□ 0.09
VRK3-203ENST00000424804 DCTPP1Q9H773 170 aa15.61■□□□□ 0.09
VRK3-203ENST00000424804 DDX20Q9UHI6 824 aaKnown RBP15.61■□□□□ 0.09
VRK3-203ENST00000424804 STRNO43815 780 aa15.6■□□□□ 0.09
VRK3-203ENST00000424804 IRX6P78412 446 aaPredicted RBP15.6■□□□□ 0.09
VRK3-203ENST00000424804 ATP2B2Q01814 1243 aa15.6■□□□□ 0.09
VRK3-203ENST00000424804 TMEM132BQ14DG7 1078 aa15.6■□□□□ 0.09
VRK3-203ENST00000424804 MFSD14CQ5VZR4 134 aa15.6■□□□□ 0.09
VRK3-203ENST00000424804 OLFML2BQ68BL8 750 aa15.6■□□□□ 0.09
VRK3-203ENST00000424804 SPICE1Q8N0Z3 855 aa15.6■□□□□ 0.09
VRK3-203ENST00000424804 LPAR1Q92633 364 aa15.6■□□□□ 0.09
VRK3-203ENST00000424804 CCDC17Q96LX7 622 aa15.6■□□□□ 0.09
VRK3-203ENST00000424804 SLC4A4Q9Y6R1 1079 aa15.6■□□□□ 0.09
VRK3-203ENST00000424804 GSG1L2A8MUP6 293 aa15.59■□□□□ 0.09
VRK3-203ENST00000424804 EEF2P13639 858 aaKnown RBP15.59■□□□□ 0.09
VRK3-203ENST00000424804 ICA1Q05084 483 aa15.59■□□□□ 0.09
VRK3-203ENST00000424804 MB21D1Q8N884 522 aa15.59■□□□□ 0.09
VRK3-203ENST00000424804 REPS2Q8NFH8 660 aa15.59■□□□□ 0.09
VRK3-203ENST00000424804 OSBP2Q969R2 916 aa15.59■□□□□ 0.09
VRK3-203ENST00000424804 TANGO6Q9C0B7 1094 aa15.59■□□□□ 0.09
VRK3-203ENST00000424804 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.59■□□□□ 0.092e-7■■■□□ 18.9
VRK3-203ENST00000424804 FBXO28Q9NVF7 368 aa15.59■□□□□ 0.09
VRK3-203ENST00000424804 ZBTB47Q9UFB7 747 aaPredicted RBP15.59■□□□□ 0.09
VRK3-203ENST00000424804 LAMA2P24043 3122 aaKnown RBP15.59■□□□□ 0.09
VRK3-203ENST00000424804 LRIT3Q3SXY7 679 aa15.58■□□□□ 0.08
VRK3-203ENST00000424804 SBK1Q52WX2 424 aa15.58■□□□□ 0.08
VRK3-203ENST00000424804 PRAMEF19Q5SWL8 479 aa15.58■□□□□ 0.08
VRK3-203ENST00000424804 EXOC6Q8TAG9 804 aa15.58■□□□□ 0.08
VRK3-203ENST00000424804 CWC22Q9HCG8 908 aaKnown RBP15.58■□□□□ 0.08
VRK3-203ENST00000424804 IVNS1ABPQ9Y6Y0 642 aa15.58■□□□□ 0.08
VRK3-203ENST00000424804 WDR46O15213 610 aaKnown RBP15.57■□□□□ 0.08
VRK3-203ENST00000424804 FLOT1O75955 427 aa15.57■□□□□ 0.08
VRK3-203ENST00000424804 RASA1P20936 1047 aa15.57■□□□□ 0.08
VRK3-203ENST00000424804 TSHZ3Q63HK5 1081 aa15.57■□□□□ 0.08
VRK3-203ENST00000424804 DPP9Q86TI2 863 aa15.57■□□□□ 0.08
VRK3-203ENST00000424804 ABRAQ8N0Z2 381 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms