RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 LIFRP42702 1097 aa13.38□□□□□ -0.27
ERCC1-204ENST00000423698 PTGDRQ13258 359 aa13.38□□□□□ -0.27
ERCC1-204ENST00000423698 CTR9Q6PD62 1173 aa13.38□□□□□ -0.27
ERCC1-204ENST00000423698 TRIM75PA6NK02 468 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 SLURP2P0DP57 97 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 GNG11P61952 73 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 SMC1AQ14683 1233 aaKnown RBP13.37□□□□□ -0.27
ERCC1-204ENST00000423698 STAG2Q8N3U4 1231 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 SRBD1Q8N5C6 995 aaKnown RBP13.37□□□□□ -0.27
ERCC1-204ENST00000423698 STAG1Q8WVM7 1258 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 NGLY1Q96IV0 654 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 SOWAHDA6NJG2 315 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 EIF6P56537 245 aaKnown RBP13.37□□□□□ -0.27
ERCC1-204ENST00000423698 GSDMDP57764 484 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 IQCA1Q86XH1 822 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 HINFPQ9BQA5 517 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 VPS16Q9H269 839 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 GNL3LQ9NVN8 582 aaKnown RBP13.37□□□□□ -0.27
ERCC1-204ENST00000423698 ABCA3Q99758 1704 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 PLEKHG2Q9H7P9 1386 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 F8W031 263 aaPredicted RBP13.37□□□□□ -0.27
ERCC1-204ENST00000423698 PPP6R2O75170 966 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 PKN1Q16512 942 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 WDR24Q96S15 920 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 TFR2Q9UP52 801 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 CTNND2Q9UQB3 1225 aa13.37□□□□□ -0.27
ERCC1-204ENST00000423698 TMED8Q6PL24 325 aaPredicted RBP13.36□□□□□ -0.27
ERCC1-204ENST00000423698 DZIP1Q86YF9 867 aaKnown RBP13.36□□□□□ -0.27
ERCC1-204ENST00000423698 NOP2P46087 812 aaKnown RBP13.36□□□□□ -0.27
ERCC1-204ENST00000423698 MCM6Q14566 821 aa13.36□□□□□ -0.27
ERCC1-204ENST00000423698 WWC2Q6AWC2 1192 aa13.36□□□□□ -0.27
ERCC1-204ENST00000423698 MAPKAPK5Q8IW41 473 aa13.36□□□□□ -0.27
ERCC1-204ENST00000423698 RIOK1Q9BRS2 568 aaKnown RBP13.36□□□□□ -0.27
ERCC1-204ENST00000423698 RRP15Q9Y3B9 282 aaKnown RBP13.36□□□□□ -0.27
ERCC1-204ENST00000423698 FAM170AA1A519 330 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 ABL1P00519 1130 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 PTPREP23469 700 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 KRT2P35908 639 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 USP5P45974 858 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 TXLNBQ8N3L3 684 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 FBXL16Q8N461 479 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 RNF41Q9H4P4 317 aaPredicted RBP13.35□□□□□ -0.27
ERCC1-204ENST00000423698 TUBE1Q9UJT0 475 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 SHANK3Q9BYB0 1731 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 NRDCO43847 1150 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 CASQ1P31415 396 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 TFAP4Q01664 338 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 DPYDQ12882 1025 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 NFIXQ14938 502 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 WASF1Q92558 559 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 SETDB2Q96T68 719 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 ARGLU1Q9NWB6 273 aaPredicted RBP13.35□□□□□ -0.27
ERCC1-204ENST00000423698 BAZ2AQ9UIF9 1905 aaKnown RBP13.35□□□□□ -0.27
ERCC1-204ENST00000423698 UBR2Q8IWV8 1755 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 RPS8P62241 208 aaKnown RBP13.35□□□□□ -0.27
ERCC1-204ENST00000423698 RILPL1Q5EBL4 403 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 HEATR3Q7Z4Q2 680 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 CLEC10AQ8IUN9 316 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 CCDC150Q8NCX0 1101 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 CTCFLQ8NI51 663 aaPredicted RBP13.35□□□□□ -0.27
ERCC1-204ENST00000423698 TGFBRAP1Q8WUH2 860 aa13.35□□□□□ -0.27
ERCC1-204ENST00000423698 BAG1Q99933 345 aaPredicted RBP13.35□□□□□ -0.27
ERCC1-204ENST00000423698 OSBPL5Q9H0X9 879 aaPredicted RBP13.35□□□□□ -0.27
ERCC1-204ENST00000423698 COL1A1P02452 1464 aaPredicted RBP13.35□□□□□ -0.27
ERCC1-204ENST00000423698 MYH2Q9UKX2 1941 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 CCDC196A0A1B0GTZ2 297 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 HIBADHP31937 336 aaKnown RBP13.34□□□□□ -0.27
ERCC1-204ENST00000423698 SEC23AQ15436 765 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 NBPF20Q3BBV1 942 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 EGFL6Q8IUX8 553 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 MKNK2Q9HBH9 465 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 VPS18Q9P253 973 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 PUF60Q9UHX1 559 aaKnown RBP13.34□□□□□ -0.27
ERCC1-204ENST00000423698 SPATA31A1Q5TZJ5 1347 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 NEMFO60524 1076 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 ZPR1O75312 459 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 MDM2Q00987 491 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-204ENST00000423698 CUL4BQ13620 913 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 RRAGBQ5VZM2 374 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 VSTM4Q8IW00 320 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 ZNF512BQ96KM6 892 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-204ENST00000423698 TAB2Q9NYJ8 693 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 GDAQ9Y2T3 454 aa13.34□□□□□ -0.27
ERCC1-204ENST00000423698 TRIM49BA6NDI0 452 aa13.33□□□□□ -0.27
ERCC1-204ENST00000423698 ACTN4O43707 911 aaKnown RBP13.33□□□□□ -0.27
ERCC1-204ENST00000423698 TBC1D8O95759 1140 aa13.33□□□□□ -0.27
ERCC1-204ENST00000423698 GPS2Q13227 327 aa13.33□□□□□ -0.27
ERCC1-204ENST00000423698 ALX1Q15699 326 aa13.33□□□□□ -0.27
ERCC1-204ENST00000423698 TTC38Q5R3I4 469 aa13.33□□□□□ -0.27
ERCC1-204ENST00000423698 SUGCTQ9HAC7 445 aa13.33□□□□□ -0.27
ERCC1-204ENST00000423698 DCP1AQ9NPI6 582 aaPredicted RBP13.33□□□□□ -0.27
ERCC1-204ENST00000423698 ADAM21Q9UKJ8 722 aa13.33□□□□□ -0.27
ERCC1-204ENST00000423698 NUP98P52948 1817 aa13.33□□□□□ -0.28
ERCC1-204ENST00000423698 H3BQF6 201 aa13.33□□□□□ -0.28
ERCC1-204ENST00000423698 CLSTN1O94985 981 aa13.33□□□□□ -0.28
ERCC1-204ENST00000423698 ZRANB2O95218 330 aaKnown RBP eCLIP13.33□□□□□ -0.28
ERCC1-204ENST00000423698 GNAT2P19087 354 aa13.33□□□□□ -0.28
ERCC1-204ENST00000423698 PARP10Q53GL7 1025 aa13.33□□□□□ -0.28
ERCC1-204ENST00000423698 PAGE5Q96GU1 130 aa13.33□□□□□ -0.28
ERCC1-204ENST00000423698 NLRP3Q96P20 1036 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms