RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 ACTN4O43707 911 aaKnown RBP15.16■□□□□ 0.02
MCF2L-213ENST00000421756 SLU7O95391 586 aaKnown RBP15.16■□□□□ 0.02
MCF2L-213ENST00000421756 DPYDQ12882 1025 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 KMT5BQ4FZB7 885 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 TMTC3Q6ZXV5 915 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 IGSF22Q8N9C0 903 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 WDR24Q96S15 920 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 RTL9Q8NET4 1388 aa15.16■□□□□ 0.02
MCF2L-213ENST00000421756 FAM196BA6NMK8 535 aa15.15■□□□□ 0.02
MCF2L-213ENST00000421756 TRAPPC3LQ5T215 181 aa15.15■□□□□ 0.02
MCF2L-213ENST00000421756 VSTM4Q8IW00 320 aa15.15■□□□□ 0.02
MCF2L-213ENST00000421756 LRRC47Q8N1G4 583 aaKnown RBP15.15■□□□□ 0.02
MCF2L-213ENST00000421756 NUP188Q5SRE5 1749 aa15.15■□□□□ 0.02
MCF2L-213ENST00000421756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.15■□□□□ 0.02
MCF2L-213ENST00000421756 MPHOSPH10O00566 681 aaKnown RBP15.15■□□□□ 0.02
MCF2L-213ENST00000421756 ERICH4A6NGS2 130 aa15.15■□□□□ 0.02
MCF2L-213ENST00000421756 SEC31AO94979 1220 aaKnown RBP15.15■□□□□ 0.02
MCF2L-213ENST00000421756 STAT6P42226 847 aa15.15■□□□□ 0.02
MCF2L-213ENST00000421756 CACNB3P54284 484 aa15.15■□□□□ 0.02
MCF2L-213ENST00000421756 RBL2Q08999 1139 aa15.15■□□□□ 0.02
MCF2L-213ENST00000421756 NYAP1Q6ZVC0 841 aa15.15■□□□□ 0.02
MCF2L-213ENST00000421756 CCDC12Q8WUD4 166 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-213ENST00000421756 NUP88Q99567 741 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-213ENST00000421756 OSBPL5Q9H0X9 879 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-213ENST00000421756 BIN2Q9UBW5 565 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-213ENST00000421756 SYNRGQ9UMZ2 1314 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 G3V3G9 751 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 DOK7Q18PE1 504 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 DCAF8Q5TAQ9 597 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 ZNF771Q7L3S4 317 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-213ENST00000421756 GPCPD1Q9NPB8 672 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 PPP2R2CQ9Y2T4 447 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 MYH14Q7Z406 1995 aaKnown RBP15.14■□□□□ 0.01
MCF2L-213ENST00000421756 LAMB4A4D0S4 1761 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 POLR3GO15318 223 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-213ENST00000421756 SSBP05455 408 aaKnown RBP eCLIP15.14■□□□□ 0.01
MCF2L-213ENST00000421756 CASP14P31944 242 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 MDM2Q00987 491 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-213ENST00000421756 UBXN4Q92575 508 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 TIGD1Q96MW7 591 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 PHF20Q9BVI0 1012 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 TMEM60Q9H2L4 133 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 IL17RBQ9NRM6 502 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 NUP98P52948 1817 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 IKBKBO14920 756 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 ABL1P00519 1130 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 GTF2F1P35269 517 aaKnown RBP eCLIP15.14■□□□□ 0.012e-6■■■■□ 22.9
MCF2L-213ENST00000421756 GTF2IP78347 998 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
MCF2L-213ENST00000421756 SPECC1LQ69YQ0 1117 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 FBXO33Q7Z6M2 555 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 MTERF4Q7Z6M4 381 aaKnown RBP15.14■□□□□ 0.01
MCF2L-213ENST00000421756 TEX11Q8IYF3 940 aa15.14■□□□□ 0.01
MCF2L-213ENST00000421756 UBA7P41226 1012 aa15.13■□□□□ 0.01
MCF2L-213ENST00000421756 NAPAP54920 295 aa15.13■□□□□ 0.01
MCF2L-213ENST00000421756 RAD51AP2Q09MP3 1159 aa15.13■□□□□ 0.01
MCF2L-213ENST00000421756 CCDC178Q5BJE1 867 aa15.13■□□□□ 0.01
MCF2L-213ENST00000421756 MFSD14BQ5SR56 506 aa15.13■□□□□ 0.01
MCF2L-213ENST00000421756 AMOTL1Q8IY63 956 aa15.13■□□□□ 0.01
MCF2L-213ENST00000421756 PRPF3O43395 683 aaKnown RBP15.13■□□□□ 0.01
MCF2L-213ENST00000421756 BTDP43251 543 aa15.13■□□□□ 0.01
MCF2L-213ENST00000421756 ACRBPQ8NEB7 543 aa15.13■□□□□ 0.01
MCF2L-213ENST00000421756 POLD4Q9HCU8 107 aa15.13■□□□□ 0.01
MCF2L-213ENST00000421756 IMPACTQ9P2X3 320 aa15.13■□□□□ 0.01
MCF2L-213ENST00000421756 NARFQ9UHQ1 456 aa15.13■□□□□ 0.01
MCF2L-213ENST00000421756 IL17AQ16552 155 aa15.13■□□□□ 0.01
MCF2L-213ENST00000421756 MSL1Q68DK7 614 aa15.13■□□□□ 0.01
MCF2L-213ENST00000421756 PCNTO95613 3336 aa15.12■□□□□ 0.01
MCF2L-213ENST00000421756 FANCGO15287 622 aa15.12■□□□□ 0.01
MCF2L-213ENST00000421756 MARCH6O60337 910 aa15.12■□□□□ 0.01
MCF2L-213ENST00000421756 CCNT1O60563 726 aaKnown RBP15.12■□□□□ 0.01
MCF2L-213ENST00000421756 TCP10Q12799 353 aa15.12■□□□□ 0.01
MCF2L-213ENST00000421756 ENOX2Q16206 610 aaKnown RBP15.12■□□□□ 0.01
MCF2L-213ENST00000421756 CCDC34Q96HJ3 373 aa15.12■□□□□ 0.01
MCF2L-213ENST00000421756 CDCA7Q9BWT1 371 aaPredicted RBP15.12■□□□□ 0.01
MCF2L-213ENST00000421756 CNTNAP5Q8WYK1 1306 aa15.12■□□□□ 0.01
MCF2L-213ENST00000421756 ETF1P62495 437 aaKnown RBP15.12■□□□□ 0.01
MCF2L-213ENST00000421756 CLEC4GQ6UXB4 293 aa15.12■□□□□ 0.01
MCF2L-213ENST00000421756 MLKLQ8NB16 471 aa15.12■□□□□ 0.01
MCF2L-213ENST00000421756 COA7Q96BR5 231 aa15.12■□□□□ 0.01
MCF2L-213ENST00000421756 TMEM260Q9NX78 707 aa15.12■□□□□ 0.01
MCF2L-213ENST00000421756 ITGB4P16144 1822 aa15.12■□□□□ 0.01
MCF2L-213ENST00000421756 KLRF2D3W0D1 207 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 CTIFO43310 598 aaKnown RBP15.11■□□□□ 0.01
MCF2L-213ENST00000421756 CASQ1P31415 396 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 SLC16A2P36021 539 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 TECP42680 631 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 TXKP42681 527 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 FUT2Q10981 343 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 MORC3Q14149 939 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 BLIDQ8IZY5 108 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 STK36Q9NRP7 1315 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 DISP2A7MBM2 1401 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 XIRP1Q702N8 1843 aaKnown RBP15.11■□□□□ 0.01
MCF2L-213ENST00000421756 SLFN14P0C7P3 912 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 IDEP14735 1019 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 RBM5P52756 815 aaKnown RBP eCLIP15.11■□□□□ 0.012e-6■■■■□ 22.7
MCF2L-213ENST00000421756 GPSM2P81274 684 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 RCSD1Q6JBY9 416 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 DYMQ7RTS9 669 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms