RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 AXIN2Q9Y2T1 843 aa6.91□□□□□ -1.3
CHD2-202ENST00000420239 C4AP0C0L4 1744 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 C4BP0C0L5 1744 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 PALLDQ8WX93 1383 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 CTAGE15A4D2H0 777 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 KIF28PB7ZC32 967 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 CTAGE8P0CG41 777 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 HOXC9P31274 260 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 GGCXP38435 758 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 AMPD2Q01433 879 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 SF3A1Q15459 793 aaKnown RBP6.9□□□□□ -1.3
CHD2-202ENST00000420239 KIF4BQ2VIQ3 1234 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 PREPLQ4J6C6 727 aaPredicted RBP6.9□□□□□ -1.3
CHD2-202ENST00000420239 SPECC1LQ69YQ0 1117 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 NCAPH2Q6IBW4 605 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 CTAGE6Q86UF2 777 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 ARHGEF25Q86VW2 580 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 CTAGE4Q8IX94 777 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 GSPT2Q8IYD1 628 aaKnown RBP6.9□□□□□ -1.3
CHD2-202ENST00000420239 ANKRD24Q8TF21 1146 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 CABS1Q96KC9 395 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 CDC5LQ99459 802 aaKnown RBP6.9□□□□□ -1.3
CHD2-202ENST00000420239 COPRSQ9NQ92 184 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 CAPN7Q9Y6W3 813 aa6.9□□□□□ -1.3
CHD2-202ENST00000420239 TMEM94Q12767 1356 aa6.9□□□□□ -1.31
CHD2-202ENST00000420239 PLEKHG1Q9ULL1 1385 aa6.9□□□□□ -1.31
CHD2-202ENST00000420239 ADAMTS7Q9UKP4 1686 aa6.9□□□□□ -1.31
CHD2-202ENST00000420239 CTAGE9A4FU28 777 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 USP17L3A6NCW0 530 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 USP17L4A6NCW7 530 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 EBAG9O00559 213 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 PPP1R12AO14974 1030 aaPredicted RBP6.89□□□□□ -1.31
CHD2-202ENST00000420239 EIF3HO15372 352 aaKnown RBP eCLIP6.89□□□□□ -1.313e-7■□□□□ 11.3
CHD2-202ENST00000420239 KIF5CO60282 957 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 PPP6R2O75170 966 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 ZNF18P17022 549 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 EIF2S2P20042 333 aaKnown RBP6.89□□□□□ -1.31
CHD2-202ENST00000420239 USP14P54578 494 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 INHBEP58166 350 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 FMR1Q06787 632 aaKnown RBP eCLIP6.89□□□□□ -1.31
CHD2-202ENST00000420239 STIM1Q13586 685 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 SLC39A14Q15043 492 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 C11orf91Q3C1V1 193 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 ANO1Q5XXA6 986 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 USP17L2Q6R6M4 530 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 LYPD8Q6UX82 237 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 RNF19BQ6ZMZ0 732 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 USP17L1Q7RTZ2 530 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 METTL16Q86W50 562 aaKnown RBP6.89□□□□□ -1.31
CHD2-202ENST00000420239 HAUS7Q99871 368 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 SLC4A5Q9BY07 1137 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 HELLSQ9NRZ9 838 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 MAP3K2Q9Y2U5 619 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 SAMM50Q9Y512 469 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 ATXN2Q99700 1313 aaKnown RBP6.89□□□□□ -1.31
CHD2-202ENST00000420239 FSBPO95073 299 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 POLR3DP05423 398 aaPredicted RBP6.89□□□□□ -1.31
CHD2-202ENST00000420239 MYBL2P10244 700 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 PAX7P23759 505 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 ARHGAP25P42331 645 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 PPFIA1Q13136 1202 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 NEDD9Q14511 834 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 HSP90AB3PQ58FF7 597 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 FOXP4Q8IVH2 680 aaPredicted RBP6.89□□□□□ -1.31
CHD2-202ENST00000420239 AMOTL1Q8IY63 956 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 ACRBPQ8NEB7 543 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 GIMAP7Q8NHV1 300 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 FAM76AQ8TAV0 307 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 COG1Q8WTW3 980 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 TBC1D22AQ8WUA7 517 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 N4BP2L2Q92802 583 aaPredicted RBP6.89□□□□□ -1.31
CHD2-202ENST00000420239 GDAP1L1Q96MZ0 367 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 PANX2Q96RD6 677 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 MED15Q96RN5 788 aa6.89□□□□□ -1.31
CHD2-202ENST00000420239 NAPGQ99747 312 aaPredicted RBP6.89□□□□□ -1.31
CHD2-202ENST00000420239 TACO1Q9BSH4 297 aaKnown RBP6.89□□□□□ -1.31
CHD2-202ENST00000420239 PHRF1Q9P1Y6 1649 aaKnown RBP6.88□□□□□ -1.31
CHD2-202ENST00000420239 RGPD8O14715 1765 aaPredicted RBP6.88□□□□□ -1.31
CHD2-202ENST00000420239 A0A0G2JLW4 131 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 ZBBXA8MT70 800 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 AKR1B15C9JRZ8 316 aaPredicted RBP6.88□□□□□ -1.31
CHD2-202ENST00000420239 ARHGAP33O14559 1287 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 FOXN1O15353 648 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 RFX5P48382 616 aaPredicted RBP6.88□□□□□ -1.31
CHD2-202ENST00000420239 GNGT1P63211 74 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 ATP2B2Q01814 1243 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 ELOAQ14241 798 aaKnown RBP6.88□□□□□ -1.31
CHD2-202ENST00000420239 PHLDB3Q6NSJ2 640 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 BLOC1S3Q6QNY0 202 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 SHC4Q6S5L8 630 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 TRMT44Q8IYL2 757 aaKnown RBP6.88□□□□□ -1.31
CHD2-202ENST00000420239 DEPDC4Q8N2C3 294 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 KBTBD3Q8NAB2 608 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 FAM174AQ8TBP5 190 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 RNF217Q8TC41 542 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 ENOX1Q8TC92 643 aaKnown RBP6.88□□□□□ -1.31
CHD2-202ENST00000420239 BCAS4Q8TDM0 211 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 NAA15Q9BXJ9 866 aaKnown RBP6.88□□□□□ -1.31
CHD2-202ENST00000420239 NBPF3Q9H094 633 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 GJB4Q9NTQ9 266 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms