RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
BDNF-208ENST00000418212 MAP2K1Q02750 393 aaPredicted RBP14.78□□□□□ -0.04
BDNF-208ENST00000418212 DNAJC21Q5F1R6 531 aaKnown RBP14.78□□□□□ -0.04
BDNF-208ENST00000418212 NELFBQ8WX92 580 aa14.78□□□□□ -0.04
BDNF-208ENST00000418212 IFT81Q8WYA0 676 aa14.78□□□□□ -0.04
BDNF-208ENST00000418212 SLF1Q9BQI6 1058 aa14.78□□□□□ -0.04
BDNF-208ENST00000418212 XDHP47989 1333 aa14.78□□□□□ -0.04
BDNF-208ENST00000418212 IQGAP3Q86VI3 1631 aa14.78□□□□□ -0.04
BDNF-208ENST00000418212 ACTN2P35609 894 aa14.78□□□□□ -0.04
BDNF-208ENST00000418212 CYP4A11Q02928 519 aa14.78□□□□□ -0.04
BDNF-208ENST00000418212 PRR16Q569H4 304 aa14.78□□□□□ -0.04
BDNF-208ENST00000418212 SEPT12Q8IYM1 358 aa14.78□□□□□ -0.04
BDNF-208ENST00000418212 PSTPIP2Q9H939 334 aa14.78□□□□□ -0.04
BDNF-208ENST00000418212 FRMD4BQ9Y2L6 1034 aa14.78□□□□□ -0.04
BDNF-208ENST00000418212 ADCY10Q96PN6 1610 aa14.78□□□□□ -0.04
BDNF-208ENST00000418212 ICA1Q05084 483 aa14.77□□□□□ -0.04
BDNF-208ENST00000418212 PLCD4Q9BRC7 762 aa14.77□□□□□ -0.04
BDNF-208ENST00000418212 CARD6Q9BX69 1037 aa14.77□□□□□ -0.04
BDNF-208ENST00000418212 PCDHA12Q9UN75 941 aa14.77□□□□□ -0.04
BDNF-208ENST00000418212 PCDHB13Q9Y5F0 798 aa14.77□□□□□ -0.04
BDNF-208ENST00000418212 GOLGA6L10A0A0M3HER8 536 aa14.77□□□□□ -0.04
BDNF-208ENST00000418212 CHGBP05060 677 aa14.77□□□□□ -0.04
BDNF-208ENST00000418212 CMA1P23946 247 aa14.77□□□□□ -0.04
BDNF-208ENST00000418212 PRDX5P30044 214 aa14.77□□□□□ -0.04
BDNF-208ENST00000418212 MYCT1Q8N699 235 aa14.77□□□□□ -0.04
BDNF-208ENST00000418212 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.77□□□□□ -0.04
BDNF-208ENST00000418212 ERVV-1B6SEH8 477 aa14.77□□□□□ -0.05
BDNF-208ENST00000418212 ALAS1P13196 640 aa14.77□□□□□ -0.05
BDNF-208ENST00000418212 EVCP57679 992 aa14.77□□□□□ -0.05
BDNF-208ENST00000418212 GOLGA1Q92805 767 aa14.77□□□□□ -0.05
BDNF-208ENST00000418212 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.77□□□□□ -0.05
BDNF-208ENST00000418212 SORBS3O60504 671 aa14.77□□□□□ -0.05
BDNF-208ENST00000418212 PPARDQ03181 441 aa14.77□□□□□ -0.05
BDNF-208ENST00000418212 GPATCH11Q8N954 259 aa14.77□□□□□ -0.05
BDNF-208ENST00000418212 LZTS2Q9BRK4 669 aa14.77□□□□□ -0.05
BDNF-208ENST00000418212 GCNT3O95395 438 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 SLC16A2P36021 539 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 RNF187Q5TA31 235 aaPredicted RBP14.76□□□□□ -0.05
BDNF-208ENST00000418212 PGBD1Q96JS3 809 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 DESI2Q9BSY9 194 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 SELENOOQ9BVL4 669 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 PLVAPQ9BX97 442 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 PCDHA1Q9Y5I3 950 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 SOS2Q07890 1332 aaPredicted RBP14.76□□□□□ -0.05
BDNF-208ENST00000418212 TRPM1Q7Z4N2 1603 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 ALKQ9UM73 1620 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 TLDC2A0PJX2 215 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 EPB41P11171 864 aaKnown RBP14.76□□□□□ -0.05
BDNF-208ENST00000418212 GABPB1Q06547 395 aaPredicted RBP14.76□□□□□ -0.05
BDNF-208ENST00000418212 FNBP1Q96RU3 617 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 TMOD4Q9NZQ9 345 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 CARMIL3Q8ND23 1372 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 MED23Q9ULK4 1368 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 RAD17O75943 681 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 USP17L2Q6R6M4 530 aa14.76□□□□□ -0.05
BDNF-208ENST00000418212 CELF1Q92879 486 aaKnown RBP14.76□□□□□ -0.05
BDNF-208ENST00000418212 PNPLA6Q8IY17 1366 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 GOLGA6L7A0A1B0GV03 622 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 SMIM23A6NLE4 172 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 TMEM232C9JQI7 657 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 EXOC3O60645 756 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 SLFN13Q68D06 897 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 CEP112Q8N8E3 955 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 CYP2E1P05181 493 aaPredicted RBP14.75□□□□□ -0.05
BDNF-208ENST00000418212 KRT27Q7Z3Y8 459 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.75□□□□□ -0.05
BDNF-208ENST00000418212 SMYD4Q8IYR2 804 aaPredicted RBP14.75□□□□□ -0.05
BDNF-208ENST00000418212 GRAMD1CQ8IYS0 662 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 MRPL44Q9H9J2 332 aaKnown RBP14.75□□□□□ -0.05
BDNF-208ENST00000418212 LEMD3Q9Y2U8 911 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 B4DLN1 442 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 CACNB3P54284 484 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 PPP2R3AQ06190 1150 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 KRBA2Q6ZNG9 492 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 ATP6V0A2Q9Y487 856 aa14.75□□□□□ -0.05
BDNF-208ENST00000418212 KRT5P13647 590 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 KCTD1Q719H9 257 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 NEK8Q86SG6 692 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 HOMEZQ8IX15 550 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 SYMPKQ92797 1274 aaKnown RBP14.74□□□□□ -0.05
BDNF-208ENST00000418212 GLT8D2Q9H1C3 349 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 CPSF1Q10570 1443 aaKnown RBP14.74□□□□□ -0.05
BDNF-208ENST00000418212 TESPA1A2RU30 521 aaPredicted RBP14.74□□□□□ -0.05
BDNF-208ENST00000418212 USP17L3A6NCW0 530 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 USP17L4A6NCW7 530 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 GAS7O60861 476 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 ATP2C2O75185 946 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 GDF11O95390 407 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 MMP10P09238 476 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 MAGEA1P43355 309 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 UBXN2AP68543 259 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 SCARF1Q14162 830 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 SLC39A14Q15043 492 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 DPCR1Q3MIW9 517 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 GRIPAP1Q4V328 841 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 SPECC1LQ69YQ0 1117 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 USP17L1Q7RTZ2 530 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 CCDC25Q86WR0 208 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 CCDC50Q8IVM0 306 aa14.74□□□□□ -0.05
BDNF-208ENST00000418212 SUPT20HQ8NEM7 779 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms