RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 NUP62CLQ9H1M0 184 aa12.32□□□□□ -0.44
SMPD4P1-201ENST00000416717 TSPY26PQ9H489 355 aa12.32□□□□□ -0.44
SMPD4P1-201ENST00000416717 POLR3EQ9NVU0 708 aa12.32□□□□□ -0.44
SMPD4P1-201ENST00000416717 FER1L6Q2WGJ9 1857 aa12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 FAM205CA6NFA0 338 aa12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 XBP1P17861 261 aa12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 GRIPAP1Q4V328 841 aa12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 CKAP2LQ8IYA6 745 aa12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 TCP10L2B9ZVM9 353 aa12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 SCG2P13521 617 aa12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 NASPP49321 788 aaPredicted RBP12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 SLC35G1Q2M3R5 365 aa12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 FSIP1Q8NA03 581 aa12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 DNAJC18Q9H819 358 aa12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 VAT1LQ9HCJ6 419 aa12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 CABP5Q9NP86 173 aa12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 CLIP2Q9UDT6 1046 aa12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 ZNRF3Q9ULT6 936 aa12.31□□□□□ -0.44
SMPD4P1-201ENST00000416717 A0A1B0GVL5 298 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 KLRF2D3W0D1 207 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 RAD21O60216 631 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 VIL1P09327 827 aaKnown RBP12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 TOP1P11387 765 aaKnown RBP12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 NT5C2P49902 561 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 NOM1Q5C9Z4 860 aaKnown RBP12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 OGFOD1Q8N543 542 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 UPF1Q92900 1129 aaKnown RBP eCLIP12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 PHF20Q9BVI0 1012 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 IDI2Q9BXS1 227 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 TRIM34Q9BYJ4 488 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 TAOK3Q9H2K8 898 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 TNMDQ9H2S6 317 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 MTMR4Q9NYA4 1195 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 SWAP70Q9UH65 585 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 FRMPD2Q68DX3 1309 aaPredicted RBP12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 USP17L5A8MUK1 530 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 ADAMTS3O15072 1205 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 CYTH3O43739 400 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 YEATS4O95619 227 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 KRT2P35908 639 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 TOB1P50616 345 aaPredicted RBP12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 NLRP5P59047 1200 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 EARS2Q5JPH6 523 aaKnown RBP12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 SOGA3Q5TF21 947 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 CCDC73Q6ZRK6 1079 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 KCNG4Q8TDN1 519 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 UBA5Q9GZZ9 404 aa12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 FOXP1Q9H334 677 aaPredicted RBP12.3□□□□□ -0.44
SMPD4P1-201ENST00000416717 SHTN1A0MZ66 631 aa12.29□□□□□ -0.44
SMPD4P1-201ENST00000416717 PALM3A6NDB9 673 aaPredicted RBP12.29□□□□□ -0.44
SMPD4P1-201ENST00000416717 PARP1P09874 1014 aaKnown RBP12.29□□□□□ -0.44
SMPD4P1-201ENST00000416717 CXCL9Q07325 125 aa12.29□□□□□ -0.44
SMPD4P1-201ENST00000416717 SLC39A14Q15043 492 aa12.29□□□□□ -0.44
SMPD4P1-201ENST00000416717 DLGAP5Q15398 846 aa12.29□□□□□ -0.44
SMPD4P1-201ENST00000416717 PFKFB3Q16875 520 aaPredicted RBP12.29□□□□□ -0.44
SMPD4P1-201ENST00000416717 HOMER1Q86YM7 354 aa12.29□□□□□ -0.44
SMPD4P1-201ENST00000416717 RGS22Q8NE09 1264 aa12.29□□□□□ -0.44
SMPD4P1-201ENST00000416717 VEZTQ9HBM0 779 aa12.29□□□□□ -0.44
SMPD4P1-201ENST00000416717 PI4KBQ9UBF8 816 aa12.29□□□□□ -0.44
SMPD4P1-201ENST00000416717 SCAF8Q9UPN6 1271 aaKnown RBP12.29□□□□□ -0.44
SMPD4P1-201ENST00000416717 NFKBIEO00221 500 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 LETM1O95202 739 aaPredicted RBP12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 GDF11O95390 407 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 MAP3K11Q16584 847 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 ADALQ6DHV7 355 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 CLIC6Q96NY7 704 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 GMLQ99445 158 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 MAP3K14Q99558 947 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 DHX36Q9H2U1 1008 aaKnown RBP12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 DDX19AQ9NUU7 478 aaKnown RBP12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 HDAC9Q9UKV0 1011 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 PCDHB6Q9Y5E3 794 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 MYO3BQ8WXR4 1341 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 GNAQP50148 359 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 RASSF7Q02833 373 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 PTPAQ15257 358 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 CERKLQ49MI3 558 aaPredicted RBP12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 HEATR3Q7Z4Q2 680 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 NLGN2Q8NFZ4 835 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 JDP2Q8WYK2 163 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 MRPS27Q92552 414 aaKnown RBP12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 SGIP1Q9BQI5 828 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 CLSTN2Q9H4D0 955 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 GPCPD1Q9NPB8 672 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 MRVI1Q9Y6F6 885 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 SRCAPQ6ZRS2 3230 aa12.28□□□□□ -0.44
SMPD4P1-201ENST00000416717 TTLL1O95922 423 aa12.27□□□□□ -0.44
SMPD4P1-201ENST00000416717 PTGER2P43116 358 aa12.27□□□□□ -0.44
SMPD4P1-201ENST00000416717 NDUFA8P51970 172 aa12.27□□□□□ -0.44
SMPD4P1-201ENST00000416717 SNW1Q13573 536 aaKnown RBP12.27□□□□□ -0.44
SMPD4P1-201ENST00000416717 NPY5RQ15761 445 aa12.27□□□□□ -0.44
SMPD4P1-201ENST00000416717 TYW1BQ6NUM6 668 aa12.27□□□□□ -0.44
SMPD4P1-201ENST00000416717 ERCC4Q92889 916 aaPredicted RBP12.27□□□□□ -0.44
SMPD4P1-201ENST00000416717 CSRNP1Q96S65 589 aa12.27□□□□□ -0.44
SMPD4P1-201ENST00000416717 EHD4Q9H223 541 aa12.27□□□□□ -0.44
SMPD4P1-201ENST00000416717 BRMS1Q9HCU9 246 aa12.27□□□□□ -0.44
SMPD4P1-201ENST00000416717 TMOD2Q9NZR1 351 aa12.27□□□□□ -0.44
SMPD4P1-201ENST00000416717 PLIN4Q96Q06 1357 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms