RNA–Protein interactions for RNA: ENST00000416553.1

AP002856.2-201, humanhuman

TSL 3 BASIC

Gene AP002856.2, Length 584 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.2-201ENST00000416553 RASA1P20936 1047 aa16.17■□□□□ 0.18
AP002856.2-201ENST00000416553 MAPK4P31152 587 aa16.17■□□□□ 0.18
AP002856.2-201ENST00000416553 TDO2P48775 406 aa16.17■□□□□ 0.18
AP002856.2-201ENST00000416553 COG2Q14746 738 aa16.17■□□□□ 0.18
AP002856.2-201ENST00000416553 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.17■□□□□ 0.18
AP002856.2-201ENST00000416553 UNC93B1Q9H1C4 597 aa16.17■□□□□ 0.18
AP002856.2-201ENST00000416553 HOXC10Q9NYD6 342 aa16.17■□□□□ 0.18
AP002856.2-201ENST00000416553 PLXNB2O15031 1838 aa16.17■□□□□ 0.18
AP002856.2-201ENST00000416553 SPDYE16A6NNV3 312 aaPredicted RBP16.16■□□□□ 0.18
AP002856.2-201ENST00000416553 GJA8P48165 433 aa16.16■□□□□ 0.18
AP002856.2-201ENST00000416553 CCAR1Q8IX12 1150 aaKnown RBP16.16■□□□□ 0.18
AP002856.2-201ENST00000416553 SPICE1Q8N0Z3 855 aa16.16■□□□□ 0.18
AP002856.2-201ENST00000416553 LPAR1Q92633 364 aa16.16■□□□□ 0.18
AP002856.2-201ENST00000416553 SHISA4Q96DD7 197 aa16.16■□□□□ 0.18
AP002856.2-201ENST00000416553 NUDT12Q9BQG2 462 aa16.16■□□□□ 0.18
AP002856.2-201ENST00000416553 SH2D4AQ9H788 454 aa16.16■□□□□ 0.18
AP002856.2-201ENST00000416553 VCPKMTQ9H867 229 aa16.16■□□□□ 0.18
AP002856.2-201ENST00000416553 MKNK2Q9HBH9 465 aa16.16■□□□□ 0.18
AP002856.2-201ENST00000416553 BTBD7Q9P203 1132 aa16.16■□□□□ 0.18
AP002856.2-201ENST00000416553 ROBO3Q96MS0 1386 aa16.15■□□□□ 0.18
AP002856.2-201ENST00000416553 CYP2B6P20813 491 aa16.15■□□□□ 0.18
AP002856.2-201ENST00000416553 CCNA1P78396 465 aa16.15■□□□□ 0.18
AP002856.2-201ENST00000416553 ATP2B2Q01814 1243 aa16.15■□□□□ 0.18
AP002856.2-201ENST00000416553 NUCB1Q02818 461 aa16.15■□□□□ 0.18
AP002856.2-201ENST00000416553 CCDC129Q6ZRS4 1044 aa16.15■□□□□ 0.18
AP002856.2-201ENST00000416553 GPR142Q7Z601 462 aa16.15■□□□□ 0.18
AP002856.2-201ENST00000416553 PLEKHH3Q7Z736 793 aa16.15■□□□□ 0.18
AP002856.2-201ENST00000416553 CHD1LQ86WJ1 897 aa16.15■□□□□ 0.18
AP002856.2-201ENST00000416553 NKX2-3Q8TAU0 364 aa16.15■□□□□ 0.18
AP002856.2-201ENST00000416553 USP6NLQ92738 828 aa16.15■□□□□ 0.18
AP002856.2-201ENST00000416553 NACAP1Q9BZK3 213 aa16.15■□□□□ 0.18
AP002856.2-201ENST00000416553 TANGO6Q9C0B7 1094 aa16.15■□□□□ 0.18
AP002856.2-201ENST00000416553 RLFQ13129 1914 aa16.14■□□□□ 0.17
AP002856.2-201ENST00000416553 HMGCRP04035 888 aa16.14■□□□□ 0.17
AP002856.2-201ENST00000416553 XRCC5P13010 732 aaKnown RBP16.14■□□□□ 0.17
AP002856.2-201ENST00000416553 MORN1Q5T089 497 aa16.14■□□□□ 0.17
AP002856.2-201ENST00000416553 U2AF1L4Q8WU68 220 aaKnown RBP16.14■□□□□ 0.17
AP002856.2-201ENST00000416553 SOCS4Q8WXH5 440 aa16.14■□□□□ 0.17
AP002856.2-201ENST00000416553 FOXP2O15409 715 aa16.13■□□□□ 0.17
AP002856.2-201ENST00000416553 PRDM1O75626 825 aa16.13■□□□□ 0.17
AP002856.2-201ENST00000416553 SGPL1O95470 568 aa16.13■□□□□ 0.17
AP002856.2-201ENST00000416553 DSG3P32926 999 aa16.13■□□□□ 0.17
AP002856.2-201ENST00000416553 TRIM32Q13049 653 aa16.13■□□□□ 0.17
AP002856.2-201ENST00000416553 PRPF38BQ5VTL8 546 aaKnown RBP16.13■□□□□ 0.17
AP002856.2-201ENST00000416553 PLEKHM2Q8IWE5 1019 aa16.13■□□□□ 0.17
AP002856.2-201ENST00000416553 ZNF444Q8N0Y2 327 aaPredicted RBP16.13■□□□□ 0.17
AP002856.2-201ENST00000416553 TRIB2Q92519 343 aa16.13■□□□□ 0.17
AP002856.2-201ENST00000416553 NAPBQ9H115 298 aa16.13■□□□□ 0.17
AP002856.2-201ENST00000416553 ZNF287Q9HBT7 754 aa16.13■□□□□ 0.17
AP002856.2-201ENST00000416553 PAK6Q9NQU5 681 aaPredicted RBP16.13■□□□□ 0.17
AP002856.2-201ENST00000416553 HELLSQ9NRZ9 838 aa16.13■□□□□ 0.17
AP002856.2-201ENST00000416553 CEP290O15078 2479 aa16.13■□□□□ 0.17
AP002856.2-201ENST00000416553 GREB1LQ9C091 1923 aaPredicted RBP16.12■□□□□ 0.17
AP002856.2-201ENST00000416553 WDR46O15213 610 aaKnown RBP16.12■□□□□ 0.17
AP002856.2-201ENST00000416553 FLOT1O75955 427 aa16.12■□□□□ 0.17
AP002856.2-201ENST00000416553 PPARAQ07869 468 aa16.12■□□□□ 0.17
AP002856.2-201ENST00000416553 TICAM2Q86XR7 235 aa16.12■□□□□ 0.17
AP002856.2-201ENST00000416553 FAM227BQ96M60 508 aa16.12■□□□□ 0.17
AP002856.2-201ENST00000416553 DEFB118Q96PH6 123 aa16.12■□□□□ 0.17
AP002856.2-201ENST00000416553 GOPCQ9HD26 462 aa16.12■□□□□ 0.17
AP002856.2-201ENST00000416553 NYAP2Q9P242 653 aa16.12■□□□□ 0.17
AP002856.2-201ENST00000416553 IGKV6D-41A0A0C4DH26 115 aa16.11■□□□□ 0.17
AP002856.2-201ENST00000416553 TRIM6-TRIM34B2RNG4 842 aa16.11■□□□□ 0.17
AP002856.2-201ENST00000416553 PTPREP23469 700 aa16.11■□□□□ 0.17
AP002856.2-201ENST00000416553 RGS2P41220 211 aa16.11■□□□□ 0.17
AP002856.2-201ENST00000416553 VPS53Q5VIR6 699 aa16.11■□□□□ 0.17
AP002856.2-201ENST00000416553 WDR78Q5VTH9 848 aa16.11■□□□□ 0.17
AP002856.2-201ENST00000416553 UBE2Q1Q7Z7E8 422 aa16.11■□□□□ 0.17
AP002856.2-201ENST00000416553 MB21D1Q8N884 522 aa16.11■□□□□ 0.17
AP002856.2-201ENST00000416553 ATG4CQ96DT6 458 aa16.11■□□□□ 0.17
AP002856.2-201ENST00000416553 MOV10L1Q9BXT6 1211 aaKnown RBP16.11■□□□□ 0.17
AP002856.2-201ENST00000416553 SPATC1LQ9H0A9 340 aa16.11■□□□□ 0.17
AP002856.2-201ENST00000416553 OSBPL3Q9H4L5 887 aa16.11■□□□□ 0.17
AP002856.2-201ENST00000416553 CWC22Q9HCG8 908 aaKnown RBP16.11■□□□□ 0.17
AP002856.2-201ENST00000416553 RPTORQ8N122 1335 aa16.11■□□□□ 0.17
AP002856.2-201ENST00000416553 A0A0D9SFI3 127 aa16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 SLC15A5A6NIM6 579 aa16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 RAD21O60216 631 aa16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 TFRCP02786 760 aaKnown RBP16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 SLC3A2P08195 630 aaKnown RBP16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 PDE4BQ07343 736 aa16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 MAP2K5Q13163 448 aa16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 CCL14Q16627 93 aa16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 MCMDC2Q4G0Z9 681 aa16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 TRMT44Q8IYL2 757 aaKnown RBP16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 MKL1Q969V6 931 aa16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 RILPL2Q969X0 211 aa16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 HMX1Q9NP08 348 aaPredicted RBP16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 FBXO28Q9NVF7 368 aa16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 MTMR4Q9NYA4 1195 aa16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 CLIP2Q9UDT6 1046 aa16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 ADAMTS5Q9UNA0 930 aa16.1■□□□□ 0.17
AP002856.2-201ENST00000416553 F5H6K3 240 aa16.09■□□□□ 0.17
AP002856.2-201ENST00000416553 IRX6P78412 446 aaPredicted RBP16.09■□□□□ 0.17
AP002856.2-201ENST00000416553 KLRC3Q07444 240 aa16.09■□□□□ 0.17
AP002856.2-201ENST00000416553 NMIQ13287 307 aaPredicted RBP16.09■□□□□ 0.17
AP002856.2-201ENST00000416553 ALX1Q15699 326 aa16.09■□□□□ 0.17
AP002856.2-201ENST00000416553 FAM47AQ5JRC9 791 aa16.09■□□□□ 0.17
AP002856.2-201ENST00000416553 FAM83BQ5T0W9 1011 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms