RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 NLRP12P59046 1061 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 POLA2Q14181 598 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 GEN1Q17RS7 908 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 MIER3Q7Z3K6 550 aa11.82□□□□□ -0.52
COL12A1-203ENST00000416123 ZHX1Q9UKY1 873 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-203ENST00000416123 SH3BP5O60239 455 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 JAKMIP2Q96AA8 810 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 GLT8D2Q9H1C3 349 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 ZKSCAN5Q9Y2L8 839 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 OPA1O60313 960 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 SULF1Q8IWU6 871 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 TRPC5Q9UL62 973 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-203ENST00000416123 COBLO75128 1261 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 MYCP01106 439 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-203ENST00000416123 SNX16P57768 344 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 UBXN2AP68543 259 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 IFRD2Q12894 506 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-203ENST00000416123 PTPROQ16827 1216 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 PNMA1Q8ND90 353 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 NSRP1Q9H0G5 558 aaKnown RBP11.81□□□□□ -0.52
COL12A1-203ENST00000416123 DDX25Q9UHL0 483 aaKnown RBP11.81□□□□□ -0.52
COL12A1-203ENST00000416123 RSPH14Q9UHP6 348 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 ATP2A2P16615 1042 aaKnown RBP11.81□□□□□ -0.52
COL12A1-203ENST00000416123 ERCC5P28715 1186 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-203ENST00000416123 ADD1P35611 737 aaKnown RBP11.81□□□□□ -0.52
COL12A1-203ENST00000416123 PPP2R3AQ06190 1150 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 CCDC14Q49A88 953 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 ANKRD35Q8N283 1001 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 GPBP1Q86WP2 473 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 SERTAD1Q9UHV2 236 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 NPHP4O75161 1426 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-203ENST00000416123 DKC1O60832 514 aaKnown RBP eCLIP11.81□□□□□ -0.52
COL12A1-203ENST00000416123 HSPA4P34932 840 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 OTUD6AQ7L8S5 288 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 C17orf53Q8N3J3 647 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-203ENST00000416123 GPR101Q96P66 508 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-203ENST00000416123 ZBTB1Q9Y2K1 713 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 DYNLL1P63167 89 aaKnown RBP11.81□□□□□ -0.52
COL12A1-203ENST00000416123 CCDC6Q16204 474 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 LIN9Q5TKA1 542 aa11.81□□□□□ -0.52
COL12A1-203ENST00000416123 KLRF2D3W0D1 207 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 CD19P15391 556 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 CHURC1Q8WUH1 139 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 MTX1Q13505 466 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 SESTD1Q86VW0 696 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 CLSTN2Q9H4D0 955 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 INSRP06213 1382 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 TNFAIP1Q13829 316 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 DCUN1D2Q6PH85 259 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 MED10Q9BTT4 135 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 MTRF1LQ9UGC7 380 aaKnown RBP11.8□□□□□ -0.52
COL12A1-203ENST00000416123 PCDHA12Q9UN75 941 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 NR1I2O75469 434 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 RAD17O75943 681 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 GTF3C6Q969F1 213 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 PALD1Q9ULE6 856 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 FAM204AQ9H8W3 233 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 FAM207AQ9NSI2 230 aaPredicted RBP11.8□□□□□ -0.52
COL12A1-203ENST00000416123 ABCB5Q2M3G0 1257 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 TYW1BQ6NUM6 668 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 KRT222Q8N1A0 295 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 STMN4Q9H169 189 aaPredicted RBP11.8□□□□□ -0.52
COL12A1-203ENST00000416123 SUGCTQ9HAC7 445 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 NLRC4Q9NPP4 1024 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 RTEL1Q9NZ71 1219 aa11.8□□□□□ -0.52
COL12A1-203ENST00000416123 UTP11Q9Y3A2 253 aaKnown RBP11.8□□□□□ -0.52
COL12A1-203ENST00000416123 TNNC1P63316 161 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 ICA1Q05084 483 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 CALCOCO2Q13137 446 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 CCPG1Q9ULG6 757 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 HPDP32754 393 aaPredicted RBP11.79□□□□□ -0.52
COL12A1-203ENST00000416123 BLIDQ8IZY5 108 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 MAGI2Q86UL8 1455 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 TNKSO95271 1327 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 PCCAP05165 728 aaPredicted RBP11.79□□□□□ -0.52
COL12A1-203ENST00000416123 VAV2P52735 878 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 CFAP157Q5JU67 520 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 FBXO11Q86XK2 927 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 CCDC26Q8TAB7 109 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 TPCN1Q9ULQ1 816 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 ANKS4BQ8N8V4 417 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 DEPTORQ8TB45 409 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 MED23Q9ULK4 1368 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 POLR2MP0CAP2 368 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 SF3A3Q12874 501 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL12A1-203ENST00000416123 PANK4Q9NVE7 773 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 CALCOCO1Q9P1Z2 691 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 CDC42BPGQ6DT37 1551 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 ZMYM6O95789 1325 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 MAP7D1Q3KQU3 841 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 VWA3BQ502W6 1294 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 CARD10Q9BWT7 1032 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 LSM14BQ9BX40 385 aaKnown RBP11.79□□□□□ -0.52
COL12A1-203ENST00000416123 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
COL12A1-203ENST00000416123 ABCC4O15439 1325 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 KDM2BQ8NHM5 1336 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 FLAD1Q8NFF5 587 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 EEF2KMTQ96G04 330 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 CLIC6Q96NY7 704 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 CSRNP1Q96S65 589 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms