RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ZBTB21Q9ULJ3 1066 aa18.09■□□□□ 0.49
SHMT2-202ENST00000414700 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.09■□□□□ 0.49
SHMT2-202ENST00000414700 PKP1Q13835 747 aa18.08■□□□□ 0.49
SHMT2-202ENST00000414700 CCDC178Q5BJE1 867 aa18.08■□□□□ 0.49
SHMT2-202ENST00000414700 MAP1SQ66K74 1059 aaPredicted RBP18.08■□□□□ 0.49
SHMT2-202ENST00000414700 TRIM44Q96DX7 344 aaPredicted RBP18.08■□□□□ 0.49
SHMT2-202ENST00000414700 DDX11Q96FC9 970 aa18.08■□□□□ 0.49
SHMT2-202ENST00000414700 KANSL2Q9H9L4 492 aa18.08■□□□□ 0.49
SHMT2-202ENST00000414700 CLEC11AQ9Y240 323 aa18.08■□□□□ 0.49
SHMT2-202ENST00000414700 TOP1P11387 765 aaKnown RBP18.08■□□□□ 0.48
SHMT2-202ENST00000414700 GJB2P29033 226 aa18.08■□□□□ 0.48
SHMT2-202ENST00000414700 ICA1Q05084 483 aa18.08■□□□□ 0.48
SHMT2-202ENST00000414700 FMR1Q06787 632 aaKnown RBP eCLIP18.08■□□□□ 0.48
SHMT2-202ENST00000414700 RTN1Q16799 776 aa18.08■□□□□ 0.48
SHMT2-202ENST00000414700 CCDC82Q8N4S0 544 aa18.08■□□□□ 0.48
SHMT2-202ENST00000414700 CABP5Q9NP86 173 aa18.08■□□□□ 0.48
SHMT2-202ENST00000414700 SMC3Q9UQE7 1217 aa18.08■□□□□ 0.48
SHMT2-202ENST00000414700 NID2Q14112 1375 aa18.08■□□□□ 0.48
SHMT2-202ENST00000414700 A0A1W2PRG0 241 aa18.07■□□□□ 0.48
SHMT2-202ENST00000414700 DDAH1O94760 285 aa18.07■□□□□ 0.48
SHMT2-202ENST00000414700 NTRK3Q16288 839 aa18.07■□□□□ 0.48
SHMT2-202ENST00000414700 ZKSCAN4Q969J2 545 aaPredicted RBP18.07■□□□□ 0.48
SHMT2-202ENST00000414700 PTPDC1A2A3K4 754 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 UBE2Q2LH0YL09 131 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 ECE1P42892 770 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 DCAF15Q66K64 600 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 STAG2Q8N3U4 1231 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 PHKBQ93100 1093 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 CDCA5Q96FF9 252 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 WRNIP1Q96S55 665 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 DOCK1Q14185 1865 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 CPLX1O14810 134 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 PLEKHA8P1O95397 391 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 SUPT20HL1Q3ZLR7 823 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 SMARCC2Q8TAQ2 1214 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 ACER1Q8TDN7 264 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 ZNF341Q9BYN7 854 aa18.06■□□□□ 0.48
SHMT2-202ENST00000414700 TRAF5O00463 557 aa18.05■□□□□ 0.48
SHMT2-202ENST00000414700 USP2O75604 605 aaPredicted RBP18.05■□□□□ 0.48
SHMT2-202ENST00000414700 GOLGA8HP0CJ92 632 aa18.05■□□□□ 0.48
SHMT2-202ENST00000414700 FDPSP14324 419 aaKnown RBP18.05■□□□□ 0.48
SHMT2-202ENST00000414700 RCAN1P53805 252 aa18.05■□□□□ 0.48
SHMT2-202ENST00000414700 USP17L2Q6R6M4 530 aa18.05■□□□□ 0.48
SHMT2-202ENST00000414700 KLRG1Q96E93 195 aa18.05■□□□□ 0.48
SHMT2-202ENST00000414700 NYAP2Q9P242 653 aa18.05■□□□□ 0.48
SHMT2-202ENST00000414700 ZNF112Q9UJU3 913 aa18.05■□□□□ 0.48
SHMT2-202ENST00000414700 OTOFQ9HC10 1997 aa18.05■□□□□ 0.48
SHMT2-202ENST00000414700 USP17L5A8MUK1 530 aa18.05■□□□□ 0.48
SHMT2-202ENST00000414700 ASNSP08243 561 aa18.05■□□□□ 0.48
SHMT2-202ENST00000414700 CDC37L1Q7L3B6 337 aa18.05■□□□□ 0.48
SHMT2-202ENST00000414700 NBPF11Q86T75 865 aa18.05■□□□□ 0.48
SHMT2-202ENST00000414700 LLPHQ9BRT6 129 aaKnown RBP18.05■□□□□ 0.48
SHMT2-202ENST00000414700 MAD2L2Q9UI95 211 aa18.05■□□□□ 0.48
SHMT2-202ENST00000414700 MYH6P13533 1939 aa18.04■□□□□ 0.48
SHMT2-202ENST00000414700 DHX16O60231 1041 aaKnown RBP18.04■□□□□ 0.48
SHMT2-202ENST00000414700 CTNND1O60716 968 aaKnown RBP18.04■□□□□ 0.48
SHMT2-202ENST00000414700 CALM1P0DP23 149 aa18.04■□□□□ 0.48
SHMT2-202ENST00000414700 CALM2P0DP24 149 aa18.04■□□□□ 0.48
SHMT2-202ENST00000414700 CALM3P0DP25 149 aa18.04■□□□□ 0.48
SHMT2-202ENST00000414700 PDHBP11177 359 aa18.04■□□□□ 0.48
SHMT2-202ENST00000414700 MOB2Q70IA6 237 aa18.04■□□□□ 0.48
SHMT2-202ENST00000414700 MKL1Q969V6 931 aa18.04■□□□□ 0.48
SHMT2-202ENST00000414700 HOOK2Q96ED9 719 aa18.04■□□□□ 0.48
SHMT2-202ENST00000414700 CPVLQ9H3G5 476 aa18.04■□□□□ 0.48
SHMT2-202ENST00000414700 PAPPA2Q9BXP8 1791 aa18.04■□□□□ 0.48
SHMT2-202ENST00000414700 RAD21O60216 631 aa18.03■□□□□ 0.48
SHMT2-202ENST00000414700 GRM4Q14833 912 aa18.03■□□□□ 0.48
SHMT2-202ENST00000414700 CTCFLQ8NI51 663 aaPredicted RBP18.03■□□□□ 0.48
SHMT2-202ENST00000414700 CWC22Q9HCG8 908 aaKnown RBP18.03■□□□□ 0.48
SHMT2-202ENST00000414700 FUT2Q10981 343 aa18.03■□□□□ 0.48
SHMT2-202ENST00000414700 SLC35G1Q2M3R5 365 aa18.03■□□□□ 0.48
SHMT2-202ENST00000414700 TMTC3Q6ZXV5 915 aa18.03■□□□□ 0.48
SHMT2-202ENST00000414700 SRBD1Q8N5C6 995 aaKnown RBP18.03■□□□□ 0.48
SHMT2-202ENST00000414700 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.03■□□□□ 0.484e-7■■□□□ 12.9
SHMT2-202ENST00000414700 AIFM3Q96NN9 605 aa18.03■□□□□ 0.48
SHMT2-202ENST00000414700 FRMPD2Q68DX3 1309 aaPredicted RBP18.02■□□□□ 0.48
SHMT2-202ENST00000414700 hCG_1642624A0A1W2PR95 340 aa18.02■□□□□ 0.48
SHMT2-202ENST00000414700 IFNAR1P17181 557 aa18.02■□□□□ 0.48
SHMT2-202ENST00000414700 KIAA1755Q5JYT7 1200 aa18.02■□□□□ 0.48
SHMT2-202ENST00000414700 PHIPQ8WWQ0 1821 aa18.02■□□□□ 0.47
SHMT2-202ENST00000414700 SNHG28P0DPA3 235 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 SYT1P21579 422 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 FOSBP53539 338 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 ZYXQ15942 572 aaKnown RBP18.01■□□□□ 0.47
SHMT2-202ENST00000414700 SCYL3Q8IZE3 742 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 SPICE1Q8N0Z3 855 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 SLC26A6Q9BXS9 759 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 GJB4Q9NTQ9 266 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 CCDC196A0A1B0GTZ2 297 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 PALM3A6NDB9 673 aaPredicted RBP18.01■□□□□ 0.47
SHMT2-202ENST00000414700 F5H6K3 240 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 PTMSP20962 102 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 KLRC3Q07444 240 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 DGKZQ13574 1117 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.01■□□□□ 0.47
SHMT2-202ENST00000414700 LDHDQ86WU2 507 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 MAP3K14Q99558 947 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 NUP88Q99567 741 aaPredicted RBP18.01■□□□□ 0.47
SHMT2-202ENST00000414700 RBM28Q9NW13 759 aaKnown RBP18.01■□□□□ 0.47
SHMT2-202ENST00000414700 ORC3Q9UBD5 711 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms