RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 FTSJ3Q8IY81 847 aaKnown RBP14.77□□□□□ -0.05
LIMS2-210ENST00000413578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.77□□□□□ -0.05
LIMS2-210ENST00000413578 SPATC1LQ9H0A9 340 aa14.77□□□□□ -0.05
LIMS2-210ENST00000413578 DCP1AQ9NPI6 582 aaPredicted RBP14.77□□□□□ -0.05
LIMS2-210ENST00000413578 HOXC10Q9NYD6 342 aa14.77□□□□□ -0.05
LIMS2-210ENST00000413578 A0A0G2JMZ2 1700 aa14.77□□□□□ -0.05
LIMS2-210ENST00000413578 SPTBN5Q9NRC6 3674 aaKnown RBP14.76□□□□□ -0.05
LIMS2-210ENST00000413578 DNAH12Q6ZR08 3092 aa14.76□□□□□ -0.05
LIMS2-210ENST00000413578 MAGEB6P1A0A0J9YX57 407 aa14.76□□□□□ -0.05
LIMS2-210ENST00000413578 SEPT4O43236 478 aa14.76□□□□□ -0.05
LIMS2-210ENST00000413578 POLR3DP05423 398 aaPredicted RBP14.76□□□□□ -0.05
LIMS2-210ENST00000413578 CNGA1P29973 690 aa14.76□□□□□ -0.05
LIMS2-210ENST00000413578 DSG3P32926 999 aa14.76□□□□□ -0.05
LIMS2-210ENST00000413578 RTP1P59025 263 aa14.76□□□□□ -0.05
LIMS2-210ENST00000413578 TTF1Q15361 905 aaPredicted RBP14.76□□□□□ -0.05
LIMS2-210ENST00000413578 MB21D1Q8N884 522 aa14.76□□□□□ -0.05
LIMS2-210ENST00000413578 SLC44A5Q8NCS7 719 aa14.76□□□□□ -0.05
LIMS2-210ENST00000413578 CRNKL1Q9BZJ0 848 aaKnown RBP14.76□□□□□ -0.05
LIMS2-210ENST00000413578 MCM9Q9NXL9 1143 aa14.76□□□□□ -0.05
LIMS2-210ENST00000413578 LAMA2P24043 3122 aaKnown RBP14.75□□□□□ -0.05
LIMS2-210ENST00000413578 ZNF532Q9HCE3 1301 aa14.75□□□□□ -0.05
LIMS2-210ENST00000413578 RLFQ13129 1914 aa14.75□□□□□ -0.05
LIMS2-210ENST00000413578 CYP2D6P10635 497 aa14.75□□□□□ -0.05
LIMS2-210ENST00000413578 GJC2Q5T442 439 aaPredicted RBP14.75□□□□□ -0.05
LIMS2-210ENST00000413578 SLC9C2Q5TAH2 1124 aa14.75□□□□□ -0.05
LIMS2-210ENST00000413578 SLC39A5Q6ZMH5 540 aa14.75□□□□□ -0.05
LIMS2-210ENST00000413578 TMEM179Q6ZVK1 233 aa14.75□□□□□ -0.05
LIMS2-210ENST00000413578 DPP9Q86TI2 863 aa14.75□□□□□ -0.05
LIMS2-210ENST00000413578 ABRAQ8N0Z2 381 aa14.75□□□□□ -0.05
LIMS2-210ENST00000413578 LCORLQ8N3X6 602 aa14.75□□□□□ -0.05
LIMS2-210ENST00000413578 RHPN1Q8TCX5 695 aa14.75□□□□□ -0.05
LIMS2-210ENST00000413578 SDR42E1Q8WUS8 393 aa14.75□□□□□ -0.05
LIMS2-210ENST00000413578 LBHD1Q9BQE6 289 aaPredicted RBP14.75□□□□□ -0.05
LIMS2-210ENST00000413578 TMX2Q9Y320 296 aa14.75□□□□□ -0.05
LIMS2-210ENST00000413578 VCANP13611 3396 aa14.74□□□□□ -0.05
LIMS2-210ENST00000413578 C1orf53Q5VUE5 145 aa14.74□□□□□ -0.05
LIMS2-210ENST00000413578 ARRDC4Q8NCT1 418 aa14.74□□□□□ -0.05
LIMS2-210ENST00000413578 ATG4CQ96DT6 458 aa14.74□□□□□ -0.05
LIMS2-210ENST00000413578 TANGO6Q9C0B7 1094 aa14.74□□□□□ -0.05
LIMS2-210ENST00000413578 IL1RAPL2Q9NP60 686 aa14.74□□□□□ -0.05
LIMS2-210ENST00000413578 SWAP70Q9UH65 585 aa14.74□□□□□ -0.05
LIMS2-210ENST00000413578 MPHOSPH10O00566 681 aaKnown RBP14.73□□□□□ -0.05
LIMS2-210ENST00000413578 CLEC10AQ8IUN9 316 aa14.73□□□□□ -0.05
LIMS2-210ENST00000413578 DYNLL2Q96FJ2 89 aa14.73□□□□□ -0.05
LIMS2-210ENST00000413578 COL25A1Q9BXS0 654 aaPredicted RBP14.73□□□□□ -0.05
LIMS2-210ENST00000413578 MROH8Q9H579 483 aa14.73□□□□□ -0.05
LIMS2-210ENST00000413578 PDLIM7Q9NR12 457 aa14.73□□□□□ -0.05
LIMS2-210ENST00000413578 ADAMTS5Q9UNA0 930 aa14.73□□□□□ -0.05
LIMS2-210ENST00000413578 ATP11BQ9Y2G3 1177 aa14.73□□□□□ -0.05
LIMS2-210ENST00000413578 CDH23Q9H251 3354 aa14.73□□□□□ -0.05
LIMS2-210ENST00000413578 LTBP2Q14767 1821 aa14.73□□□□□ -0.05
LIMS2-210ENST00000413578 KBTBD13C9JR72 458 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 SMIM22K7EJ46 135 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 GOLIM4O00461 696 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 AKR1B1P15121 316 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 LRRC41Q15345 812 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 SHHQ15465 462 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 TRIM60Q495X7 471 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 HSP90AB4PQ58FF6 505 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 FAM47AQ5JRC9 791 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 C9orf50Q5SZB4 431 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 ANO1Q5XXA6 986 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.72□□□□□ -0.05
LIMS2-210ENST00000413578 MAML3Q96JK9 1138 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 VCPKMTQ9H867 229 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 PRKAG2Q9UGJ0 569 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 ROBO3Q96MS0 1386 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 NAV1Q8NEY1 1877 aa14.72□□□□□ -0.05
LIMS2-210ENST00000413578 TRIM43BA6NCK2 446 aa14.71□□□□□ -0.05
LIMS2-210ENST00000413578 PRKAB2O43741 272 aa14.71□□□□□ -0.05
LIMS2-210ENST00000413578 FLOT1O75955 427 aa14.71□□□□□ -0.05
LIMS2-210ENST00000413578 ICA1Q05084 483 aa14.71□□□□□ -0.05
LIMS2-210ENST00000413578 TMEM132BQ14DG7 1078 aa14.71□□□□□ -0.05
LIMS2-210ENST00000413578 PRAMEF19Q5SWL8 479 aa14.71□□□□□ -0.05
LIMS2-210ENST00000413578 SH3RF1Q7Z6J0 888 aa14.71□□□□□ -0.05
LIMS2-210ENST00000413578 PANK1Q8TE04 598 aa14.71□□□□□ -0.05
LIMS2-210ENST00000413578 TRIM43Q96BQ3 446 aaPredicted RBP14.71□□□□□ -0.05
LIMS2-210ENST00000413578 FAM161BQ96MY7 647 aa14.71□□□□□ -0.05
LIMS2-210ENST00000413578 ARMT1Q9H993 441 aa14.71□□□□□ -0.05
LIMS2-210ENST00000413578 SLC5A4Q9NY91 659 aa14.71□□□□□ -0.05
LIMS2-210ENST00000413578 NRBP1Q9UHY1 535 aa14.71□□□□□ -0.05
LIMS2-210ENST00000413578 ZBED9Q6R2W3 1325 aa14.7□□□□□ -0.06
LIMS2-210ENST00000413578 WDR46O15213 610 aaKnown RBP14.7□□□□□ -0.06
LIMS2-210ENST00000413578 ADD2P35612 726 aa14.7□□□□□ -0.06
LIMS2-210ENST00000413578 SLFNL1Q499Z3 407 aa14.7□□□□□ -0.06
LIMS2-210ENST00000413578 ZNF697Q5TEC3 545 aa14.7□□□□□ -0.06
LIMS2-210ENST00000413578 C12orf60Q5U649 245 aa14.7□□□□□ -0.06
LIMS2-210ENST00000413578 NCAPG2Q86XI2 1143 aa14.7□□□□□ -0.06
LIMS2-210ENST00000413578 SIRT2Q8IXJ6 389 aa14.7□□□□□ -0.06
LIMS2-210ENST00000413578 SPICE1Q8N0Z3 855 aa14.7□□□□□ -0.06
LIMS2-210ENST00000413578 CLASRPQ8N2M8 674 aaKnown RBP14.7□□□□□ -0.06
LIMS2-210ENST00000413578 BADQ92934 168 aa14.7□□□□□ -0.06
LIMS2-210ENST00000413578 KIF1BPQ96EK5 621 aa14.7□□□□□ -0.06
LIMS2-210ENST00000413578 CCDC17Q96LX7 622 aa14.7□□□□□ -0.06
LIMS2-210ENST00000413578 DNAJC2Q99543 621 aaKnown RBP14.7□□□□□ -0.06
LIMS2-210ENST00000413578 ARHGEF10LQ9HCE6 1279 aa14.7□□□□□ -0.06
LIMS2-210ENST00000413578 ATP8A2Q9NTI2 1148 aa14.7□□□□□ -0.06
LIMS2-210ENST00000413578 PHF24Q9UPV7 400 aa14.7□□□□□ -0.06
LIMS2-210ENST00000413578 SLC25A27O95847 323 aa14.69□□□□□ -0.06
LIMS2-210ENST00000413578 FCER1AP12319 257 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms