RNA–Protein interactions for RNA: ENST00000413288.1

FAM238B-201, Transcript of family with sequence similarity 238 member B, humanhuman

TSL 3

Gene FAM238B, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238B-201ENST00000413288 SKOR2Q2VWA4 1001 aaPredicted RBP11.54□□□□□ -0.56
FAM238B-201ENST00000413288 CERKLQ49MI3 558 aaPredicted RBP11.54□□□□□ -0.56
FAM238B-201ENST00000413288 TBC1D10BQ4KMP7 808 aaPredicted RBP11.54□□□□□ -0.56
FAM238B-201ENST00000413288 SAMD7Q7Z3H4 446 aa11.54□□□□□ -0.56
FAM238B-201ENST00000413288 FOXP4Q8IVH2 680 aaPredicted RBP11.54□□□□□ -0.56
FAM238B-201ENST00000413288 MICALL2Q8IY33 904 aa11.54□□□□□ -0.56
FAM238B-201ENST00000413288 LRRC47Q8N1G4 583 aaKnown RBP11.54□□□□□ -0.56
FAM238B-201ENST00000413288 STAG2Q8N3U4 1231 aa11.54□□□□□ -0.56
FAM238B-201ENST00000413288 FAM151AQ8WW52 585 aa11.54□□□□□ -0.56
FAM238B-201ENST00000413288 ZBED3Q96IU2 234 aaPredicted RBP11.54□□□□□ -0.56
FAM238B-201ENST00000413288 CSRNP1Q96S65 589 aa11.54□□□□□ -0.56
FAM238B-201ENST00000413288 RNF26Q9BY78 433 aaPredicted RBP11.54□□□□□ -0.56
FAM238B-201ENST00000413288 CNOT7Q9UIV1 285 aaKnown RBP11.54□□□□□ -0.56
FAM238B-201ENST00000413288 SCAF8Q9UPN6 1271 aaKnown RBP11.54□□□□□ -0.56
FAM238B-201ENST00000413288 V9GY48 417 aaPredicted RBP11.54□□□□□ -0.56
FAM238B-201ENST00000413288 PRPF3O43395 683 aaKnown RBP11.53□□□□□ -0.56
FAM238B-201ENST00000413288 GDF11O95390 407 aa11.53□□□□□ -0.56
FAM238B-201ENST00000413288 GOLGA8HP0CJ92 632 aa11.53□□□□□ -0.56
FAM238B-201ENST00000413288 LMNB1P20700 586 aa11.53□□□□□ -0.56
FAM238B-201ENST00000413288 KIF5BP33176 963 aa11.53□□□□□ -0.56
FAM238B-201ENST00000413288 KIF23Q02241 960 aaPredicted RBP11.53□□□□□ -0.56
FAM238B-201ENST00000413288 CEBPZQ03701 1054 aaKnown RBP11.53□□□□□ -0.56
FAM238B-201ENST00000413288 GPT2Q8TD30 523 aa11.53□□□□□ -0.56
FAM238B-201ENST00000413288 CCDC17Q96LX7 622 aa11.53□□□□□ -0.56
FAM238B-201ENST00000413288 TMEM39BQ9GZU3 492 aa11.53□□□□□ -0.56
FAM238B-201ENST00000413288 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.53□□□□□ -0.56
FAM238B-201ENST00000413288 MTMR4Q9NYA4 1195 aa11.53□□□□□ -0.56
FAM238B-201ENST00000413288 CLIP2Q9UDT6 1046 aa11.53□□□□□ -0.56
FAM238B-201ENST00000413288 MAD2L2Q9UI95 211 aa11.53□□□□□ -0.56
FAM238B-201ENST00000413288 KCNJ14Q9UNX9 436 aa11.53□□□□□ -0.56
FAM238B-201ENST00000413288 TTLL1O95922 423 aa11.52□□□□□ -0.57
FAM238B-201ENST00000413288 YBX3P16989 372 aaKnown RBP eCLIP11.52□□□□□ -0.57
FAM238B-201ENST00000413288 NOVP48745 357 aa11.52□□□□□ -0.57
FAM238B-201ENST00000413288 ZNF280AP59817 542 aaPredicted RBP11.52□□□□□ -0.57
FAM238B-201ENST00000413288 GNL2Q13823 731 aaKnown RBP11.52□□□□□ -0.57
FAM238B-201ENST00000413288 PKN1Q16512 942 aa11.52□□□□□ -0.57
FAM238B-201ENST00000413288 TATDN1Q6P1N9 297 aa11.52□□□□□ -0.57
FAM238B-201ENST00000413288 USP17L2Q6R6M4 530 aa11.52□□□□□ -0.57
FAM238B-201ENST00000413288 CDAN1Q8IWY9 1227 aa11.52□□□□□ -0.57
FAM238B-201ENST00000413288 TMEM87AQ8NBN3 555 aa11.52□□□□□ -0.57
FAM238B-201ENST00000413288 ZNF396Q96N95 335 aaPredicted RBP11.52□□□□□ -0.57
FAM238B-201ENST00000413288 MAP3K14Q99558 947 aa11.52□□□□□ -0.57
FAM238B-201ENST00000413288 CPVLQ9H3G5 476 aa11.52□□□□□ -0.57
FAM238B-201ENST00000413288 VPS54Q9P1Q0 977 aa11.52□□□□□ -0.57
FAM238B-201ENST00000413288 RBM27Q9P2N5 1060 aaKnown RBP11.52□□□□□ -0.57
FAM238B-201ENST00000413288 ASTN2O75129 1339 aaPredicted RBP11.52□□□□□ -0.57
FAM238B-201ENST00000413288 FRMPD2Q68DX3 1309 aaPredicted RBP11.52□□□□□ -0.57
FAM238B-201ENST00000413288 PALM3A6NDB9 673 aaPredicted RBP11.51□□□□□ -0.57
FAM238B-201ENST00000413288 USP17L5A8MUK1 530 aa11.51□□□□□ -0.57
FAM238B-201ENST00000413288 PARP1P09874 1014 aaKnown RBP11.51□□□□□ -0.57
FAM238B-201ENST00000413288 TNNI2P48788 182 aa11.51□□□□□ -0.57
FAM238B-201ENST00000413288 GNAQP50148 359 aa11.51□□□□□ -0.57
FAM238B-201ENST00000413288 RRP1BQ14684 758 aaKnown RBP11.51□□□□□ -0.57
FAM238B-201ENST00000413288 SEPT2Q15019 361 aa11.51□□□□□ -0.57
FAM238B-201ENST00000413288 CSPP1Q1MSJ5 1256 aa11.51□□□□□ -0.57
FAM238B-201ENST00000413288 ABCB5Q2M3G0 1257 aa11.51□□□□□ -0.57
FAM238B-201ENST00000413288 KLHL40Q2TBA0 621 aa11.51□□□□□ -0.57
FAM238B-201ENST00000413288 KIF4BQ2VIQ3 1234 aa11.51□□□□□ -0.57
FAM238B-201ENST00000413288 DPF2Q92785 391 aa11.51□□□□□ -0.57
FAM238B-201ENST00000413288 SHISA4Q96DD7 197 aa11.51□□□□□ -0.57
FAM238B-201ENST00000413288 SPATA32Q96LK8 384 aa11.51□□□□□ -0.57
FAM238B-201ENST00000413288 FTOQ9C0B1 505 aaKnown RBP eCLIP11.51□□□□□ -0.57
FAM238B-201ENST00000413288 RNF181Q9P0P0 153 aa11.51□□□□□ -0.57
FAM238B-201ENST00000413288 KLRF2D3W0D1 207 aa11.5□□□□□ -0.57
FAM238B-201ENST00000413288 H7C1D1 291 aa11.5□□□□□ -0.57
FAM238B-201ENST00000413288 RAD21O60216 631 aa11.5□□□□□ -0.57
FAM238B-201ENST00000413288 MMP1P03956 469 aa11.5□□□□□ -0.57
FAM238B-201ENST00000413288 EEF2P13639 858 aaKnown RBP11.5□□□□□ -0.57
FAM238B-201ENST00000413288 JAG1P78504 1218 aa11.5□□□□□ -0.57
FAM238B-201ENST00000413288 SAFBQ15424 915 aaKnown RBP eCLIP11.5□□□□□ -0.57
FAM238B-201ENST00000413288 SLC35G1Q2M3R5 365 aa11.5□□□□□ -0.57
FAM238B-201ENST00000413288 FKBP1CQ5VVH2 108 aa11.5□□□□□ -0.57
FAM238B-201ENST00000413288 CAVIN1Q6NZI2 390 aaKnown RBP11.5□□□□□ -0.57
FAM238B-201ENST00000413288 MIGA2Q7L4E1 593 aa11.5□□□□□ -0.57
FAM238B-201ENST00000413288 FAM83AQ86UY5 434 aa11.5□□□□□ -0.57
FAM238B-201ENST00000413288 METTL16Q86W50 562 aaKnown RBP11.5□□□□□ -0.57
FAM238B-201ENST00000413288 LEO1Q8WVC0 666 aaPredicted RBP11.5□□□□□ -0.57
FAM238B-201ENST00000413288 USP28Q96RU2 1077 aa11.5□□□□□ -0.57
FAM238B-201ENST00000413288 CABP5Q9NP86 173 aa11.5□□□□□ -0.57
FAM238B-201ENST00000413288 GPCPD1Q9NPB8 672 aa11.5□□□□□ -0.57
FAM238B-201ENST00000413288 HERC5Q9UII4 1024 aaKnown RBP11.5□□□□□ -0.57
FAM238B-201ENST00000413288 HACL1Q9UJ83 578 aa11.5□□□□□ -0.57
FAM238B-201ENST00000413288 DOCK1Q14185 1865 aa11.5□□□□□ -0.57
FAM238B-201ENST00000413288 BTBD18B2RXH4 712 aa11.49□□□□□ -0.57
FAM238B-201ENST00000413288 CYTH3O43739 400 aa11.49□□□□□ -0.57
FAM238B-201ENST00000413288 MBD3O95983 291 aa11.49□□□□□ -0.57
FAM238B-201ENST00000413288 GH2P01242 217 aa11.49□□□□□ -0.57
FAM238B-201ENST00000413288 PDHBP11177 359 aa11.49□□□□□ -0.57
FAM238B-201ENST00000413288 SCG2P13521 617 aa11.49□□□□□ -0.57
FAM238B-201ENST00000413288 VEGFAP15692 232 aaPredicted RBP11.49□□□□□ -0.57
FAM238B-201ENST00000413288 XBP1P17861 261 aa11.49□□□□□ -0.57
FAM238B-201ENST00000413288 MMP14P50281 582 aa11.49□□□□□ -0.57
FAM238B-201ENST00000413288 ICA1Q05084 483 aa11.49□□□□□ -0.57
FAM238B-201ENST00000413288 RASA3Q14644 834 aa11.49□□□□□ -0.57
FAM238B-201ENST00000413288 GSE1Q14687 1217 aa11.49□□□□□ -0.57
FAM238B-201ENST00000413288 PFKFB3Q16875 520 aaPredicted RBP11.49□□□□□ -0.57
FAM238B-201ENST00000413288 CCDC96Q2M329 555 aa11.49□□□□□ -0.57
FAM238B-201ENST00000413288 MYSM1Q5VVJ2 828 aa11.49□□□□□ -0.57
FAM238B-201ENST00000413288 TMEM179Q6ZVK1 233 aa11.49□□□□□ -0.57
FAM238B-201ENST00000413288 BRAPQ7Z569 592 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms