RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 ATP2C1P98194 919 aaPredicted RBP13.09□□□□□ -0.31
TRAFD1-202ENST00000412615 TFAP4Q01664 338 aa13.09□□□□□ -0.31
TRAFD1-202ENST00000412615 ANKS1AQ92625 1134 aa13.09□□□□□ -0.31
TRAFD1-202ENST00000412615 XDHP47989 1333 aa13.09□□□□□ -0.31
TRAFD1-202ENST00000412615 ZNF18P17022 549 aa13.08□□□□□ -0.31
TRAFD1-202ENST00000412615 CALML3P27482 149 aa13.08□□□□□ -0.31
TRAFD1-202ENST00000412615 PLCD1P51178 756 aa13.08□□□□□ -0.31
TRAFD1-202ENST00000412615 FMR1Q06787 632 aaKnown RBP eCLIP13.08□□□□□ -0.314e-6■■□□□ 13.3
TRAFD1-202ENST00000412615 PTGDRQ13258 359 aa13.08□□□□□ -0.31
TRAFD1-202ENST00000412615 ZNF804AQ7Z570 1209 aa13.08□□□□□ -0.31
TRAFD1-202ENST00000412615 SH3RF1Q7Z6J0 888 aa13.08□□□□□ -0.31
TRAFD1-202ENST00000412615 CNBD1Q8NA66 436 aa13.08□□□□□ -0.31
TRAFD1-202ENST00000412615 PPP1R13BQ96KQ4 1090 aa13.08□□□□□ -0.31
TRAFD1-202ENST00000412615 PPP4CP60510 307 aa13.08□□□□□ -0.32
TRAFD1-202ENST00000412615 NFIXQ14938 502 aa13.08□□□□□ -0.32
TRAFD1-202ENST00000412615 ZNF827Q17R98 1081 aa13.08□□□□□ -0.32
TRAFD1-202ENST00000412615 PDCL2Q8N4E4 241 aa13.08□□□□□ -0.32
TRAFD1-202ENST00000412615 PAGE5Q96GU1 130 aa13.08□□□□□ -0.32
TRAFD1-202ENST00000412615 PYM1Q9BRP8 204 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-202ENST00000412615 TMX1Q9H3N1 280 aa13.08□□□□□ -0.32
TRAFD1-202ENST00000412615 MKNK2Q9HBH9 465 aa13.08□□□□□ -0.32
TRAFD1-202ENST00000412615 LAMB1P07942 1786 aa13.08□□□□□ -0.32
TRAFD1-202ENST00000412615 CCDC88AQ3V6T2 1871 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 A0A087X0B3 334 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 GNAQP50148 359 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 FAM182BQ5T319 152 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 PIK3AP1Q6ZUJ8 805 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 C15orf52Q6ZUT6 534 aaKnown RBP13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 CERS3Q8IU89 383 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 GSDMAQ96QA5 445 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 CCDC94Q9BW85 323 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 SH3GLB2Q9NR46 395 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 NHSQ6T4R5 1651 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 VWA3AA6NCI4 1184 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 TMEM232C9JQI7 657 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 WNT7AO00755 349 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 AFMP43652 599 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 NOM1Q5C9Z4 860 aaKnown RBP13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 ZNF444Q8N0Y2 327 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 PNMA1Q8ND90 353 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 SH3RF3Q8TEJ3 882 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 IL17RBQ9NRM6 502 aa13.07□□□□□ -0.32
TRAFD1-202ENST00000412615 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 NCBP1Q09161 790 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 FAM196AQ6ZSG2 479 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 TCP11L1Q9NUJ3 509 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 INTS13Q9NVM9 706 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 KIAA1551Q9HCM1 1747 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 ROBO3Q96MS0 1386 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 DPYDQ12882 1025 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 SLC4A8Q2Y0W8 1093 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 HSP90AA4PQ58FG1 418 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 FCHSD1Q86WN1 690 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 TRMT44Q8IYL2 757 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 BLIDQ8IZY5 108 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 IQUBQ8NA54 791 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 TULP1O00294 542 aaPredicted RBP13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 TSPY3P0CV98 308 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 TSPY8P0CW00 308 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 ADRA2BP18089 450 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 TBX2Q13207 712 aaPredicted RBP13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 GRM4Q14833 912 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 SPECC1LQ69YQ0 1117 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 DYNLL2Q96FJ2 89 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 ZNF287Q9HBT7 754 aa13.06□□□□□ -0.32
TRAFD1-202ENST00000412615 MCM7P33993 719 aa13.05□□□□□ -0.32
TRAFD1-202ENST00000412615 DIXDC1Q155Q3 683 aa13.05□□□□□ -0.32
TRAFD1-202ENST00000412615 SPATA1Q5VX52 437 aa13.05□□□□□ -0.32
TRAFD1-202ENST00000412615 ARL6IP4Q66PJ3 421 aaKnown RBP13.05□□□□□ -0.32
TRAFD1-202ENST00000412615 TGFBRAP1Q8WUH2 860 aa13.05□□□□□ -0.32
TRAFD1-202ENST00000412615 MED15Q96RN5 788 aa13.05□□□□□ -0.32
TRAFD1-202ENST00000412615 SAMSN1Q9NSI8 373 aaKnown RBP13.05□□□□□ -0.32
TRAFD1-202ENST00000412615 PCDHA4Q9UN74 947 aa13.05□□□□□ -0.32
TRAFD1-202ENST00000412615 ARHGAP6O43182 974 aa13.05□□□□□ -0.32
TRAFD1-202ENST00000412615 VEGFAP15692 232 aaPredicted RBP13.05□□□□□ -0.32
TRAFD1-202ENST00000412615 TNRC6CQ9HCJ0 1690 aaKnown RBP13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 THSD7AQ9UPZ6 1657 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 ATP2B4P23634 1241 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 NR1I3Q14994 352 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 PPP4R3BQ5MIZ7 849 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 GALNT17Q6IS24 598 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 PRR5LQ6MZQ0 368 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 HOMER1Q86YM7 354 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 ZSCAN12O43309 604 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 SLU7O95391 586 aaKnown RBP13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 LONP1P36776 959 aaKnown RBP13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 CUL4BQ13620 913 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 E2F4Q16254 413 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 SYT10Q6XYQ8 523 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 STAG2Q8N3U4 1231 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 CCDC148Q8NFR7 591 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 CERKQ8TCT0 537 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 ERO1AQ96HE7 468 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 LZTS2Q9BRK4 669 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 CD209Q9NNX6 404 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 MAD2L2Q9UI95 211 aa13.04□□□□□ -0.32
TRAFD1-202ENST00000412615 A0A1B0GTH6 734 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 USP17L3A6NCW0 530 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms