RNA–Protein interactions for RNA: ENST00000410041.1

DYSF-209, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-209ENST00000410041 SPATA5Q8NB90 893 aa14.34□□□□□ -0.11
DYSF-209ENST00000410041 PCDH11XQ9BZA7 1347 aa14.34□□□□□ -0.11
DYSF-209ENST00000410041 PCDH11YQ9BZA8 1340 aa14.34□□□□□ -0.11
DYSF-209ENST00000410041 SPOPO43791 374 aa14.34□□□□□ -0.11
DYSF-209ENST00000410041 CCNT1O60563 726 aaKnown RBP14.34□□□□□ -0.11
DYSF-209ENST00000410041 EEF2P13639 858 aaKnown RBP14.34□□□□□ -0.11
DYSF-209ENST00000410041 TSNAXIP1Q2TAA8 658 aa14.34□□□□□ -0.11
DYSF-209ENST00000410041 NBPF5PQ86XG9 351 aaPredicted RBP14.34□□□□□ -0.11
DYSF-209ENST00000410041 STMN2Q93045 179 aa14.34□□□□□ -0.11
DYSF-209ENST00000410041 ABCB6Q9NP58 842 aa14.34□□□□□ -0.11
DYSF-209ENST00000410041 NLRC4Q9NPP4 1024 aa14.34□□□□□ -0.11
DYSF-209ENST00000410041 IGSF1Q8N6C5 1336 aa14.34□□□□□ -0.11
DYSF-209ENST00000410041 DDIT3P35638 169 aa14.34□□□□□ -0.11
DYSF-209ENST00000410041 MRPL12P52815 198 aaKnown RBP14.34□□□□□ -0.11
DYSF-209ENST00000410041 EPHB4P54760 987 aa14.34□□□□□ -0.11
DYSF-209ENST00000410041 TRMT1LQ7Z2T5 733 aaKnown RBP14.34□□□□□ -0.11
DYSF-209ENST00000410041 HDAC9Q9UKV0 1011 aa14.34□□□□□ -0.11
DYSF-209ENST00000410041 hCG_1642624A0A1W2PR95 340 aa14.33□□□□□ -0.11
DYSF-209ENST00000410041 SPDYE3A6NKU9 549 aa14.33□□□□□ -0.11
DYSF-209ENST00000410041 GBP1P32455 592 aa14.33□□□□□ -0.11
DYSF-209ENST00000410041 CEP128Q6ZU80 1094 aa14.33□□□□□ -0.11
DYSF-209ENST00000410041 RAB17Q9H0T7 212 aa14.33□□□□□ -0.11
DYSF-209ENST00000410041 PDE8AO60658 829 aa14.33□□□□□ -0.12
DYSF-209ENST00000410041 GPIHBP1Q8IV16 184 aa14.33□□□□□ -0.12
DYSF-209ENST00000410041 ANKRD7Q92527 254 aa14.33□□□□□ -0.12
DYSF-209ENST00000410041 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.33□□□□□ -0.12
DYSF-209ENST00000410041 ENC1O14682 589 aa14.33□□□□□ -0.12
DYSF-209ENST00000410041 NEBLO76041 1014 aa14.33□□□□□ -0.12
DYSF-209ENST00000410041 APOA5Q6Q788 366 aa14.33□□□□□ -0.12
DYSF-209ENST00000410041 SNX29Q8TEQ0 813 aa14.33□□□□□ -0.12
DYSF-209ENST00000410041 GJC1P36383 396 aa14.33□□□□□ -0.12
DYSF-209ENST00000410041 FOXP1Q9H334 677 aaPredicted RBP14.33□□□□□ -0.12
DYSF-209ENST00000410041 PTPN21Q16825 1174 aa14.33□□□□□ -0.12
DYSF-209ENST00000410041 SYMPKQ92797 1274 aaKnown RBP14.33□□□□□ -0.12
DYSF-209ENST00000410041 SH3TC1Q8TE82 1336 aa14.33□□□□□ -0.12
DYSF-209ENST00000410041 USP27XA6NNY8 438 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 IFNL3Q8IZI9 196 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 KCNF1Q9H3M0 494 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 MAST3O60307 1309 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 SOWAHDA6NJG2 315 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 DYMQ7RTS9 669 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 BPIFA3Q9BQP9 254 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 MAN1B1Q9UKM7 699 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 NCOA3Q9Y6Q9 1424 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 RPN1P04843 607 aaKnown RBP14.32□□□□□ -0.12
DYSF-209ENST00000410041 EEF1GP26641 437 aaKnown RBP14.32□□□□□ -0.12
DYSF-209ENST00000410041 MAGEA9P43362 315 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 PPARAQ07869 468 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 HERC4Q5GLZ8 1057 aaPredicted RBP14.32□□□□□ -0.12
DYSF-209ENST00000410041 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.32□□□□□ -0.12
DYSF-209ENST00000410041 PDE6AP16499 860 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 TOB2Q14106 344 aaPredicted RBP14.32□□□□□ -0.12
DYSF-209ENST00000410041 PPP2R5EQ16537 467 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 HAUS3Q68CZ6 603 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 BICD1Q96G01 975 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 FRMD4BQ9Y2L6 1034 aa14.32□□□□□ -0.12
DYSF-209ENST00000410041 CDK12Q9NYV4 1490 aaPredicted RBP14.32□□□□□ -0.12
DYSF-209ENST00000410041 SLFN14P0C7P3 912 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 ATP2A2P16615 1042 aaKnown RBP14.31□□□□□ -0.12
DYSF-209ENST00000410041 ARID4AP29374 1257 aaPredicted RBP14.31□□□□□ -0.12
DYSF-209ENST00000410041 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.31□□□□□ -0.12
DYSF-209ENST00000410041 CSRNP2Q9H175 543 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 PLEKHA4Q9H4M7 779 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 MED23Q9ULK4 1368 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 RGS16O15492 202 aaPredicted RBP14.31□□□□□ -0.12
DYSF-209ENST00000410041 A1BGP04217 495 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 PPARDQ03181 441 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 DENND2CQ68D51 928 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 PAF1Q8N7H5 531 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 ACRBPQ8NEB7 543 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 TRPM1Q7Z4N2 1603 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 FYB2Q5VWT5 728 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 SAMSN1Q9NSI8 373 aaKnown RBP14.31□□□□□ -0.12
DYSF-209ENST00000410041 ARHGAP31Q2M1Z3 1444 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 CALUO43852 315 aaPredicted RBP14.31□□□□□ -0.12
DYSF-209ENST00000410041 ZSCAN20P17040 1043 aaPredicted RBP14.31□□□□□ -0.12
DYSF-209ENST00000410041 RETREG2Q8NC44 543 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 LDHBP07195 334 aaKnown RBP14.31□□□□□ -0.12
DYSF-209ENST00000410041 FNBP4Q8N3X1 1017 aaPredicted RBP14.31□□□□□ -0.12
DYSF-209ENST00000410041 DNAI2Q9GZS0 605 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 CTTNBP2NLQ9P2B4 639 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 UBE3CQ15386 1083 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 LZTS2Q9BRK4 669 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 ANKRD2Q9GZV1 360 aa14.31□□□□□ -0.12
DYSF-209ENST00000410041 SNCBQ16143 134 aa14.3□□□□□ -0.12
DYSF-209ENST00000410041 KCTD16Q68DU8 428 aa14.3□□□□□ -0.12
DYSF-209ENST00000410041 ZNF804AQ7Z570 1209 aa14.3□□□□□ -0.12
DYSF-209ENST00000410041 HOMER3Q9NSC5 361 aa14.3□□□□□ -0.12
DYSF-209ENST00000410041 KCNK3O14649 394 aa14.3□□□□□ -0.12
DYSF-209ENST00000410041 GNA14O95837 355 aa14.3□□□□□ -0.12
DYSF-209ENST00000410041 GUCY2DQ02846 1103 aa14.3□□□□□ -0.12
DYSF-209ENST00000410041 ZNF365Q70YC5 407 aa14.3□□□□□ -0.12
DYSF-209ENST00000410041 SREK1Q8WXA9 508 aaKnown RBP14.3□□□□□ -0.12
DYSF-209ENST00000410041 MROH5Q6ZUA9 1318 aa14.3□□□□□ -0.12
DYSF-209ENST00000410041 SAMD9LQ8IVG5 1584 aa14.3□□□□□ -0.12
DYSF-209ENST00000410041 ERCC3P19447 782 aa14.3□□□□□ -0.12
DYSF-209ENST00000410041 ICE2Q659A1 982 aa14.3□□□□□ -0.12
DYSF-209ENST00000410041 PARP2Q9UGN5 583 aa14.3□□□□□ -0.12
DYSF-209ENST00000410041 RIPOR2Q9Y4F9 1068 aa14.3□□□□□ -0.12
DYSF-209ENST00000410041 CCDC160A6NGH7 325 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms