RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.7□□□□□ -0.06
PMS1-204ENST00000409823 DDX11Q96FC9 970 aa14.7□□□□□ -0.06
PMS1-204ENST00000409823 USP17L5A8MUK1 530 aa14.7□□□□□ -0.06
PMS1-204ENST00000409823 CELF2O95319 508 aaKnown RBP14.7□□□□□ -0.06
PMS1-204ENST00000409823 STAG2Q8N3U4 1231 aa14.7□□□□□ -0.06
PMS1-204ENST00000409823 FANCBQ8NB91 859 aa14.7□□□□□ -0.06
PMS1-204ENST00000409823 PIBF1Q8WXW3 757 aa14.7□□□□□ -0.06
PMS1-204ENST00000409823 PICK1Q9NRD5 415 aa14.7□□□□□ -0.06
PMS1-204ENST00000409823 ZNF112Q9UJU3 913 aa14.7□□□□□ -0.06
PMS1-204ENST00000409823 FRMPD2Q68DX3 1309 aaPredicted RBP14.7□□□□□ -0.06
PMS1-204ENST00000409823 TRIM75PA6NK02 468 aa14.69□□□□□ -0.06
PMS1-204ENST00000409823 CHADLQ6NUI6 762 aa14.69□□□□□ -0.06
PMS1-204ENST00000409823 SCYL3Q8IZE3 742 aa14.69□□□□□ -0.06
PMS1-204ENST00000409823 PHKBQ93100 1093 aa14.69□□□□□ -0.06
PMS1-204ENST00000409823 NUP88Q99567 741 aaPredicted RBP14.69□□□□□ -0.06
PMS1-204ENST00000409823 FAM217BQ9NTX9 383 aaPredicted RBP14.69□□□□□ -0.06
PMS1-204ENST00000409823 ZHX2Q9Y6X8 837 aa14.69□□□□□ -0.06
PMS1-204ENST00000409823 KIF3CO14782 793 aa14.69□□□□□ -0.06
PMS1-204ENST00000409823 CPLX1O14810 134 aa14.69□□□□□ -0.06
PMS1-204ENST00000409823 RTN1Q16799 776 aa14.69□□□□□ -0.06
PMS1-204ENST00000409823 CCDC178Q5BJE1 867 aa14.69□□□□□ -0.06
PMS1-204ENST00000409823 ANKS1AQ92625 1134 aa14.69□□□□□ -0.06
PMS1-204ENST00000409823 ELP3Q9H9T3 547 aa14.69□□□□□ -0.06
PMS1-204ENST00000409823 hCG_1642624A0A1W2PR95 340 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 PLEKHA8P1O95397 391 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 CTDNEP1O95476 244 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 ITGBL1O95965 494 aaPredicted RBP14.68□□□□□ -0.06
PMS1-204ENST00000409823 PTPRAP18433 802 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 IREB2P48200 963 aaKnown RBP14.68□□□□□ -0.06
PMS1-204ENST00000409823 NOVP48745 357 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 NT5C2P49902 561 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 MAP3K9P80192 1104 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 CUL4AQ13619 759 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 KIAA1755Q5JYT7 1200 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 FEZ1Q99689 392 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 SPP2Q13103 211 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 KCTD1Q719H9 257 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 NYAP2Q9P242 653 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 F5H6K3 240 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 KLRC3Q07444 240 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 NBPF11Q86T75 865 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 CTCFLQ8NI51 663 aaPredicted RBP14.68□□□□□ -0.06
PMS1-204ENST00000409823 CSADQ9Y600 493 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 SNCAIPQ9Y6H5 919 aa14.68□□□□□ -0.06
PMS1-204ENST00000409823 PDHBP11177 359 aa14.67□□□□□ -0.06
PMS1-204ENST00000409823 FOSBP53539 338 aa14.67□□□□□ -0.06
PMS1-204ENST00000409823 MTMR2Q13614 643 aa14.67□□□□□ -0.06
PMS1-204ENST00000409823 CST9Q5W186 159 aa14.67□□□□□ -0.06
PMS1-204ENST00000409823 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
PMS1-204ENST00000409823 IL27Q8NEV9 243 aa14.67□□□□□ -0.06
PMS1-204ENST00000409823 ARHGEF10LQ9HCE6 1279 aa14.67□□□□□ -0.06
PMS1-204ENST00000409823 GPCPD1Q9NPB8 672 aa14.67□□□□□ -0.06
PMS1-204ENST00000409823 DDAH1O94760 285 aa14.67□□□□□ -0.06
PMS1-204ENST00000409823 ZNF784Q8NCA9 323 aaPredicted RBP14.67□□□□□ -0.06
PMS1-204ENST00000409823 UBA5Q9GZZ9 404 aa14.67□□□□□ -0.06
PMS1-204ENST00000409823 MAD2L2Q9UI95 211 aa14.67□□□□□ -0.06
PMS1-204ENST00000409823 BAZ2BQ9UIF8 2168 aaKnown RBP14.66□□□□□ -0.06
PMS1-204ENST00000409823 CCDC96Q2M329 555 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 SLFN13Q68D06 897 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 NSUN7Q8NE18 718 aaKnown RBP14.66□□□□□ -0.06
PMS1-204ENST00000409823 MKL1Q969V6 931 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 OTUD5Q96G74 571 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 SMC3Q9UQE7 1217 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 PTPDC1A2A3K4 754 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 NDUFB10O96000 172 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 GJB2P29033 226 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 SLC16A2P36021 539 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 SLC1A4P43007 532 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 MKRN3Q13064 507 aaKnown RBP14.66□□□□□ -0.06
PMS1-204ENST00000409823 TTBK2Q6IQ55 1244 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 ARMC9Q7Z3E5 817 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 ANKRD13AQ8IZ07 590 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 VAT1LQ9HCJ6 419 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 TMX2Q9Y320 296 aa14.66□□□□□ -0.06
PMS1-204ENST00000409823 GREB1LQ9C091 1923 aaPredicted RBP14.66□□□□□ -0.06
PMS1-204ENST00000409823 PARP1P09874 1014 aaKnown RBP14.65□□□□□ -0.06
PMS1-204ENST00000409823 SRBD1Q8N5C6 995 aaKnown RBP14.65□□□□□ -0.06
PMS1-204ENST00000409823 GBA2Q9HCG7 927 aaPredicted RBP14.65□□□□□ -0.06
PMS1-204ENST00000409823 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.65□□□□□ -0.06
PMS1-204ENST00000409823 CALM1P0DP23 149 aa14.65□□□□□ -0.06
PMS1-204ENST00000409823 CALM2P0DP24 149 aa14.65□□□□□ -0.06
PMS1-204ENST00000409823 CALM3P0DP25 149 aa14.65□□□□□ -0.06
PMS1-204ENST00000409823 NTRK3Q16288 839 aa14.65□□□□□ -0.06
PMS1-204ENST00000409823 SLC26A6Q9BXS9 759 aa14.65□□□□□ -0.06
PMS1-204ENST00000409823 KLRF2D3W0D1 207 aa14.64□□□□□ -0.07
PMS1-204ENST00000409823 DHX16O60231 1041 aaKnown RBP14.64□□□□□ -0.07
PMS1-204ENST00000409823 GRM4Q14833 912 aa14.64□□□□□ -0.07
PMS1-204ENST00000409823 ZNF280CQ8ND82 737 aa14.64□□□□□ -0.07
PMS1-204ENST00000409823 AIFM3Q96NN9 605 aa14.64□□□□□ -0.07
PMS1-204ENST00000409823 GJB4Q9NTQ9 266 aa14.64□□□□□ -0.07
PMS1-204ENST00000409823 USP17L10C9JJH3 530 aa14.64□□□□□ -0.07
PMS1-204ENST00000409823 HMGCS2P54868 508 aa14.64□□□□□ -0.07
PMS1-204ENST00000409823 PKP1Q13835 747 aa14.64□□□□□ -0.07
PMS1-204ENST00000409823 MYH4Q9Y623 1939 aa14.64□□□□□ -0.07
PMS1-204ENST00000409823 IRF6O14896 467 aa14.63□□□□□ -0.07
PMS1-204ENST00000409823 KIF5BP33176 963 aa14.63□□□□□ -0.07
PMS1-204ENST00000409823 IKQ13123 557 aaPredicted RBP14.63□□□□□ -0.07
PMS1-204ENST00000409823 SLC35G1Q2M3R5 365 aa14.63□□□□□ -0.07
PMS1-204ENST00000409823 PPP4R3BQ5MIZ7 849 aa14.63□□□□□ -0.07
PMS1-204ENST00000409823 FAM83BQ5T0W9 1011 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms