RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 SEPT2Q15019 361 aa20.58■□□□□ 0.89
SCRN1-203ENST00000409570 C9orf50Q5SZB4 431 aa20.58■□□□□ 0.89
SCRN1-203ENST00000409570 ANO1Q5XXA6 986 aa20.58■□□□□ 0.89
SCRN1-203ENST00000409570 SLC39A5Q6ZMH5 540 aa20.58■□□□□ 0.89
SCRN1-203ENST00000409570 DPP9Q86TI2 863 aa20.58■□□□□ 0.89
SCRN1-203ENST00000409570 ARRDC4Q8NCT1 418 aa20.58■□□□□ 0.89
SCRN1-203ENST00000409570 C1orf115Q9H7X2 142 aa20.58■□□□□ 0.89
SCRN1-203ENST00000409570 PLXNA1Q9UIW2 1896 aa20.58■□□□□ 0.88
SCRN1-203ENST00000409570 A0A1W2PRG0 241 aa20.57■□□□□ 0.88
SCRN1-203ENST00000409570 GABPAQ06546 454 aa20.57■□□□□ 0.88
SCRN1-203ENST00000409570 SNX17Q15036 470 aa20.57■□□□□ 0.88
SCRN1-203ENST00000409570 CDX2Q99626 313 aaPredicted RBP20.57■□□□□ 0.88
SCRN1-203ENST00000409570 RIOK1Q9BRS2 568 aaKnown RBP20.57■□□□□ 0.88
SCRN1-203ENST00000409570 SPTBN5Q9NRC6 3674 aaKnown RBP20.57■□□□□ 0.88
SCRN1-203ENST00000409570 KBTBD13C9JR72 458 aa20.56■□□□□ 0.88
SCRN1-203ENST00000409570 SEPT4O43236 478 aa20.56■□□□□ 0.88
SCRN1-203ENST00000409570 STRNO43815 780 aa20.56■□□□□ 0.88
SCRN1-203ENST00000409570 COBLO75128 1261 aa20.56■□□□□ 0.88
SCRN1-203ENST00000409570 EVX2Q03828 476 aa20.56■□□□□ 0.88
SCRN1-203ENST00000409570 MAP3K12Q12852 859 aa20.56■□□□□ 0.88
SCRN1-203ENST00000409570 COG2Q14746 738 aa20.56■□□□□ 0.88
SCRN1-203ENST00000409570 SHCBP1Q8NEM2 672 aa20.56■□□□□ 0.88
SCRN1-203ENST00000409570 SPATC1LQ9H0A9 340 aa20.56■□□□□ 0.88
SCRN1-203ENST00000409570 SEMA6BQ9H3T3 888 aa20.56■□□□□ 0.88
SCRN1-203ENST00000409570 BAZ2AQ9UIF9 1905 aaKnown RBP20.55■□□□□ 0.88
SCRN1-203ENST00000409570 ERCC3P19447 782 aa20.55■□□□□ 0.88
SCRN1-203ENST00000409570 TRIM60Q495X7 471 aa20.55■□□□□ 0.88
SCRN1-203ENST00000409570 ZKSCAN2Q63HK3 967 aa20.55■□□□□ 0.88
SCRN1-203ENST00000409570 TMED8Q6PL24 325 aaPredicted RBP20.55■□□□□ 0.88
SCRN1-203ENST00000409570 BADQ92934 168 aa20.55■□□□□ 0.88
SCRN1-203ENST00000409570 PRDM5Q9NQX1 630 aaPredicted RBP20.55■□□□□ 0.88
SCRN1-203ENST00000409570 HOXC10Q9NYD6 342 aa20.55■□□□□ 0.88
SCRN1-203ENST00000409570 POLR3DP05423 398 aaPredicted RBP20.54■□□□□ 0.88
SCRN1-203ENST00000409570 KIAA1755Q5JYT7 1200 aa20.54■□□□□ 0.88
SCRN1-203ENST00000409570 PRAMEF19Q5SWL8 479 aa20.54■□□□□ 0.88
SCRN1-203ENST00000409570 SH3RF1Q7Z6J0 888 aa20.54■□□□□ 0.88
SCRN1-203ENST00000409570 PDLIM7Q9NR12 457 aa20.54■□□□□ 0.88
SCRN1-203ENST00000409570 TTC28Q96AY4 2481 aa20.54■□□□□ 0.88
SCRN1-203ENST00000409570 LRRC41Q15345 812 aa20.53■□□□□ 0.88
SCRN1-203ENST00000409570 MAFAQ8NHW3 353 aaPredicted RBP20.53■□□□□ 0.88
SCRN1-203ENST00000409570 TANGO6Q9C0B7 1094 aa20.53■□□□□ 0.88
SCRN1-203ENST00000409570 MAGEB6P1A0A0J9YX57 407 aa20.52■□□□□ 0.88
SCRN1-203ENST00000409570 TRIM43BA6NCK2 446 aa20.52■□□□□ 0.88
SCRN1-203ENST00000409570 MPHOSPH10O00566 681 aaKnown RBP20.52■□□□□ 0.88
SCRN1-203ENST00000409570 MYCNP04198 464 aaPredicted RBP20.52■□□□□ 0.88
SCRN1-203ENST00000409570 DSG3P32926 999 aa20.52■□□□□ 0.88
SCRN1-203ENST00000409570 ADCYAP1R1P41586 468 aa20.52■□□□□ 0.88
SCRN1-203ENST00000409570 TRIM43Q96BQ3 446 aaPredicted RBP20.52■□□□□ 0.88
SCRN1-203ENST00000409570 TTYH1Q9H313 450 aaPredicted RBP20.52■□□□□ 0.88
SCRN1-203ENST00000409570 MYO9BQ13459 2157 aa20.52■□□□□ 0.88
SCRN1-203ENST00000409570 SMAD3P84022 425 aaKnown RBP20.51■□□□□ 0.87
SCRN1-203ENST00000409570 FAM47AQ5JRC9 791 aa20.51■□□□□ 0.87
SCRN1-203ENST00000409570 C1orf53Q5VUE5 145 aa20.51■□□□□ 0.87
SCRN1-203ENST00000409570 ABRAQ8N0Z2 381 aa20.51■□□□□ 0.87
SCRN1-203ENST00000409570 MB21D1Q8N884 522 aa20.51■□□□□ 0.87
SCRN1-203ENST00000409570 MYLIPQ8WY64 445 aa20.51■□□□□ 0.87
SCRN1-203ENST00000409570 FERMT2Q96AC1 680 aa20.51■□□□□ 0.87
SCRN1-203ENST00000409570 MROH8Q9H579 483 aa20.51■□□□□ 0.87
SCRN1-203ENST00000409570 MCM9Q9NXL9 1143 aa20.51■□□□□ 0.87
SCRN1-203ENST00000409570 PLS1Q14651 629 aa20.5■□□□□ 0.87
SCRN1-203ENST00000409570 NCAPG2Q86XI2 1143 aa20.5■□□□□ 0.87
SCRN1-203ENST00000409570 ATG4CQ96DT6 458 aa20.5■□□□□ 0.87
SCRN1-203ENST00000409570 MAML3Q96JK9 1138 aa20.5■□□□□ 0.87
SCRN1-203ENST00000409570 CRNKL1Q9BZJ0 848 aaKnown RBP20.5■□□□□ 0.87
SCRN1-203ENST00000409570 SLC5A4Q9NY91 659 aa20.5■□□□□ 0.87
SCRN1-203ENST00000409570 ITGB8P26012 769 aa20.49■□□□□ 0.87
SCRN1-203ENST00000409570 TLE2Q04725 743 aa20.49■□□□□ 0.87
SCRN1-203ENST00000409570 TMEM179Q6ZVK1 233 aa20.49■□□□□ 0.87
SCRN1-203ENST00000409570 AACSQ86V21 672 aa20.49■□□□□ 0.87
SCRN1-203ENST00000409570 SIAH1Q8IUQ4 282 aa20.49■□□□□ 0.87
SCRN1-203ENST00000409570 SLC44A5Q8NCS7 719 aa20.49■□□□□ 0.87
SCRN1-203ENST00000409570 FLOT1O75955 427 aa20.48■□□□□ 0.87
SCRN1-203ENST00000409570 CYP2D6P10635 497 aa20.48■□□□□ 0.87
SCRN1-203ENST00000409570 PDE6AP16499 860 aa20.48■□□□□ 0.87
SCRN1-203ENST00000409570 CLEC10AQ8IUN9 316 aa20.48■□□□□ 0.87
SCRN1-203ENST00000409570 SDR42E1Q8WUS8 393 aa20.48■□□□□ 0.87
SCRN1-203ENST00000409570 DCP1AQ9NPI6 582 aaPredicted RBP20.48■□□□□ 0.87
SCRN1-203ENST00000409570 PHF24Q9UPV7 400 aa20.48■□□□□ 0.87
SCRN1-203ENST00000409570 EXOC6BQ9Y2D4 811 aa20.48■□□□□ 0.87
SCRN1-203ENST00000409570 MYH7P12883 1935 aa20.47■□□□□ 0.87
SCRN1-203ENST00000409570 RLBP1P12271 317 aa20.47■□□□□ 0.87
SCRN1-203ENST00000409570 SLC9C2Q5TAH2 1124 aa20.47■□□□□ 0.87
SCRN1-203ENST00000409570 CEP85Q6P2H3 762 aa20.47■□□□□ 0.87
SCRN1-203ENST00000409570 ITPRIPQ8IWB1 547 aa20.47■□□□□ 0.87
SCRN1-203ENST00000409570 SPICE1Q8N0Z3 855 aa20.47■□□□□ 0.87
SCRN1-203ENST00000409570 DYNLL2Q96FJ2 89 aa20.47■□□□□ 0.87
SCRN1-203ENST00000409570 TMX2Q9Y320 296 aa20.47■□□□□ 0.87
SCRN1-203ENST00000409570 TCRBV5S4A2TA0A5A2 114 aa20.46■□□□□ 0.87
SCRN1-203ENST00000409570 FCER1AP12319 257 aa20.46■□□□□ 0.87
SCRN1-203ENST00000409570 EPHB4P54760 987 aa20.46■□□□□ 0.87
SCRN1-203ENST00000409570 TMEM132BQ14DG7 1078 aa20.46■□□□□ 0.87
SCRN1-203ENST00000409570 TTF1Q15361 905 aaPredicted RBP20.46■□□□□ 0.87
SCRN1-203ENST00000409570 LCORLQ8N3X6 602 aa20.46■□□□□ 0.87
SCRN1-203ENST00000409570 VCPKMTQ9H867 229 aa20.46■□□□□ 0.87
SCRN1-203ENST00000409570 SWAP70Q9UH65 585 aa20.46■□□□□ 0.87
SCRN1-203ENST00000409570 NRBP1Q9UHY1 535 aa20.46■□□□□ 0.87
SCRN1-203ENST00000409570 TACC3Q9Y6A5 838 aa20.46■□□□□ 0.87
SCRN1-203ENST00000409570 ZNF532Q9HCE3 1301 aa20.46■□□□□ 0.87
SCRN1-203ENST00000409570 CCER2I3L3R5 266 aa20.45■□□□□ 0.86
SCRN1-203ENST00000409570 CLTBP09497 229 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms