RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 USP17L19D6RCP7 530 aa23.48■■□□□ 1.35
PDLIM2-207ENST00000409417 USP17L20D6RJB6 530 aa23.48■■□□□ 1.35
PDLIM2-207ENST00000409417 NT5C2P49902 561 aa23.48■■□□□ 1.35
PDLIM2-207ENST00000409417 USP17L24Q0WX57 530 aa23.48■■□□□ 1.35
PDLIM2-207ENST00000409417 KIAA1755Q5JYT7 1200 aa23.48■■□□□ 1.35
PDLIM2-207ENST00000409417 MKL1Q969V6 931 aa23.48■■□□□ 1.35
PDLIM2-207ENST00000409417 GOPCQ9HD26 462 aa23.48■■□□□ 1.35
PDLIM2-207ENST00000409417 CLIP2Q9UDT6 1046 aa23.48■■□□□ 1.35
PDLIM2-207ENST00000409417 SYNPO2Q9UMS6 1093 aa23.48■■□□□ 1.35
PDLIM2-207ENST00000409417 BCRP11274 1271 aa23.47■■□□□ 1.35
PDLIM2-207ENST00000409417 GCLCP48506 637 aaPredicted RBP23.47■■□□□ 1.35
PDLIM2-207ENST00000409417 CATSPERGQ6ZRH7 1159 aa23.47■■□□□ 1.35
PDLIM2-207ENST00000409417 ERO1AQ96HE7 468 aa23.47■■□□□ 1.35
PDLIM2-207ENST00000409417 P2RX7Q99572 595 aaKnown RBP23.47■■□□□ 1.35
PDLIM2-207ENST00000409417 LSG1Q9H089 658 aaKnown RBP23.47■■□□□ 1.35
PDLIM2-207ENST00000409417 IL17RBQ9NRM6 502 aa23.47■■□□□ 1.35
PDLIM2-207ENST00000409417 SPICE1Q8N0Z3 855 aa23.46■■□□□ 1.35
PDLIM2-207ENST00000409417 ESR2Q92731 530 aa23.46■■□□□ 1.35
PDLIM2-207ENST00000409417 RPAP3Q9H6T3 665 aaPredicted RBP23.46■■□□□ 1.35
PDLIM2-207ENST00000409417 NEDD4P46934 1319 aa23.46■■□□□ 1.35
PDLIM2-207ENST00000409417 NMT2O60551 498 aa23.45■■□□□ 1.34
PDLIM2-207ENST00000409417 TCP11L1Q9NUJ3 509 aa23.45■■□□□ 1.34
PDLIM2-207ENST00000409417 CYP21A2P08686 494 aa23.44■■□□□ 1.34
PDLIM2-207ENST00000409417 HERVK_113P62684 666 aa23.44■■□□□ 1.34
PDLIM2-207ENST00000409417 LACTBP83111 547 aaPredicted RBP23.44■■□□□ 1.34
PDLIM2-207ENST00000409417 CNNM2Q9H8M5 875 aa23.44■■□□□ 1.34
PDLIM2-207ENST00000409417 ANO2Q9NQ90 1003 aa23.44■■□□□ 1.34
PDLIM2-207ENST00000409417 RBM8AQ9Y5S9 174 aaKnown RBP23.44■■□□□ 1.34
PDLIM2-207ENST00000409417 F5H6K3 240 aa23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 WDR46O15213 610 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 NOVP48745 357 aa23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 KLRC3Q07444 240 aa23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 CTU1Q7Z7A3 348 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 ANKRD13CQ8N6S4 541 aa23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 CD99L2Q8TCZ2 262 aa23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 GTF3C2Q8WUA4 911 aaPredicted RBP23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 KRT23Q9C075 422 aa23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 STX8Q9UNK0 236 aa23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 LAMA4Q16363 1823 aa23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 FAM110CQ1W6H9 321 aa23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 GMCL1P1Q8NEA9 526 aa23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 NKX2-3Q8TAU0 364 aa23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 TANGO6Q9C0B7 1094 aa23.43■■□□□ 1.34
PDLIM2-207ENST00000409417 RAD21O60216 631 aa23.42■■□□□ 1.34
PDLIM2-207ENST00000409417 KDM4AO75164 1064 aa23.42■■□□□ 1.34
PDLIM2-207ENST00000409417 COG2Q14746 738 aa23.42■■□□□ 1.34
PDLIM2-207ENST00000409417 KIF22Q14807 665 aa23.42■■□□□ 1.34
PDLIM2-207ENST00000409417 ARHGEF6Q15052 776 aa23.42■■□□□ 1.34
PDLIM2-207ENST00000409417 LRRC47Q8N1G4 583 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-207ENST00000409417 HOXC10Q9NYD6 342 aa23.42■■□□□ 1.34
PDLIM2-207ENST00000409417 B4E1Z4 1266 aa23.41■■□□□ 1.34
PDLIM2-207ENST00000409417 NDUFB10O96000 172 aa23.41■■□□□ 1.34
PDLIM2-207ENST00000409417 LBX2Q6XYB7 198 aa23.41■■□□□ 1.34
PDLIM2-207ENST00000409417 CAP1Q01518 475 aa23.4■■□□□ 1.34
PDLIM2-207ENST00000409417 TTC14Q96N46 770 aa23.4■■□□□ 1.34
PDLIM2-207ENST00000409417 EFCC1Q9HA90 598 aa23.4■■□□□ 1.34
PDLIM2-207ENST00000409417 RBPJLQ9UBG7 517 aa23.4■■□□□ 1.34
PDLIM2-207ENST00000409417 MORF4L1Q9UBU8 362 aa23.4■■□□□ 1.34
PDLIM2-207ENST00000409417 SPDYE16A6NNV3 312 aaPredicted RBP23.39■■□□□ 1.34
PDLIM2-207ENST00000409417 FLOT1O75955 427 aa23.39■■□□□ 1.34
PDLIM2-207ENST00000409417 TRDNQ13061 729 aa23.39■■□□□ 1.34
PDLIM2-207ENST00000409417 PKN2Q16513 984 aaKnown RBP23.39■■□□□ 1.34
PDLIM2-207ENST00000409417 FAM83BQ5T0W9 1011 aa23.39■■□□□ 1.34
PDLIM2-207ENST00000409417 POTEEQ6S8J3 1075 aa23.39■■□□□ 1.34
PDLIM2-207ENST00000409417 OTOP1Q7RTM1 612 aa23.39■■□□□ 1.34
PDLIM2-207ENST00000409417 IQCA1Q86XH1 822 aa23.39■■□□□ 1.34
PDLIM2-207ENST00000409417 ARHGAP39Q9C0H5 1083 aa23.39■■□□□ 1.34
PDLIM2-207ENST00000409417 TXNRD2Q9NNW7 524 aa23.39■■□□□ 1.34
PDLIM2-207ENST00000409417 ZSWIM5Q9P217 1185 aa23.39■■□□□ 1.34
PDLIM2-207ENST00000409417 PSMC4P43686 418 aa23.38■■□□□ 1.33
PDLIM2-207ENST00000409417 NECTIN1Q15223 517 aa23.38■■□□□ 1.33
PDLIM2-207ENST00000409417 CCDC178Q5BJE1 867 aa23.38■■□□□ 1.33
PDLIM2-207ENST00000409417 TNS4Q8IZW8 715 aa23.38■■□□□ 1.33
PDLIM2-207ENST00000409417 GPRC5AQ8NFJ5 357 aa23.38■■□□□ 1.33
PDLIM2-207ENST00000409417 RABGAP1Q9Y3P9 1069 aa23.38■■□□□ 1.33
PDLIM2-207ENST00000409417 TRIM17Q9Y577 477 aa23.38■■□□□ 1.33
PDLIM2-207ENST00000409417 TAF6LQ9Y6J9 622 aa23.38■■□□□ 1.33
PDLIM2-207ENST00000409417 E7EWF7 191 aa23.37■■□□□ 1.33
PDLIM2-207ENST00000409417 GNRH1P01148 92 aa23.37■■□□□ 1.33
PDLIM2-207ENST00000409417 TOP1P11387 765 aaKnown RBP23.37■■□□□ 1.33
PDLIM2-207ENST00000409417 SLFN13Q68D06 897 aa23.37■■□□□ 1.33
PDLIM2-207ENST00000409417 RCSD1Q6JBY9 416 aa23.37■■□□□ 1.33
PDLIM2-207ENST00000409417 DGKHQ86XP1 1220 aa23.37■■□□□ 1.33
PDLIM2-207ENST00000409417 TRIM47Q96LD4 638 aa23.37■■□□□ 1.33
PDLIM2-207ENST00000409417 NUP88Q99567 741 aaPredicted RBP23.37■■□□□ 1.33
PDLIM2-207ENST00000409417 MYPNQ86TC9 1320 aa23.37■■□□□ 1.33
PDLIM2-207ENST00000409417 SLC27A2O14975 620 aa23.36■■□□□ 1.33
PDLIM2-207ENST00000409417 CTGFP29279 349 aa23.36■■□□□ 1.33
PDLIM2-207ENST00000409417 DSG3P32926 999 aa23.36■■□□□ 1.33
PDLIM2-207ENST00000409417 CREB3L3Q68CJ9 461 aa23.36■■□□□ 1.33
PDLIM2-207ENST00000409417 GMCL1Q96IK5 515 aa23.36■■□□□ 1.33
PDLIM2-207ENST00000409417 ZSCAN10Q96SZ4 725 aaPredicted RBP23.36■■□□□ 1.33
PDLIM2-207ENST00000409417 TMEM47Q9BQJ4 181 aa23.36■■□□□ 1.33
PDLIM2-207ENST00000409417 MCOLN1Q9GZU1 580 aa23.36■■□□□ 1.33
PDLIM2-207ENST00000409417 MYH4Q9Y623 1939 aa23.36■■□□□ 1.33
PDLIM2-207ENST00000409417 FMNL1O95466 1100 aaPredicted RBP23.36■■□□□ 1.33
PDLIM2-207ENST00000409417 FCGRTP55899 365 aa23.36■■□□□ 1.33
PDLIM2-207ENST00000409417 ERVK-9P63128 1117 aa23.36■■□□□ 1.33
PDLIM2-207ENST00000409417 ERVK-24P63145 666 aa23.36■■□□□ 1.33
PDLIM2-207ENST00000409417 STOX1Q6ZVD7 989 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms